FC930957
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930957 vs. ExPASy Swiss-Prot
Match: ATPA_NEUCR (ATP synthase subunit alpha, mitochondrial OS=Neurospora crassa GN=atp-1 PE=3 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 4.702e-70 Identity = 138/161 (85.71%), Postives = 146/161 (90.68%), Query Frame = 2 Query: 125 TGRIASVRAAVAGPLNGVRSYASEAKATPTEVSSILEQRIRGVSEEAGLAETGRVLSVGDGIARVHGMTNVQAEELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIVEVPVGPELLGRVVDALGNPIDGKGPLNTKEKRRAQLKAPGIL 607 TGR+A+ AA R+YA +AKATPTEVSSILEQRIRGV EE+ LAETGRVLSVGDGIARVHGM NVQAEELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIV+VPVGPELLGRV+DALGNPIDGKGP+N KEKRRAQLKAPGIL Sbjct: 19 TGRVAARNAAPVVSAVQARTYA-DAKATPTEVSSILEQRIRGVQEESNLAETGRVLSVGDGIARVHGMANVQAEELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIVDVPVGPELLGRVIDALGNPIDGKGPINCKEKRRAQLKAPGIL 178
BLAST of FC930957 vs. ExPASy Swiss-Prot
Match: ATPA_KLULA (ATP synthase subunit alpha, mitochondrial OS=Kluyveromyces lactis GN=ATP1 PE=1 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 4.129e-58 Identity = 120/159 (75.47%), Postives = 134/159 (84.28%), Query Frame = 2 Query: 131 RIASVRAAVAGPLNGVRSYASEAKATPTEVSSILEQRIRGVSEEAGLAETGRVLSVGDGIARVHGMTNVQAEELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIVEVPVGPELLGRVVDALGNPIDGKGPLNTKEKRRAQLKAPGIL 607 R+A VAG R +AS AKA PTEVSSILE+RIRGVSEE+ L ETGRVL+VGDGIARV G+ NVQAEELVEF+SGVKGM +NLE GQVG+VLFGSDRLVKEGE VKRTG+IV+V VGPELLGRVVDALGNPIDGKGP+N + RAQ+KAPGIL Sbjct: 25 RVARPALVVAG-----RRFAS-AKAQPTEVSSILEERIRGVSEESNLNETGRVLAVGDGIARVFGLNNVQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGEVVKRTGKIVDVGVGPELLGRVVDALGNPIDGKGPINASGRSRAQVKAPGIL 177
BLAST of FC930957 vs. ExPASy Swiss-Prot
Match: ATPA_YEAST (ATP synthase subunit alpha, mitochondrial OS=Saccharomyces cerevisiae GN=ATP1 PE=1 SV=3) HSP 1 Score: 218.394 bits (555), Expect = 2.265e-56 Identity = 117/160 (73.12%), Postives = 132/160 (82.50%), Query Frame = 2 Query: 134 IASVRAA--VAGPLNGVRSYASEAKATPTEVSSILEQRIRGVSEEAGLAETGRVLSVGDGIARVHGMTNVQAEELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIVEVPVGPELLGRVVDALGNPIDGKGPLNTKEKRRAQLKAPGIL 607 I S +AA A L R AS KA PTEVSSILE+RI+GVS+EA L ETGRVL+VGDGIARV G+ N+QAEELVEF+SGVKGM +NLE GQVG+VLFGSDRLVKEGE VKRTG IV+VPVGP LLGRVVDALGNPIDGKGP++ + RAQ+KAPGIL Sbjct: 16 INSTKAARPAAAALASTRRLAS-TKAQPTEVSSILEERIKGVSDEANLNETGRVLAVGDGIARVFGLNNIQAEELVEFSSGVKGMALNLEPGQVGIVLFGSDRLVKEGELVKRTGNIVDVPVGPGLLGRVVDALGNPIDGKGPIDAAGRSRAQVKAPGIL 174
BLAST of FC930957 vs. ExPASy Swiss-Prot
Match: ATPA_SCHPO (ATP synthase subunit alpha, mitochondrial OS=Schizosaccharomyces pombe GN=atp1 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.286e-51 Identity = 103/143 (72.03%), Postives = 119/143 (83.22%), Query Frame = 2 Query: 179 RSYASEAKATPTEVSSILEQRIRGVSEEAGLAETGRVLSVGDGIARVHGMTNVQAEELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIVEVPVGPELLGRVVDALGNPIDGKGPLNTKEKRRAQLKAPGIL 607 R YA KA PTEV SILE+RIRG +A + E+GRVLS+GDGIAR+ G++NVQAEELVEF+SG+KGM +NLEA VG VLFG+DRLV+EGE VKRT IV+VPVG LLGRVVDALGNPIDGKGP+ T E+RR QLKAPGIL Sbjct: 25 RGYAE--KAAPTEVPSILEERIRGAYNQAQMMESGRVLSIGDGIARISGLSNVQAEELVEFSSGIKGMALNLEADTVGCVLFGNDRLVREGEVVKRTRHIVDVPVGEALLGRVVDALGNPIDGKGPIKTTERRRVQLKAPGIL 165
BLAST of FC930957 vs. ExPASy Swiss-Prot
Match: ATPA_BOVIN (ATP synthase subunit alpha, mitochondrial OS=Bos taurus GN=ATP5A1 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.127e-47 Identity = 94/136 (69.12%), Postives = 111/136 (81.62%), Query Frame = 2 Query: 200 KATPTEVSSILEQRIRGVSEEAGLAETGRVLSVGDGIARVHGMTNVQAEELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIVEVPVGPELLGRVVDALGNPIDGKGPLNTKEKRRAQLKAPGIL 607 K EVSSILE+RI G L ETGRVLS+GDGIARVHG+ NVQAEE+VEF+SG+KGM +NLE VGVV+FG+D+L+KEG+ VKRTG IV+VPVG ELLGRVVDALGN IDGKGP+ +K +RR LKAPGI+ Sbjct: 45 KTGTAEVSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKARRRVGLKAPGII 180
