FC930962

Overview
NameFC930962
Unique NameFC930962
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length766
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15241 contig Ccv1_Contig15241:1..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.705e-87
Identity = 161/208 (77.40%), Postives = 183/208 (87.98%), Query Frame = 2
Query:   89 MGSTSSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLKITKGLKA-HSVVDV 709
            MGST SETQ++P Q SDEEANL AMQL SASVLPMVLK+AIELDLLEI+AKAGP AF+SP ++A+QLPT+NP+A ++LDRI RLLASYSVL C+LRNLPDGKVERLYGLAPVCKFL KNEDGV+++ L LMNQDK+LMESWYYLKDAVLEGGIPFNKA+GM AF+YHG D RFNKIFN GMS HSTITMKK L+  KG +   +VVDV
Sbjct:    1 MGSTGSETQMTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPGEVAAQLPTQNPEAPVMLDRIFRLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVKNEDGVSIAALNLMNQDKILMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKIFNRGMSDHSTITMKKILETYKGFEGLETVVDV 208          
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 8.459e-87
Identity = 161/208 (77.40%), Postives = 183/208 (87.98%), Query Frame = 2
Query:   89 MGSTSSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLKITKGLKA-HSVVDV 709
            MGST  ETQ++P Q SDEEA+L AMQL SASVLPM+LK+AIELDLLEI+AKAGP AF+S  +IAS LPTKNPDA ++LDRILRLLASYS+L CSL++LPDGKVERLYGLAPVCKFLTKNEDGV++S LCLMNQDKVLMESWYYLKDA+LEGGIPFNKA+GM AF+YHG D RFNK+FN GMS HSTITMKK L+  KG +   S+VDV
Sbjct:    1 MGSTG-ETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDV 207          
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.885e-86
Identity = 160/208 (76.92%), Postives = 183/208 (87.98%), Query Frame = 2
Query:   89 MGSTSSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLKITKGLKA-HSVVDV 709
            MGST  ETQ++P Q SDEEA+L AMQL SASVLPM+LK+AIELDLLEI+AKAGP AF+S  +IAS LPTKNPDA ++LDRILRLLASYS+L CSL++LPDGKVERLYGLAPVCKFLTKNEDGV++S LCLMNQDKVLMESWYYLKDA+L+GGIPFNKA+GM AF+YHG D RFNK+FN GMS HSTITMKK L+  KG +   S+VDV
Sbjct:    1 MGSTG-ETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDV 207          
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.222e-85
Identity = 159/208 (76.44%), Postives = 182/208 (87.50%), Query Frame = 2
Query:   89 MGSTSSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLKITKGLKA-HSVVDV 709
            MGST  ETQ++P Q SDEEANL AMQL SASVLPMVLK+AIELDLLEI+AKAGP AF+SP D+ASQLPTKNP+A ++LDR+LRLLASYS+L  SLR LPDGKVERLYGL PVCKFLTKNEDGV+++ LCLMNQDKVL+ESWY+LKDAVL+GGIPFNKA+GM AFDYHG D RFNK+FN GM+ HSTITMKK L+  KG +   S+VDV
Sbjct:    1 MGSTG-ETQMTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDV 207          
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 1.351e-84
Identity = 159/208 (76.44%), Postives = 180/208 (86.54%), Query Frame = 2
Query:   89 MGSTSSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLKITKGLKA-HSVVDV 709
            MGST  ETQ++P Q SDEEANL AMQL SASVLPMVLK+AIELDLLEI+AKAGP  F+SP DIASQLPTKNPDA ++LDR+LRLLASYS+L  SLR L DGKVERLYGL PVCKFLTKNE+GV+++ LCLMNQDKVL+ESWY+LKDAVLEGGIPFNKA+GM AF+YHG D RFNK+FN GM+ HSTITMKK L+  KG +   SVVDV
Sbjct:    1 MGSTG-ETQMTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTKNPDAPVMLDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDV 207          
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 3.327e-83
Identity = 155/212 (73.11%), Postives = 184/212 (86.79%), Query Frame = 2
Query:   89 MGST-SSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKA---GPDAFMSPKDIASQLPTKNPDAHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLKITKGLKA-HSVVDV 709
            MGST ++ETQ++P   SDEEANL AMQL SASVLPMVLK+AIELD+LEI+AK+   G  A++SP +IA+QLPT NPDA ++LDR+LRLLASYSV+ CSLR LPDGKVERLYGLAPVCKFLTKNEDGV+L+ LCLMNQDKVLMESWYYLKDA+L+GGIPFNKA+GM AF+YHG D RFNK+FN GMS HSTITMKK  ++  G +A +++VDV
Sbjct:    1 MGSTGNAETQLTPTHVSDEEANLFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLPTTNPDAPVMLDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDV 212          
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.264e-82
Identity = 159/208 (76.44%), Postives = 179/208 (86.06%), Query Frame = 2
Query:   89 MGSTSSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLKITKGLKA-HSVVDV 709
