FC930984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPB_MACFA (T-complex protein 1 subunit beta OS=Macaca fascicularis GN=CCT2 PE=2 SV=3) HSP 1 Score: 377.096 bits (967), Expect = 5.294e-104 Identity = 182/237 (76.79%), Postives = 215/237 (90.72%), Query Frame = 1 Query: 16 QLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 +LAV+AV+RLKGS NLE+I IIKK GGSL DS+LDEGF+LDKKIG+ QPKRIENAKIL+ANT MDTDK+KI+G+RVRVDS +K AEIE AEK+KM+EKV++I+ HGINCF+NRQLIYN+PE+LF AG++AIEHADF G+ERLALVTGGEIASTFD+PE VKLG CKLIEE+MIGEDKLIHFSGV +G+ACTIVLRGA+ +LDEAERSLHDALCVL+QTV DSR ++GGG EM+M Sbjct: 181 KLAVEAVLRLKGSGNLEAIHIIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFAGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLM 417
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPB_HUMAN (T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4) HSP 1 Score: 377.096 bits (967), Expect = 5.294e-104 Identity = 182/237 (76.79%), Postives = 215/237 (90.72%), Query Frame = 1 Query: 16 QLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 +LAV+AV+RLKGS NLE+I IIKK GGSL DS+LDEGF+LDKKIG+ QPKRIENAKIL+ANT MDTDK+KI+G+RVRVDS +K AEIE AEK+KM+EKV++I+ HGINCF+NRQLIYN+PE+LF AG++AIEHADF G+ERLALVTGGEIASTFD+PE VKLG CKLIEE+MIGEDKLIHFSGV +G+ACTIVLRGA+ +LDEAERSLHDALCVL+QTV DSR ++GGG EM+M Sbjct: 181 KLAVEAVLRLKGSGNLEAIHIIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFAGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLM 417
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPB_BOVIN (T-complex protein 1 subunit beta OS=Bos taurus GN=CCT2 PE=2 SV=3) HSP 1 Score: 376.326 bits (965), Expect = 9.030e-104 Identity = 181/237 (76.37%), Postives = 215/237 (90.72%), Query Frame = 1 Query: 16 QLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 +LAV+AV+RLKGS NLE+I +IKK GGSL DS+LDEGF+LDKKIG+ QPKRIENAKIL+ANT MDTDK+KI+G+RVRVDS +K AEIE AEK+KM+EKV++I+ HGINCF+NRQLIYN+PE+LF AG++AIEHADF G+ERLALVTGGEIASTFD+PE VKLG CKLIEE+MIGEDKLIHFSGV +G+ACTIVLRGA+ +LDEAERSLHDALCVL+QTV DSR ++GGG EM+M Sbjct: 181 KLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLM 417
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPB_RAT (T-complex protein 1 subunit beta OS=Rattus norvegicus GN=Cct2 PE=1 SV=3) HSP 1 Score: 374.785 bits (961), Expect = 2.627e-103 Identity = 180/237 (75.95%), Postives = 214/237 (90.30%), Query Frame = 1 Query: 16 QLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 +LAV+AV+RLKGS NLE+I +IKK GGSL DS+LDEGF+LDKKIG+ QPKRIENAKIL+ANT MDTDK+KI+G+RVRVDS +K AEIE AEK+KM+EKV++I+ HGINCF+NRQLIYN+PE+LF AG++AIEHADF G+ERLALVTGGEIASTFD+PE VKLG CKLIEE+MIGEDKLIHFSGV +G+ACTIVLRGA+ +LDEAERSLHDALCVL+QTV D R ++GGG EM+M Sbjct: 181 KLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFAGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDPRTVYGGGCSEMLM 417
