FC930953

Overview
NameFC930953
Unique NameFC930953
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length693
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10622 contig Ccv1_Contig10622:208..900. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.725e-28
Identity = 71/211 (33.65%), Postives = 110/211 (52.13%), Query Frame = 1
Query:   85 IVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGA-----YPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLTL 693
            IV     G D++D++E  RRGI VTN  +  ++  A                     R+G W   G      + LG  + GK +GIVG G IG  VA+R   FG  I Y SR +KP         + ++  L  +SD +++   LT+ET +MIN++ +  + K  +++N+ RG ++D K L+  L  G + GAGLDV+E+EP+  +EL +L
Sbjct:   70 IVANYAVGYDNIDVEEATRRGIYVTNTPDVLTDATADFAWTLLLATARRLIEADHFTRSGEWKRRGIAWHPRWFLGYDVYGKTIGIVGFGRIGQAVARRARGFGMRILYYSRSRKPEAEKELGAEFRSLEDLLRESDFVVLAVPLTKETQYMINEERLRLMKKTAILVNIARGKVVDTKALMKALKEGWIAGAGLDVYEEEPYYNEELFSL 280          
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 9.766e-28
Identity = 72/211 (34.12%), Postives = 107/211 (50.71%), Query Frame = 1
Query:   85 IVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGA-----YPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYAN---VSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLTL 693
            IV     G D++D++E  +RGI VTN  +  ++  A                     R+G W   G      + LG  + GK +GI+GLG IG  +AKR   F   I Y SR +K  V     A    +  L  +SD +++   LT ET+H+IN++ +  + K  ++IN+ RG ++D   LV  L  G + GAGLDVFE+EP+  +EL  L
Sbjct:   70 IVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKL 280          
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 9.766e-28
Identity = 72/211 (34.12%), Postives = 108/211 (51.18%), Query Frame = 1
Query:   85 IVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGA-----YPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYAN---VSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLTL 693
            IV     G D++D++E  +RGI VTN     ++  A                     R+G W   G      + LG  + GK +GI+G G IG  +AKR   F   I Y SR +KP V     A    +  L  +SD +++   L +ET+HMIN++ +  + +  ++INV RG +ID K L+  L  G + GAGLDV+E+EP+  +EL +L
Sbjct:   71 IVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSL 281          
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27
Identity = 69/212 (32.55%), Postives = 110/212 (51.89%), Query Frame = 1
Query:   82 EIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGA--YPL---GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYAN---VSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLTL 693
            +IV     G D++D++E  + G+ +TN  +  +   A                     R+G W   G   +PL   G  + G+ +GIVG G IG  +A+R   FG  I Y SR +KP V     A    +  L  +SD +++   LT+ET+HMIN++ +  +    +++N+ RG ++D + LV  L  G + GAGLDVFE+EP+  +EL +L
Sbjct:   69 KIVANYAVGYDNIDIEEATKMGVYITNTPDVLTNATADMAWVLLLATARRLIEADKFVRSGEWKKRGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIARRAKGFGMRILYNSRTRKPEVEKELGAEFMPLDELLKESDFVVLVVPLTKETYHMINEERLKLMKPTAILVNIARGKVVDTEALVKALREGWIAGAGLDVFEEEPYYHEELFSL 280          
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.267e-27
Identity = 72/211 (34.12%), Postives = 107/211 (50.71%), Query Frame = 1
Query:   85 IVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGA--YPL---GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYAN---VSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLTL 693