            MGST  ETQ+SPAQ  DEEAN  AMQL S+SVLPMVLK+AIELDLLEI+AKAGP A +SP DIAS LPTKNPDA ++LDRILRLLASYS+L CSLR+LPDGKVERLYGLA VCKFLTKNEDGV++S LCLMNQDKVLMESWY+LKDA+LEGGIPFNKA+GM AF+YHG D RFNK+FN GMS HS + MKK L+  KG +   S+VDV
Sbjct:    1 MGSTG-ETQMSPAQILDEEANF-AMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDV 206          
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.183e-80
Identity = 155/208 (74.52%), Postives = 178/208 (85.58%), Query Frame = 2
Query:   89 MGSTSSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLKITKGLKA-HSVVDV 709
            MGST  ETQ+SPAQ  DEEAN  A+QL S+SVLPMVLK+AIELDLLEI+AKAGP A + P DIAS LPTKNP+A ++LDRILRLLASYS+L CSLR+LPDGKVERLYGLA VCKFLT+NEDGV++S LCLMNQDKVLMESWY+LKDA+LEGGIPFNKA+GM AF+YHG D RFNK+FN GMS HS + MKK L+  KG +   S+VDV
Sbjct:    1 MGSTG-ETQMSPAQILDEEANF-ALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKGFEGLASLVDV 206          
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 2.467e-78
Identity = 147/208 (70.67%), Postives = 179/208 (86.06%), Query Frame = 2
Query:   89 MGSTSSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLKITKGLKA-HSVVDV 709
            MGS + + + S  +  +EEA L AM+L SASVLPMVLKSAIELDLLE+I K+GP A++SP ++A+QLPT+NPDA ++LDRILRLLASYSVLNC+L++LPDG +ERLY LAPVCKFLTKNEDGV+++ L LMNQDKVLMESWY+LKDAVLEGGIPFNKA+GM AF+YHGKD RFNK+FN GMS+HSTI MKK L+I +G +   +VVDV
Sbjct:    1 MGSANPDNKNSMTK-EEEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDV 207          
BLAST of FC930962 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 2.088e-77
Identity = 150/208 (72.12%), Postives = 172/208 (82.69%), Query Frame = 2
Query:   89 MGSTSSETQISPAQGSDEEANLLAMQLTSASVLPMVLKSAIELDLLEIIAKAGPDAFMSPKDIASQLPTKNPDAHIVLDRILRLLASYSVLNCSLRNLPDGKVERLYGLAPVCKFLTKNEDGVTLSDLCLMNQDKVLMESWYYLKDAVLEGGIPFNKAHGMNAFDYHGKDLRFNKIFNNGMSSHSTITMKKFLKITKGLKA-HSVVDV 709
            MGST  ETQI+P   SDEEANL AMQL SASVLPM+LKSA+ELDLLEIIAKAGP A +SP +IASQLPT NPDA ++LDR+LRLLA Y +L CS+R   DGKV+RLYGLA V K+L KNEDGV++S L LMNQDKVLMESWY+LKDAVL+GGIPFNKA+GM AF+YHG D RFNK+FN GMS HSTITMKK L+   G +   S+VDV
Sbjct:    1 MGSTG-ETQITPTHISDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDV 207          
The following BLAST results are available for this feature:
BLAST of FC930962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
COMT1_EUCGU1.705e-8777.40Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_POPKI8.459e-8777.40Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_POPTM1.885e-8676.92Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_ROSCH1.222e-8576.44Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_PRUDU1.351e-8476.44Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_CLABR3.327e-8373.11Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT3_POPKI1.264e-8276.44Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT2_POPTM1.183e-8074.52Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_CATRO2.467e-7870.67Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_MEDSA2.088e-7772.12Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]

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Properties
Property NameValue
Genbank descriptionC34110H08EF PostHarvP1 Citrus clementina cDNA clone C34110H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930962 ID=FC930962; Name=FC930962; organism=Citrus clementina; type=EST; length=766bp
GACTCCGTGCCATTACTCAAATTGAAGGCTTCATTAATTTCTCTTCCCCG
AAAAAAGAAGGAAAAGAGGGAGAAAAAAAAAGCACAAAATGGGTTCAACC
AGTTCAGAAACTCAAATAAGTCCAGCCCAAGGCTCGGATGAAGAGGCAAA
CCTCTTGGCCATGCAATTAACCAGTGCCTCAGTCTTGCCTATGGTTCTCA
AATCAGCCATTGAGCTTGATCTTTTAGAGATCATCGCTAAAGCTGGGCCA
GATGCTTTCATGTCTCCAAAAGACATAGCTTCTCAGCTGCCCACAAAGAA
CCCAGATGCCCATATCGTGCTTGATCGTATATTGCGCCTTCTGGCGAGCT
ATTCAGTCCTTAATTGCTCTTTGCGCAATCTCCCCGACGGCAAAGTTGAG
AGGCTTTATGGCCTTGCCCCCGTTTGTAAATTCCTCACTAAAAATGAAGA
TGGTGTTACACTTTCCGATCTTTGTCTCATGAACCAAGACAAGGTTCTCA
TGGAGAGCTGGTACTACTTAAAAGATGCAGTGCTTGAAGGTGGCATTCCA
TTTAACAAGGCCCATGGGATGAATGCATTCGATTACCATGGCAAAGATCT
AAGATTCAACAAGATTTTCAACAATGGAATGTCTTCTCATTCTACCATTA
CCATGAAGAAATTCTTGAAAATTACAAAGGGTTTGAAGGCTCACTCAGTT
GTCGACGTGGTGGTGGAATGGAGCACACTTACATGATATCTCCAGTATCA
TCGATAAGGCATCACT
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