FC930975

Overview
NameFC930975
Unique NameFC930975
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig879 contig Ccv1_Contig879:19..689. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: S6PD_MALDO (NADP-dependent D-sorbitol-6-phosphate dehydrogenase OS=Malus domestica GN=S6PDH PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.581e-80
Identity = 135/206 (65.53%), Postives = 169/206 (82.04%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            +TL++G++MP+IGLG+WR+++  ++++I+NAIKIGYRH DCAA Y++EA+VGEALAEAF TGLVKRE+LFITTK+WNSDHGHV+EACK+S             VH+P+ TKH  +G T S L  D VL+ID TISL+ TW  ME  VS+GLVRSIG+SNY++FLTRDCLAYSK+KP V+QFETHPYFQRDSLVKFC KHG+  TAH
Sbjct:    4 VTLSSGYEMPVIGLGLWRLEKDELKEVILNAIKIGYRHFDCAAHYKSEADVGEALAEAFKTGLVKREELFITTKIWNSDHGHVVEACKNSLEKLQIDYLDLYLVHYPMPTKHNAIGKTASLLGEDKVLDIDVTISLQQTWEGMEKTVSLGLVRSIGLSNYELFLTRDCLAYSKIKPAVSQFETHPYFQRDSLVKFCMKHGVLPTAH 209          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: XYL1_PICGU (NADPH-dependent D-xylose reductase OS=Pichia guilliermondii GN=XYL1 PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.497e-38
Identity = 86/212 (40.57%), Postives = 121/212 (57.08%), Query Frame = 2
Query:   47 MAITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHG--HVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGT--TDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            M+ITLN+G++MP +G G W++D++   D I NAIK+GYR  D A DY NE EVGE +  A   GLV R++LF+ +KLWNS H   +V +A   +             +HFP+A K               DG   I   + +  TW A+E +V  G +RSIGISN+   L +D L  +K+KP V Q E HPY Q+  L+++ Q  GI +TA+
Sbjct:    1 MSITLNSGYEMPSVGFGCWKVDKATCADTIYNAIKVGYRLFDGAEDYGNEKEVGEGINRALDEGLVARDELFVVSKLWNSFHDPKNVEKALDRTLSDLKVDYLDLFLIHFPIAFKFVPFEEKYPPGFYCGDGDKFIYEGVPIIDTWRALEKMVEKGKIRSIGISNFPGALIQDLLRGAKIKPAVLQIEHHPYLQQPRLIEYVQSQGIAITAY 212          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: GRE3_YEAST (NADPH-dependent aldose reductase GRE3 OS=Saccharomyces cerevisiae GN=GRE3 PE=1 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.689e-38
Identity = 85/214 (39.72%), Postives = 122/214 (57.01%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGV------GTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            +TLNNG KMP++GLG W++D+    + I  AIK+GYR  D A DY NE EVGE + +A S GLV R+D+F+ +KLWN+ H   HV  A K +             +HFP+A K+         G    A D       +  + +  T+ A+E+ V  GL++SIG+SN+   L +D L   ++KPV  Q E HPY  ++ LV+FC+ H I V A+
Sbjct:    5 VTLNNGLKMPLVGLGCWKIDKKVCANQIYEAIKLGYRLFDGACDYGNEKEVGEGIRKAISEGLVSRKDIFVVSKLWNNFHHPDHVKLALKKTLSDMGLDYLDLYYIHFPIAFKYVPFEEKYPPGFYTGADDEKKGHITEAHVPIIDTYRALEECVDEGLIKSIGVSNFQGSLIQDLLRGCRIKPVALQIEHHPYLTQEHLVEFCKLHDIQVVAY 218          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: ALRA_DICDI (Aldose reductase A OS=Dictyostelium discoideum GN=alrA PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 5.689e-38
Identity = 84/207 (40.58%), Postives = 121/207 (58.45%), Query Frame = 2
Query:   59 LNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFST-GLVKREDLFITTKLWNSDHG--HVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            L++G K+P++G G W+ + + +   +  A+  GYRHIDCAA Y NE EVGEA  + F+T   VKRED+FIT+KLWN+ H   HV  A + +             VH+PVA ++T      S    + V       S+  TW  ME LV  GLV+SIG+SN+++    + L+Y+++KP  NQ E HP+  +  L KFC KH I +TA+
Sbjct:    7 LSSGHKIPLVGFGTWKAETTLVGKAVEVALDAGYRHIDCAAVYLNEKEVGEAFTKKFTTEATVKREDVFITSKLWNTFHKKEHVRPALERTLSDLGLQYLDLYLVHWPVAFEYTSNDIQTSGSTQEFV-------SIRETWEEMEKLVDAGLVKSIGLSNFNVQGLMEVLSYARIKPAANQVELHPFLSQPELKKFCDKHNIHLTAY 206          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: A1A1A_DANRE (Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=akr1a1a PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 9.704e-38
