FC931022

Overview
NameFC931022
Unique NameFC931022
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length635
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11560 contig Ccv1_Contig11560:135..769. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931022 vs. ExPASy Swiss-Prot
Match: HYES_HUMAN (Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.038e-30
Identity = 60/150 (40.00%), Postives = 87/150 (58.00%), Query Frame = 2
Query:  131 INMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEED 580
            + +H   +G+GPAV   HGFPE WYSWR Q+  L+  GYR +A D++GYG++ APP I  Y              + G+ Q   +GHDWG ++ WY  L  P+RV+A+ +L+  F   NP   P++  +A    D+ +  FQEPGVAE +
Sbjct:  248 VRLHFVELGSGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLESIKANPVFDYQL-YFQEPGVAEAE 396          
BLAST of FC931022 vs. ExPASy Swiss-Prot
Match: HYES_PIG (Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.153e-30
Identity = 62/165 (37.58%), Postives = 94/165 (56.97%), Query Frame = 2
Query:  128 GINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAXD*YCRLIKNFW 622
            G+ +H   +G+GPAV   HGFPE W+SWR Q+  L+  G+R +A D++GYG++ APP I  Y+             + G+ Q   +GHDWG ++ W   L  P+RV+A+ +L+  F   NP   P++  +A    D+ +  FQEPGVAE +   +   R  KNF+
Sbjct:  247 GVRLHFVEMGSGPAVCLCHGFPESWFSWRYQIPALAQAGFRVLAVDMKGYGESSAPPEIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGGVLVWNMALFYPERVRAVASLNTPFMPSNPNVSPMEIIKANPVFDYQL-YFQEPGVAEAELEQN-LDRTFKNFF 409          
BLAST of FC931022 vs. ExPASy Swiss-Prot
Match: HYES_RAT (Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.698e-29
Identity = 61/170 (35.88%), Postives = 92/170 (54.12%), Query Frame = 2
Query:  128 GINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRAL--FGDDFYICRFQEPGVAEEDFAXD*YCRLIKNFWEVA 631
            GI +H   +G+GPA+   HGFPE W+SWR Q+  L+  G+R +A D++GYGD+ +PP I  Y              + GI Q   +GHDW  ++ W   L  P+RV+A+ +L+      NP   P++  R++  F    Y   FQEPGVAE +   +   R  K+F+  +
Sbjct:  245 GIRLHFVEMGSGPAICLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCEEMVTFLNKLGIPQAVFIGHDWAGVLVWNMALFHPERVRAVASLNTPLMPPNPEVSPMEVIRSIPVFNYQLY---FQEPGVAEAELEKN-MSRTFKSFFRTS 410          
BLAST of FC931022 vs. ExPASy Swiss-Prot
Match: HYES_MOUSE (Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 4.823e-28
Identity = 61/170 (35.88%), Postives = 92/170 (54.12%), Query Frame = 2
Query:  128 GINMHVASIGTGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRAL--FGDDFYICRFQEPGVAEEDFAXD*YCRLIKNFWEVA 631
            GI +H   +G+GPA+   HGFPE W+SWR Q+  L+  G+R +A D++GYGD+ +PP I  Y              + GI Q   +GHDW  ++ W   L  P+RV+A+ +L+  F   +P   P+   R++  F    Y   FQEPGVAE +   +   R  K+F+  +
Sbjct:  245 GIRLHFVEMGSGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPDPDVSPMKVIRSIPVFNYQLY---FQEPGVAEAELEKN-MSRTFKSFFRAS 410          
BLAST of FC931022 vs. ExPASy Swiss-Prot