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPB_MOUSE (T-complex protein 1 subunit beta OS=Mus musculus GN=Cct2 PE=1 SV=4) HSP 1 Score: 374.785 bits (961), Expect = 2.627e-103 Identity = 180/237 (75.95%), Postives = 214/237 (90.30%), Query Frame = 1 Query: 16 QLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 +LAV+AV+RLKGS NLE+I +IKK GGSL DS+LDEGF+LDKKIG+ QPKRIENAKIL+ANT MDTDK+KI+G+RVRVDS +K AEIE AEK+KM+EKV++I+ HGINCF+NRQLIYN+PE+LF AG++AIEHADF G+ERLALVTGGEIASTFD+PE VKLG CKLIEE+MIGEDKLIHFSGV +G+ACTIVLRGA+ +LDEAERSLHDALCVL+QTV D R ++GGG EM+M Sbjct: 181 KLAVEAVLRLKGSGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFAGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDPRTVYGGGCSEMLM 417
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPB_SCHPO (Probable T-complex protein 1 subunit beta OS=Schizosaccharomyces pombe GN=cct2 PE=2 SV=1) HSP 1 Score: 358.221 bits (918), Expect = 2.545e-98 Identity = 177/237 (74.68%), Postives = 210/237 (88.61%), Query Frame = 1 Query: 16 QLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 QLAVDAV+RLKGSTNL++IQIIK GG L DSFLDEGFIL+K IG+ PK +ENA IL+ANTAMDTDKVK++GARVRVD+ K AE+E AE++KM+ KV+KI +H INCF+NRQLIYN+PE+LFADAGI++IEHADFDGIERL+LVTGGEIASTFD+PE VKLGHCK IEEI+IGEDK+I FSGVE G+ACTIVLRGA+H +LDE+ER++HDAL VLSQTV +SRV GGG EM+M Sbjct: 177 QLAVDAVLRLKGSTNLDNIQIIKILGGKLDDSFLDEGFILNKTIGVNCPKVMENANILIANTAMDTDKVKVFGARVRVDTTGKLAELERAEREKMKAKVEKIKSHNINCFINRQLIYNWPEQLFADAGIMSIEHADFDGIERLSLVTGGEIASTFDHPELVKLGHCKKIEEIIIGEDKMIKFSGVEAGEACTIVLRGATHQLLDESERAIHDALAVLSQTVAESRVTLGGGCAEMLM 413
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPB_DICDI (T-complex protein 1 subunit beta OS=Dictyostelium discoideum GN=cct2 PE=1 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 2.465e-93 Identity = 161/236 (68.22%), Postives = 204/236 (86.44%), Query Frame = 1 Query: 19 LAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 + VDAV+RL G+TNL++I IIKK GGSL++S+LDEGFIL+KKIG+G PKR+EN KIL+ANTAMDTDK+KI+G +V VDSM++ A++E AEK+KM K +KI+ HGINCFVNRQL+YN PE+ FA+ G+++IEHADFDGIERLALVTG EI STFD+PE VK+G CKLIEE+MIGEDK+I FSG+ G+ACTIVLRGA+ H+L+EAERS+HDALCVL+ TV ++R + G G EM+M Sbjct: 181 MVVDAVLRLNGNTNLDNIHIIKKSGGSLRESYLDEGFILEKKIGVGCPKRLENPKILIANTAMDTDKIKIFGGKVVVDSMTELAKMEDAEKEKMLNKCKKIVDHGINCFVNRQLVYNLPEQYFAEHGVMSIEHADFDGIERLALVTGAEIVSTFDHPELVKIGTCKLIEEVMIGEDKVIRFSGIPSGEACTIVLRGATSHILEEAERSIHDALCVLAVTVAETRTVLGAGCSEMIM 416