Identity = 86/209 (41.15%), Postives = 118/209 (56.46%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTG-LVKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            ITL+ G +MP +GLG W+     ++  ++ A+  GYRHIDCAA Y NE EVGEAL E    G  ++R+D+F+T+KLWN+ H    V EAC+ S             +H+P+A    G G        DG ++ D T     TW AME LV  GL ++IG+SN++     D L+ +K KPVVNQ E HPY  +  LV  C    + VTA+
Sbjct:    5 ITLSTGQRMPTVGLGTWKSAPGQVKQAVLAALDCGYRHIDCAAAYSNEREVGEALTERLGPGKSLRRDDIFVTSKLWNTKHHPDDVEEACRRSLSDLRLSYLDLYLIHWPMA---FGRGDELIPRHPDGTIQYDDT-HYRDTWAAMEKLVDQGLAKAIGLSNFNAKQIDDILSIAKHKPVVNQVECHPYLVQAELVSHCWSRNLTVTAY 209          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: XYL1_TRIRE (NAD(P)H-dependent D-xylose reductase OS=Trichoderma reesei GN=xyl1 PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.655e-37
Identity = 88/211 (41.71%), Postives = 112/211 (53.08%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNS--DHGHVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGTT-DSALDADGVLEI--DTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + LN+G+ MP +G G+W++D +   D + NAIK GYR  D A DY NE E GE +A A   GLVKREDLFI +KLW +  D   V    +               VHFP A ++             DG  E+    T +L+ TW AME LV  GL RSIG+SNY      D L Y+++KP   Q E HPY Q+  LV   Q  GI VTA+
Sbjct:    6 LKLNSGYDMPQVGFGLWKVDNAVCADTVYNAIKAGYRLFDGACDYGNEKECGEGVARAIKDGLVKREDLFIVSKLWQTFHDEDKVEPITRRQLADWQIDYFDLFLVHFPAALEYVDPSVRYPPGWFYDGKSEVRWSKTTTLQQTWGAMERLVDKGLARSIGVSNYQAQSVYDALIYARIKPATLQIEHHPYLQQPDLVSLAQTEGIVVTAY 216          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: XYL1_ASPNG (NAD(P)H-dependent D-xylose reductase OS=Aspergillus niger GN=xyrA PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.162e-37
Identity = 84/210 (40.00%), Postives = 115/210 (54.76%), Query Frame = 2
Query:   53 ITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDH--GHVLEACKDSXXXXXXXXXXXXXVHFPVATKHT--GVGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            + LN+G+ MP++G G+W+++     D I +AIK GYR  D A DY NE E G+ +A A   GLVKRE+LFI +KLWNS H    V   C+               VHFP++ K+    V            LE     +++ TW AME LV   L RSIGISN+   L  D L Y++++P   Q E HPY  +  LV++ QK G+ VTA+
Sbjct:    6 VKLNSGYDMPLVGFGLWKVNNDTCADQIYHAIKEGYRLFDGACDYGNEVEAGQGIARAIKDGLVKREELFIVSKLWNSFHDGDRVEPICRKQLADWGIDYFDLYIVHFPISLKYVDPAVRYPPGWKSEKDELEFGNA-TIQETWTAMESLVDKKLARSIGISNFSAQLVMDLLRYARIRPATLQIEHHPYLTQTRLVEYAQKEGLTVTAY 214          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: XYL1_PACTA (NAD(P)H-dependent D-xylose reductase OS=Pachysolen tannophilus GN=XYL1 PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.687e-37
Identity = 88/209 (42.11%), Postives = 118/209 (56.46%), Query Frame = 2
Query:   56 TLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHG--HVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGT--TDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            TLNNG K+P IG+G W+++  N  D++  AIK GYR  DCA DY NE EVGE +  A   GLVKR+DLFIT+KLWN+ H   +V +A   S             +HFP++ K               DG   I   + +  TW AME+LV  GLV+SIG+SN    L  D +  +++KP   Q E HPY Q++ LV++ Q  GI VT +
Sbjct:    7 TLNNGRKIPAIGMGCWKLE--NAADMVYAAIKEGYRLFDCACDYGNEKEVGEGINRAIKDGLVKRKDLFITSKLWNNFHAKENVKKALMKSLSDFNLDYFDLYLMHFPISFKFVPFEEKYPPGFYCGDGDKFIYEDVPIIETWRAMENLVDEGLVKSIGVSNVSGGLLEDLIKAARIKPASLQIEHHPYLQQNKLVEYAQLKGIVVTGY 213          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: XYL1_CANSH (NAD(P)H-dependent D-xylose reductase OS=Candida shehatae GN=XYL1 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.073e-36
Identity = 85/213 (39.91%), Postives = 116/213 (54.46%), Query Frame = 2