Match: YFHM_BACSU (AB hydrolase superfamily protein yfhM OS=Bacillus subtilis GN=yfhM PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.822e-25
Identity = 62/176 (35.23%), Postives = 88/176 (50.00%), Query Frame = 2
Query:   92 MEKIKHTTVATNGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFAXD*YCRLIK 613
            M+ +K   V TNGI +HVA+ G   GP ++ LHGFPE WY W+ Q+  L   GYR IAPD RGY  +D P  I SY              +F  E+  ++GHDWG  +AW+    RP+ ++ L+ +++          P+  Y   +    YI  FQ P + E     + Y  L K
Sbjct:    1 MDGVKCQFVNTNGITLHVAAAGREDGPLIVLLHGFPEFWYGWKNQIKPLVDAGYRVIAPDQRGYNLSDKPEGIDSYRIDTLRDDIIGLITQFTDEKAIVIGHDWGGAVAWHLASTRPEYLEKLIAINIPHPHVMKTVTPL--YPPQWLKSSYIAYFQLPDIPEASLRENDYDTLDK 174          
BLAST of FC931022 vs. ExPASy Swiss-Prot
Match: EPHX3_HUMAN (Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.272e-20
Identity = 50/117 (42.74%), Postives = 67/117 (57.26%), Query Frame = 2
Query:  122 TNGINMHVASIG--TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLS 466
            ++G+ +H  S G   GP +LFLHGFPE W+SWR QL    SR +  +A DLRGYG +DAP  +  YT               G  +  LV HDWGAL+AW+F +  P  V+ +V +S
Sbjct:   82 SSGLRLHYVSAGRGNGPLMLFLHGFPENWFSWRYQLREFQSR-FHVVAVDLRGYGPSDAPRDVDCYTIDLLLVDIKDVILGLGYSKCILVAHDWGALLAWHFSIYYPSLVERMVVVS 197          
BLAST of FC931022 vs. ExPASy Swiss-Prot
Match: EPHX4_MOUSE (Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.134e-19
Identity = 56/164 (34.15%), Postives = 77/164 (46.95%), Query Frame = 2
Query:  107 HTTVATNGINMHVASIGTG--PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRS---RNPATKPVDQYRALFGDDFYICRFQEPGVAEEDF 583
            +  +  +G+  H  + G    P +L LHGFPE WYSWR QL    S  YR +A DLRGYG++DAP    SY                G  +  L+GHDWG +IAW   +  P+ +  L+ ++    S         P   +R+ F   F I RF E   +  DF
Sbjct:   71 YVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRHQLREFKSE-YRVVALDLRGYGESDAPAHQESYKLDCLIADIKDILDSLGYSKCVLIGHDWGGMIAWLIAVCYPEMIMKLIVINFPHPSVFTEYILRHPAQLFRSSFYYFFQIPRFPEFMFSINDF 233          
BLAST of FC931022 vs. ExPASy Swiss-Prot
Match: EPHX4_HUMAN (Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.345e-19
Identity = 56/162 (34.57%), Postives = 78/162 (48.15%), Query Frame = 2
Query:  107 HTTVATNGINMHVASIGTG--PAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALVNLSVVFRSRNPATKPVDQYRALFGDDFYICRFQEPGVAEEDFA 586
            +  +  +G+  H  + G    P +L LHGFPE WYSWR QL    S  YR +A DLRGYG+TDAP    +Y                G  +  L+GHDWG +IAW   +  P+ V  L+ ++  F   N  T+ + ++ A      Y   FQ P   E  F+
Sbjct:   73 YVRIKDSGLRFHYVAAGERGKPLMLLLHGFPEFWYSWRYQLREFKSE-YRVVALDLRGYGETDAPIHRQNYKLDCLITDIKDILDSLGYSKCVLIGHDWGGMIAWLIAICYPEMVMKLIVIN--FPHPNVFTEYILRHPAQLLKSSYYYFFQIPWFPEFMFS 231          
BLAST of FC931022 vs. ExPASy Swiss-Prot
Match: EPHX3_MOUSE (Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 3.465e-18
Identity = 46/116 (39.66%), Postives = 62/116 (53.45%), Query Frame = 2
Query:  116 VATNGINMHVASIG--TGPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 457