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 328.561 bits (841), Expect = 2.159e-89 Identity = 157/237 (66.24%), Postives = 202/237 (85.23%), Query Frame = 1 Query: 16 QLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 QLAVDAV+RLKGS NL++IQIIKK GGS+ +S+LDEGF+L+K G+ QP+R+E AKIL+ANT MDTDKVK++G+RVRVD ++K AE+E AEK KM+EKV KI+AH N F+NRQLIYN+PE+LFADA ++AIEHADF+GIERLALV GGEI STFD+P++ + G C LIEEIMIGED+L+ FSGV++G+AC++VLRGA+ +LDE+ERSLHDALCVL V +S+ + G G E++M Sbjct: 175 QLAVDAVLRLKGSGNLDAIQIIKKLGGSMNESYLDEGFLLEKLPGMFQPRRVEKAKILIANTPMDTDKVKVFGSRVRVDGVAKVAELEAAEKLKMKEKVDKILAHNCNVFINRQLIYNYPEQLFADAKVMAIEHADFEGIERLALVLGGEIVSTFDSPQTAQFGSCDLIEEIMIGEDRLLRFSGVKLGEACSVVLRGATQQILDESERSLHDALCVLVTHVKESKTVAGAGASEILM 411
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPB_YEAST (T-complex protein 1 subunit beta OS=Saccharomyces cerevisiae GN=CCT2 PE=1 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 3.811e-86 Identity = 156/237 (65.82%), Postives = 189/237 (79.75%), Query Frame = 1 Query: 16 QLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 +LA +A++RLKGSTNLE IQIIK GG L DSFLDEGFIL KK G QPKRIENAKIL+ANT +DTDKVKI+G + +VDS +K A++E AE++KM+ K+ KI GIN F+NRQLIY++PE+LF D GI +IEHADF+G+ERLALVTGGE+ STFD P KLG C +IEEIM+GE + FSG + G+ACTIVLRGA+ LDEAERSLHDAL VLSQT ++R + GGG EMVM Sbjct: 175 ELATNAILRLKGSTNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQPKRIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGVERLALVTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVM 411
BLAST of FC930984 vs. ExPASy Swiss-Prot
Match: TCPB_ENCCU (T-complex protein 1 subunit beta OS=Encephalitozoon cuniculi GN=CCT2 PE=1 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 6.127e-60 Identity = 120/237 (50.63%), Postives = 170/237 (71.73%), Query Frame = 1 Query: 16 QLAVDAVMRLKGSTNLESIQIIKKPGGSLKDSFLDEGFILDKKIGIGQPKRIENAKILVANTAMDTDKVKIYGARVRVDSMSKAAEIEGAEKQKMREKVQKIIAHGINCFVNRQLIYNFPEELFADAGILAIEHADFDGIERLALVTGGEIASTFDNPESVKLGHCKLIEEIMIGEDKLIHFSGVEMGQACTIVLRGASHHVLDEAERSLHDALCVLSQTVNDSRVLFGGGWPEMVM 726 ++ V+AV +L+G +L IQIIK G L+DS+LD+GF+L K I I + N ++L+ANT+MD DK+K++GA++ V+S+ + E+E AEK K++ KV++I +G+N FVNRQL+Y++P +L GI AIEHADFDG+ERL V GG+I STFDN + G C+ I + +G +++I FSGV G A TIVL G+S +LDEAERS+HDALCVL++ D RV++GGG EM M Sbjct: 163 EICVNAVEKLEGRNDLNLIQIIKC-SGKLEDSYLDDGFLLKKDIRIDD---VVNPRVLIANTSMDQDKIKVFGAKINVNSVGELEEMEKAEKIKIKGKVERISQNGVNVFVNRQLVYDYPLQLLRMKGIQAIEHADFDGVERLNNVLGGKILSTFDNMDESCYGTCESIRNVHVGNERMIKFSGVRSG-ASTIVLCGSSKEMLDEAERSVHDALCVLAKIKEDPRVIYGGGSSEMAM 394 The following BLAST results are available for this feature:
BLAST of FC930984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930984 ID=FC930984; Name=FC930984; organism=Citrus clementina; type=EST; length=727bpback to top |