Query:   44 IMAITLNNGFKMPIIGLGVWRMDESNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHG--HVLEACKDSXXXXXXXXXXXXXVHFPVATKHTGVGT--TDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            I A  LNNG +MP IG G W++D+S   D + NAIK GYR  D A DY NE EVGE +  A   G+V RE++F+T+KLWN+ H   +V  A   +             +HFP+A K   +           DG   +   + +  TW A+E LV  G +RSIG+SN+   L  D    + +KP V Q E HPY Q+  L+++ QK GI VTA+
Sbjct:    6 IPAFKLNNGLEMPSIGFGCWKLDKSTAADQVYNAIKAGYRLFDGAEDYGNEQEVGEGVKRAIDEGIVTREEIFLTSKLWNNYHDPKNVETALNKTLKDLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGDNFVYEDVPILETWKALEKLVKAGKIRSIGVSNFPGALLLDLFRGATIKPAVLQVEHHPYLQQPKLIEYAQKVGITVTAY 218          
BLAST of FC930975 vs. ExPASy Swiss-Prot
Match: ALRC_DICDI (Aldose reductase C OS=Dictyostelium discoideum GN=alrC PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.073e-36
Identity = 84/208 (40.38%), Postives = 122/208 (58.65%), Query Frame = 2
Query:   59 LNNGFKMPIIGLGVWRMDE-SNIRDLIINAIKIGYRHIDCAADYRNEAEVGEALAEAFSTGLVKREDLFITTKLWNSDHGH--VLEACKDSXXXXXXXXXXXXXVHFPVATKHTG-VGTTDSALDADGVLEIDTTISLETTWHAMEDLVSMGLVRSIGISNYDIFLTRDCLAYSKVKPVVNQFETHPYFQRDSLVKFCQKHGICVTAH 670
            LN+G ++P IGLG +  +    + D I NA+K GYRHID AA Y NE  +G +L E F  G +KRED+F T+KLWNS H    V++ C  +             +H+P+A +++  +G T   L       I   +S+  TW  ME LV +GLV+SIG+SN+++    D L Y+K+KPVVNQ E HPY  +  L ++C K+ I + A+
Sbjct:   19 LNDGNQIPSIGLGTYYSENPGEVGDAINNALKNGYRHIDGAAFYGNEKVIGNSLKEIFKEGEIKREDIFYTSKLWNSCHNSNLVVKHCVKTIEDLGIGYLDLYLIHWPIAFENSNPLGLTIEPLRDQNGNPIIAPVSIRETWQEMEKLVELGLVKSIGVSNFNVQNLVDLLTYAKIKPVVNQVEIHPYLTQFKLQEYCDKYEIKLVAY 226          
The following BLAST results are available for this feature:
BLAST of FC930975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
S6PD_MALDO1.581e-8065.53NADP-dependent D-sorbitol-6-phosphate dehydrogenas... [more]
XYL1_PICGU1.497e-3840.57NADPH-dependent D-xylose reductase OS=Pichia guill... [more]
GRE3_YEAST5.689e-3839.72NADPH-dependent aldose reductase GRE3 OS=Saccharom... [more]
ALRA_DICDI5.689e-3840.58Aldose reductase A OS=Dictyostelium discoideum GN=... [more]
A1A1A_DANRE9.704e-3841.15Alcohol dehydrogenase [NADP+] A OS=Danio rerio GN=... [more]
XYL1_TRIRE1.655e-3741.71NAD(P)H-dependent D-xylose reductase OS=Trichoderm... [more]
XYL1_ASPNG2.162e-3740.00NAD(P)H-dependent D-xylose reductase OS=Aspergillu... [more]
XYL1_PACTA3.687e-3742.11NAD(P)H-dependent D-xylose reductase OS=Pachysolen... [more]
XYL1_CANSH1.073e-3639.91NAD(P)H-dependent D-xylose reductase OS=Candida sh... [more]
ALRC_DICDI1.073e-3640.38Aldose reductase C OS=Dictyostelium discoideum GN=... [more]

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Properties
Property NameValue
Genbank descriptionC34100A10EF PostHarvP1 Citrus clementina cDNA clone C34100A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC930975 ID=FC930975; Name=FC930975; organism=Citrus clementina; type=EST; length=671bp
CAGAGCAAAAGCAGAGAAAGAAAGGGTGAGTGAGTAAAGAGAAATAATGG
CAATAACACTCAACAATGGATTCAAGATGCCAATAATTGGACTGGGTGTT
TGGCGCATGGATGAATCAAACATTAGAGACCTCATCATCAATGCCATCAA
GATTGGCTATCGCCATATTGACTGTGCTGCTGATTATAGGAATGAAGCGG
AAGTTGGGGAGGCACTTGCAGAAGCATTTAGCACTGGGCTTGTCAAGAGG
GAGGATCTTTTCATTACCACCAAGCTTTGGAATTCAGATCATGGACATGT
TCTGGAGGCCTGTAAGGACAGTTTAAAGAAGCTCCAACTGGATTATCTAG
ATCTCTACCTCGTCCATTTTCCTGTAGCCACAAAACACACTGGCGTTGGT
ACAACTGATAGTGCATTAGATGCGGATGGTGTGCTGGAGATAGACACAAC
TATATCATTGGAAACAACCTGGCATGCAATGGAGGATTTGGTTTCAATGG
GTTTAGTTCGAAGCATTGGGATCAGCAACTATGACATCTTTTTAACAAGA
GACTGCTTAGCTTACTCCAAAGTGAAGCCGGTGGTGAATCAGTTTGAAAC
TCACCCATACTTCCAACGTGATTCTCTTGTCAAGTTCTGTCAGAAGCATG
GGATATGTGTCACAGCTCATA
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