            V ++G+ +H  S G   GP +LFLHGFPE W+SWR QL    S  +  +A D+RGY  +DAP  +  YT               G  +  LV HDWGA +AW F +  P  V+ +V
Sbjct:   87 VKSSGLRLHYVSAGHGNGPLMLFLHGFPENWFSWRYQLREFQSH-FHVVAVDMRGYSPSDAPKEVDCYTIDLLLDDIKDTILGLGYSKCILVSHDWGASLAWEFSIYYPSLVERMV 201          
BLAST of FC931022 vs. ExPASy Swiss-Prot
Match: EPHX3_XENTR (Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.246e-17
Identity = 47/113 (41.59%), Postives = 59/113 (52.21%), Query Frame = 2
Query:  125 NGINMHVASIGT--GPAVLFLHGFPELWYSWRKQLLYLSSRGYRAIAPDLRGYGDTDAPPSITSYTALHXXXXXXXXXXEFGIEQVFLVGHDWGALIAWYFCLLRPDRVKALV 457
            +GI  H  + G    P +L LHGFPE WYSWR QL   S+ GYR +A DLRG+G +DAP  +  Y                G  +  LVGHDWG  +AW F +   D V  L+
Sbjct:   83 SGIRFHYVASGDKRNPLMLLLHGFPENWYSWRYQLDEFSN-GYRTVAIDLRGFGGSDAPSRLEDYKMEILLQDLQDLIRGLGYSRCVLVGHDWGGTLAWTFAVRHRDMVTHLI 194          
The following BLAST results are available for this feature:
BLAST of FC931022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
HYES_HUMAN1.038e-3040.00Epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 ... [more]
HYES_PIG5.153e-3037.58Epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV... [more]
HYES_RAT5.698e-2935.88Epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 ... [more]
HYES_MOUSE4.823e-2835.88Epoxide hydrolase 2 OS=Mus musculus GN=Ephx2 PE=1 ... [more]
YFHM_BACSU3.822e-2535.23AB hydrolase superfamily protein yfhM OS=Bacillus ... [more]
EPHX3_HUMAN1.272e-2042.74Epoxide hydrolase 3 OS=Homo sapiens GN=EPHX3 PE=2 ... [more]
EPHX4_MOUSE3.134e-1934.15Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 ... [more]
EPHX4_HUMAN5.345e-1934.57Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 ... [more]
EPHX3_MOUSE3.465e-1839.66Epoxide hydrolase 3 OS=Mus musculus GN=Ephx3 PE=2 ... [more]
EPHX3_XENTR2.246e-1741.59Epoxide hydrolase 3 OS=Xenopus tropicalis GN=ephx3... [more]

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Properties
Property NameValue
Genbank descriptionC34100E11EF PostHarvP1 Citrus clementina cDNA clone C34100E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931022 ID=FC931022; Name=FC931022; organism=Citrus clementina; type=EST; length=635bp
AAAACGTAGATAGTAAATAAAAGCTCAAAAACACCCACCCAACCCCAATA
AGACCAAGAATCAAACAAACAACAGTAAGAGTTTCAGAAAAATGGAGAAA
ATAAAGCACACAACAGTGGCCACGAACGGCATAAACATGCACGTGGCATC
GATAGGGACCGGCCCAGCCGTCCTTTTCCTTCACGGCTTCCCTGAACTCT
GGTACTCCTGGCGCAAGCAGCTCCTCTACCTCTCTTCCCGCGGCTACCGC
GCTATTGCCCCTGACCTTCGTGGCTACGGCGACACCGACGCCCCGCCCTC
CATCACGTCCTACACGGCACTCCACGTCGTCGGTGACCTTGTCGGTCTCC
TCGATGAATTCGGTATCGAACAGGTCTTTTTGGTGGGCCATGACTGGGGT
GCTTTGATTGCTTGGTATTTTTGTTTGCTTCGTCCTGACCGAGTCAAAGC
TTTGGTCAACTTAAGCGTTGTGTTTCGTTCCAGAAACCCTGCGACGAAAC
CTGTCGATCAATACAGGGCTTTGTTTGGTGATGACTTCTATATTTGCAGG
TTTCAGGAACCTGGAGTGGCTGAAGAAGATTTTGCTCNAGATTGATACTG
CAGACTGATAAAGAATTTTTGGGAGGTCGCAGTCC
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