            IV     G D+VD++E  RRGI VTN  +  +   A                     R+G W   G   +PL   G  + GK +GI+G G IG  VA+R   FG  I Y SR +KP       A    +  L  +SD +++   LT+ET+HMI +  +  +    +++N+ RG ++D + L+  L  G + GAGLDVFE+EP+  +EL +L
Sbjct:   70 IVANYAVGYDNVDVEEATRRGIYVTNTPDVLTNATADFAWTLLLATARRLIEADSFTRSGEWKRKGIAWHPLMFLGHDVYGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPEAEEELKAEFKPLEELLKESDFVVLAVPLTKETYHMIGERELKLMKPTAILVNIARGKVVDTEALIKALKEGWIAGAGLDVFEEEPYYNEELFSL 280          
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.842e-26
Identity = 73/212 (34.43%), Postives = 106/212 (50.00%), Query Frame = 1
Query:   82 EIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWP--DHGAYPL---GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLTL 693
            +I+     G D++D++E  +RGI VTN     ++  A                     R+G W   + G +PL   G  L GK +GIVG G IG  +AKR   FG  I Y SR +KP         Y +   L  +SD + +   LT+ET+HMI +  +  +    ++IN  RGA++D   L+  L  G + GAGLDVFE+EP+  +EL  L
Sbjct:   69 KIIAQYAVGYDNIDIEEATKRGIYVTNTPGVLTDATADLAFALLLAVARRIVEADAFVRSGEWKKSEVGWHPLMFLGYGLKGKTLGIVGFGRIGQALAKRAKGFGMKIIYYSRTRKPEAEEEIGAEYVDFETLLKESDFISLHVPLTKETYHMIGEKELKLMKPNAILINTSRGAVVDTNALIKALKEGWIAGAGLDVFEEEPYYNEELFKL 280          
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.140e-26
Identity = 70/211 (33.18%), Postives = 105/211 (49.76%), Query Frame = 1
Query:   85 IVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPD-----HGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLTL 693
            IV     G D++D++E  RRGI VTN  +  +   A                     R+G W       H  + LG  L GK +GIVG G IG  +A+R   F   I Y SR +K          Y  +  +  +SD +I+   LT+ET +MIN++ +  +    +++N+ RG ++D K L+  L  G + GAGLDVFE+EP+  +EL +L
Sbjct:   70 IVANYAVGYDNIDVEEATRRGIYVTNTPDVLTNATADHAFALLLATARHVVKGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTIGIVGFGRIGQAIARRAKGFNMRILYYSRTRKSQAEKELGAEYRPLEEVLKESDFVILAVPLTKETMYMINEERLKLMKPTAILVNIARGKVVDTKALIKALKEGWIAGAGLDVFEEEPYYNEELFSL 280          
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: GYAR_KORCO (Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8) GN=gyaR PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.906e-23
Identity = 70/209 (33.49%), Postives = 102/209 (48.80%), Query Frame = 1
Query:   85 IVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPD--HGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSR------KKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELL 687
            IV     G D++D++E  +RGI VTN     +E  A                     R G W    H    LG  + G+ +GIVG+G IG+ VA+R   FG  I Y         +K+ GV Y     +  L  +SD + +   LTEET+HMI ++ +  + +  +++N  RG ++D+K L   L  G + GAGLDVFE EP  P + L
Sbjct:   70 IVAQYAVGYDNIDVKEATKRGIYVTNTPGVLTETTADFAFALLMAAARRVVEADRYVREGKWKVAWHPMMMLGYDVYGRTLGIVGMGRIGAAVARRAKGFGMRILYYDSIRREDFEKELGVEY---VPLEKLLEESDFVSLHVPLTEETYHMIGEEQLRRMKRTAILVNTSRGKVVDQKALYKALKEGWIAGAGLDVFEQEPIPPDDPL 275          
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: GYAR_THEPD (Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.545e-23
Identity = 69/230 (30.00%), Postives = 105/230 (45.65%), Query Frame = 1
Query:   19 AILCXXXXXXXXXXXXXXXXXEIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLW--PDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPF----YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLT 690