BLAST of FC930957 vs. ExPASy Swiss-Prot
Match: ATPA_PONAB (ATP synthase subunit alpha, mitochondrial OS=Pongo abelii GN=ATP5A1 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.922e-47 Identity = 93/136 (68.38%), Postives = 112/136 (82.35%), Query Frame = 2 Query: 200 KATPTEVSSILEQRIRGVSEEAGLAETGRVLSVGDGIARVHGMTNVQAEELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIVEVPVGPELLGRVVDALGNPIDGKGPLNTKEKRRAQLKAPGIL 607 K E+SSILE+RI G L ETGRVLS+GDGIARVHG+ NVQAEE+VEF+SG+KGM +NLE VGVV+FG+D+L+KEG+ VKRTG IV+VPVG ELLGRVVDALGN IDGKGP+++K +RR LKAPGI+ Sbjct: 45 KTGTAEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPISSKTRRRVGLKAPGII 180
BLAST of FC930957 vs. ExPASy Swiss-Prot
Match: ATPA_MOUSE (ATP synthase subunit alpha, mitochondrial OS=Mus musculus GN=Atp5a1 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.922e-47 Identity = 93/136 (68.38%), Postives = 111/136 (81.62%), Query Frame = 2 Query: 200 KATPTEVSSILEQRIRGVSEEAGLAETGRVLSVGDGIARVHGMTNVQAEELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIVEVPVGPELLGRVVDALGNPIDGKGPLNTKEKRRAQLKAPGIL 607 K E+SSILE+RI G L ETGRVLS+GDGIARVHG+ NVQAEE+VEF+SG+KGM +NLE VGVV+FG+D+L+KEG+ VKRTG IV+VPVG ELLGRVVDALGN IDGKGP+ +K +RR LKAPGI+ Sbjct: 45 KTGTAEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDVVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII 180
BLAST of FC930957 vs. ExPASy Swiss-Prot
Match: ATPA_PANTR (ATP synthase subunit alpha, mitochondrial OS=Pan troglodytes GN=ATP5A1 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.511e-47 Identity = 93/136 (68.38%), Postives = 111/136 (81.62%), Query Frame = 2 Query: 200 KATPTEVSSILEQRIRGVSEEAGLAETGRVLSVGDGIARVHGMTNVQAEELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIVEVPVGPELLGRVVDALGNPIDGKGPLNTKEKRRAQLKAPGIL 607 K E+SSILE+RI G L ETGRVLS+GDGIARVHG+ NVQAEE+VEF+SG+KGM +NLE VGVV+FG+D+L+KEG+ VKRTG IV+VPVG ELLGRVVDALGN IDGKGP+ +K +RR LKAPGI+ Sbjct: 45 KTGTAEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII 180
BLAST of FC930957 vs. ExPASy Swiss-Prot
Match: ATPA_HUMAN (ATP synthase subunit alpha, mitochondrial OS=Homo sapiens GN=ATP5A1 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.511e-47 Identity = 93/136 (68.38%), Postives = 111/136 (81.62%), Query Frame = 2 Query: 200 KATPTEVSSILEQRIRGVSEEAGLAETGRVLSVGDGIARVHGMTNVQAEELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIVEVPVGPELLGRVVDALGNPIDGKGPLNTKEKRRAQLKAPGIL 607 K E+SSILE+RI G L ETGRVLS+GDGIARVHG+ NVQAEE+VEF+SG+KGM +NLE VGVV+FG+D+L+KEG+ VKRTG IV+VPVG ELLGRVVDALGN IDGKGP+ +K +RR LKAPGI+ Sbjct: 45 KTGTAEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGEELLGRVVDALGNAIDGKGPIGSKTRRRVGLKAPGII 180
BLAST of FC930957 vs. ExPASy Swiss-Prot
Match: ATPA_RAT (ATP synthase subunit alpha, mitochondrial OS=Rattus norvegicus GN=Atp5a1 PE=1 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 5.593e-47 Identity = 93/136 (68.38%), Postives = 111/136 (81.62%), Query Frame = 2 Query: 200 KATPTEVSSILEQRIRGVSEEAGLAETGRVLSVGDGIARVHGMTNVQAEELVEFASGVKGMCMNLEAGQVGVVLFGSDRLVKEGETVKRTGEIVEVPVGPELLGRVVDALGNPIDGKGPLNTKEKRRAQLKAPGIL 607 K E+SSILE+RI G L ETGRVLS+GDGIARVHG+ NVQAEE+VEF+SG+KGM +NLE VGVV+FG+D+L+KEG+ VKRTG IV+VPVG ELLGRVVDALGN IDGKGP+ +K +RR LKAPGI+ Sbjct: 45 KTGTAEMSSILEERILGADTSVDLEETGRVLSIGDGIARVHGLRNVQAEEMVEFSSGLKGMSLNLEPDNVGVVVFGNDKLIKEGDIVKRTGAIVDVPVGDELLGRVVDALGNAIDGKGPVGSKIRRRVGLKAPGII 180 The following BLAST results are available for this feature:
BLAST of FC930957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930957 ID=FC930957; Name=FC930957; organism=Citrus clementina; type=EST; length=609bpback to top |