FC931010
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931010 vs. ExPASy Swiss-Prot
Match: SYP22_ARATH (Syntaxin-22 OS=Arabidopsis thaliana GN=SYP22 PE=1 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 2.093e-64 Identity = 133/184 (72.28%), Postives = 148/184 (80.43%), Query Frame = 3 Query: 123 MSFQDLEAGRPVSSLRRNLVNGKQDSTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLLDNEIAFNEAII 674 MSFQDLE+GR S+ + N G+QDSTQAVASGIFQINT VSTFQRLVNTLGTPKDTPELREK+HKTRLHIGQLVKDTSAKLK+ASETDH + V+ FQAVLKEFQKAQ+ AAERET YTPFVPQ+ LPSSYTA E+ D+ EQ A L ES+RQE+VLLDNEIAFNEA+I Sbjct: 1 MSFQDLESGRGRSTRKFN--GGRQDSTQAVASGIFQINTGVSTFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKEASETDHQSGVNPSKKIADAKLARDFQAVLKEFQKAQQTAAERETTYTPFVPQSALPSSYTAGEV----DKVPEQRAQLQESKRQELVLLDNEIAFNEAVI 178
BLAST of FC931010 vs. ExPASy Swiss-Prot
Match: SYP23_ARATH (Syntaxin-23 OS=Arabidopsis thaliana GN=SYP23 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 6.091e-64 Identity = 130/187 (69.52%), Postives = 147/187 (78.61%), Query Frame = 3 Query: 123 MSFQDLEAGRPVSSLRRNLVNG---KQDSTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLLDNEIAFNEAII 674 MSFQDLEAGR S +NG +QD+TQ VASGIFQINT+VSTF RLVNTLGTPKDTPELREK+HKTRL+IGQLVKDTSAKLK+ASETDH V+ FQAVLKEFQKAQRLAAERET Y P V + LPSSYT+ E+D++ D+ EQ ALLVES+RQE+VLLDNEIAFNEA+I Sbjct: 1 MSFQDLEAGRGRSLASSRNINGGGSRQDTTQDVASGIFQINTSVSTFHRLVNTLGTPKDTPELREKLHKTRLYIGQLVKDTSAKLKEASETDHQRGVNQKKKIVDAKLAKDFQAVLKEFQKAQRLAAERETVYAPLVHKPSLPSSYTSSEIDVNGDKHPEQRALLVESKRQELVLLDNEIAFNEAVI 187
BLAST of FC931010 vs. ExPASy Swiss-Prot
Match: SYP21_ARATH (Syntaxin-21 OS=Arabidopsis thaliana GN=SYP21 PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.610e-48 Identity = 111/191 (58.12%), Postives = 134/191 (70.16%), Query Frame = 3 Query: 123 MSFQDLEAGRPVSSLRRNLVNGKQ-------DSTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLLDNEIAFNEAII 674 MSFQDLEAG + R G+Q D +Q VA+GIF+I+TAV++F RLVN++GTPKDT ELR+K+ KTRL I +LVK+TSAKLK+ASE D H S FQ+VLKEFQKAQRLAAERE YTP V + + P+SY A ELD S R ++Q ALL++SRRQEVV LDNEI FNEAII Sbjct: 1 MSFQDLEAGTRSPAPNR-FTGGRQQRPSSRGDPSQEVAAGIFRISTAVNSFFRLVNSIGTPKDTLELRDKLQKTRLQISELVKNTSAKLKEASEADLHGSASQIKKIADAKLAKDFQSVLKEFQKAQRLAAEREITYTPVVTKEI-PTSYNAPELDTESLRISQQQALLLQSRRQEVVFLDNEITFNEAII 189
BLAST of FC931010 vs. ExPASy Swiss-Prot
Match: SYP24_ARATH (Putative syntaxin-24 OS=Arabidopsis thaliana GN=SYP24 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.860e-26 Identity = 66/120 (55.00%), Postives = 81/120 (67.50%), Query Frame = 3 Query: 315 HKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLLDNEIAFNEAII 674 HK L IGQLVKDTSA L++ASETDH V+ F+A LKEFQKAQ + ERET+Y PF P+ S+++ E+DI DRS EQ +L+ESRRQE+VLLDNEI+ NEA I Sbjct: 154 HKKMLLIGQLVKDTSANLREASETDHRRDVAQSKKIADAKLAKDFEAALKEFQKAQHITVERETSYIPFDPK----GSFSSSEVDIGYDRSQEQR-VLMESRRQEIVLLDNEISLNEARI 268 The following BLAST results are available for this feature:
BLAST of FC931010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931010 ID=FC931010; Name=FC931010; organism=Citrus clementina; type=EST; length=675bpback to top |