            A+LC                 +++   + G DH+D+ E  +RGI VT+     ++  A                     R G W  P +  +  G  L GK +G+VGLG IG   AKRL  F   I Y   +++  V        + ++  L   SD++ +   LT+ET+H+IN++ +  + K   +IN  RG ++D + LV  L  G + GA LDVFE EP  P   LT
Sbjct:   50 ALLCLLTDKIDAEVMDAAPNLKVISTYSVGFDHIDIPEATKRGIYVTHTPGVLTDAVAEFTVGLILAVTRRIVEADKIIRTGQWDKPWNPYFLTGPELKGKTIGLVGLGRIGVATAKRLSSFDVKILYYDIERRWDVETVIPNMEFTDLDTLLEKSDIVSIHVPLTKETYHLINEERLRKMKKTAYLINTARGPVVDTEALVKALKEGWIAGAALDVFEQEPLPPNHPLT 279          
BLAST of FC930953 vs. ExPASy Swiss-Prot
Match: GYAR_AERPE (Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.545e-23
Identity = 71/210 (33.81%), Postives = 99/210 (47.14%), Query Frame = 1
Query:   85 IVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPD-----HGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHVPKELLT 690
            IV     G D++D++   R GI VTN     +E  A                     R G W       H    LG  L GK +GI+G+G IGS VA+    FG  I Y SR +K  +       Y ++  L  +SD+L +   LT+ET H+I +  +  + K  +++N GRGA++D   LV  L  G +  A LDVFE+EP  P   LT
Sbjct:   71 IVAQMAVGFDNIDVECATRLGIYVTNTPGVLTEATAEFTWALILAAARRVVEADHFVRWGEWWRLRTGWHPMMMLGVELRGKTLGILGMGRIGSRVAEIGKAFGMRIIYHSRSRKREIEKELGAEYRSLEDLLRESDILSIHLPLTDETRHLIGESELKLMKKTAILVNTGRGAIVDTGALVKALREGWIAAAALDVFEEEPLNPNHPLT 280          
The following BLAST results are available for this feature:
BLAST of FC930953 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
GYAR_PYRKO5.725e-2833.65Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_PYRHO9.766e-2834.12Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]
GYAR_PYRAB9.766e-2834.12Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
GYAR_THEON4.847e-2732.55Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_THEGJ8.267e-2734.12Glyoxylate reductase OS=Thermococcus gammatolerans... [more]
GYAR_THELI1.842e-2634.43Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
GYAR_PYRFU9.140e-2633.18Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
GYAR_KORCO1.906e-2333.49Glyoxylate reductase OS=Korarchaeum cryptofilum (s... [more]
GYAR_THEPD5.545e-2330.00Glyoxylate reductase OS=Thermofilum pendens (strai... [more]
GYAR_AERPE5.545e-2333.81Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR P... [more]

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Properties
Property NameValue
Genbank descriptionC34110G10EF PostHarvP1 Citrus clementina cDNA clone C34110G10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930953 ID=FC930953; Name=FC930953; organism=Citrus clementina; type=EST; length=693bp
CACGCCAGCTCCGTACGCGCCATTCTCTGCTTGGGCCCCTCTCCCCTCAC
CTCCGACACCCTCTCCCTCCTCCCGGCGTTGGAAATCGTCGTGGGGTCCA
CCGCAGGCATCGACCATGTTGACCTGCAGGAGTGCCGCCGACGCGGCATT
CTTGTGACTAATGCTGGTAACGCCTTCTCTGAGGACGGTGCTGATTATGT
GGTCGGTTTGTTGGTTGATGTTCTCAGGAGGGTTTCCAGCAGTGATCGGT
TTGTTCGGAACGGGTTGTGGCCCGATCATGGGGCCTACCCACTTGGGTCA
ACGTTGGGAGGAAAGCGAGTTGGGATTGTGGGGTTGGGTAGCATAGGCTC
TGAAGTTGCAAAAAGGCTTGTGCCCTTCGGCTGTAGCATTGCTTACACAT
CAAGAAAGAAAAAGCCAGGTGTTTCGTATCCTTTTTATGCAAATGTTTCT
GGCCTTGCTGCTGATAGTGATGTCCTCATTGTGTGTTGTGCTCTGACCGA
GGAAACTCACCACATGATTAACAAGGATGTCATGACAGCACTGGGCAAGG
AAGGGGTGATAATAAATGTTGGGCGCGGTGCTCTTATTGATGAGAAGGAA
CTGGTTCACTTCTTGGTGCGGGGGGAGCTTGGTGGAGCTGGTCTTGATGT
GTTTGAAGACGAGCCTCATGTGCCCAAGGAGCTGCTTACATTG
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