FC931031
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931031 vs. ExPASy Swiss-Prot
Match: RER1A_ARATH (Protein RER1A OS=Arabidopsis thaliana GN=RER1A PE=2 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.370e-69 Identity = 124/174 (71.26%), Postives = 138/174 (79.31%), Query Frame = 3 Query: 183 MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEIE-VADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFN 701 M+ GGD+ S A+PV Q H+AWR+YQ+YLDKTTPHA YRWIGTLV+ IYCLRV+Y+Q PLVDPE V+DGP LPT+GSDEFKPFIRRLPEFKFWYSMTKAFCIAF+MTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKY+YIPF+ Sbjct: 1 MDESGGDSGSVATPVQQRAHEAWRIYQHYLDKTTPHANYRWIGTLVVALIYCLRVYYIQGFYIIAYGLGIYLLNLLIGFLSPLVDPEAGGVSDGPSLPTRGSDEFKPFIRRLPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYKYIPFS 174
BLAST of FC931031 vs. ExPASy Swiss-Prot
Match: RER1B_ARATH (Protein RER1B OS=Arabidopsis thaliana GN=RER1B PE=2 SV=2) HSP 1 Score: 259.225 bits (661), Expect = 1.515e-68 Identity = 120/173 (69.36%), Postives = 136/173 (78.61%), Query Frame = 3 Query: 183 MEGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFN 701 MEG GGD+ S A+PV + H+AWR+YQYYLDKTTPH+ RWIGTLV IYCLRV+ + PLVDPE+EV+DG LPT+GSDEFKPFIRRLPEFKFWYSMTKAFCIAF+MTFFSVFDVPVFWPILLCYW+VLFVLTMRRQIAHMIK++YIPF+ Sbjct: 1 MEGSGGDSGSMATPVQKKVHEAWRVYQYYLDKTTPHSTNRWIGTLVFFLIYCLRVYSIHGFYIISYGLGIYLLNLLIGFLSPLVDPELEVSDGATLPTRGSDEFKPFIRRLPEFKFWYSMTKAFCIAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKHKYIPFS 173
BLAST of FC931031 vs. ExPASy Swiss-Prot
Match: RER1C_ARATH (Protein RER1C OS=Arabidopsis thaliana GN=RER1C PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 8.941e-45 Identity = 84/167 (50.30%), Postives = 110/167 (65.87%), Query Frame = 3 Query: 201 DTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEIEVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPFN 701 D++S A V++ H + Q+ LDKT PH +YRWI L ++ IY +RV++V+ P DPE + G LPT+ SDE++PF+RRLPEFKFW S+ +AF I F+MTFF VFDVPVFWPILL YW++LF LTMR+QI HMIKYRY+PF+ Sbjct: 29 DSSSPADAVNRLIHAFSQRQQHLLDKTVPHVLYRWIACLCVVLIYIVRVYFVEGFYIITYAIGIYLLNLIIAFLSPQEDPEASLTSGGSLPTRRSDEYRPFVRRLPEFKFWLSIIRAFIIGFMMTFFEVFDVPVFWPILLFYWVMLFFLTMRKQIQHMIKYRYVPFS 195
BLAST of FC931031 vs. ExPASy Swiss-Prot
Match: RER1_BOVIN (Protein RER1 OS=Bos taurus GN=RER1 PE=2 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 1.929e-39 Identity = 80/173 (46.24%), Postives = 107/173 (61.85%), Query Frame = 3 Query: 186 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 698 + +G S V ++ ++YQ +LDK+TPH RW+ TL + IY +RV+ +Q P VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++ TK +A V TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF Sbjct: 5 DSVGDSVHGKPSVVYRFFTRLGQIYQSWLDKSTPHTAVRWVVTLGLSFIYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177
BLAST of FC931031 vs. ExPASy Swiss-Prot
Match: RER1_RAT (Protein RER1 OS=Rattus norvegicus GN=Rer1 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.250e-38 Identity = 77/173 (44.51%), Postives = 107/173 (61.85%), Query Frame = 3 Query: 186 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 698 + +G S V ++ ++YQ +LDK+TP+ RW+ TL + +Y +RV+ +Q P VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++ TK +A + TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF Sbjct: 5 DSVGDSVHGKPSVVYRFFSRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMICTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177
BLAST of FC931031 vs. ExPASy Swiss-Prot
Match: RER1_MOUSE (Protein RER1 OS=Mus musculus GN=Rer1 PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.250e-38 Identity = 77/173 (44.51%), Postives = 107/173 (61.85%), Query Frame = 3 Query: 186 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 698 + +G S V ++ ++YQ +LDK+TP+ RW+ TL + +Y +RV+ +Q P VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++ TK +A + TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF Sbjct: 5 DSVGDSVHGKPSVVYRFFSRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMICTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177
BLAST of FC931031 vs. ExPASy Swiss-Prot
Match: RER1_PONAB (Protein RER1 OS=Pongo abelii GN=RER1 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.633e-38 Identity = 78/173 (45.09%), Postives = 107/173 (61.85%), Query Frame = 3 Query: 186 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 698 + +G S V ++ ++YQ +LDK+TP+ RW+ TL + +Y +RV+ +Q P VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++ TK +A V TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF Sbjct: 5 DSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177
BLAST of FC931031 vs. ExPASy Swiss-Prot
Match: RER1_HUMAN (Protein RER1 OS=Homo sapiens GN=RER1 PE=1 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.633e-38 Identity = 78/173 (45.09%), Postives = 107/173 (61.85%), Query Frame = 3 Query: 186 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 698 + +G S V ++ ++YQ +LDK+TP+ RW+ TL + +Y +RV+ +Q P VDP + + DGP LPTK ++EF+PFIRRLPEFKFW++ TK +A V TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF Sbjct: 5 DSVGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWVVTLGLSFVYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTKQNEEFRPFIRRLPEFKFWHAATKGILVAMVCTFFDAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177
BLAST of FC931031 vs. ExPASy Swiss-Prot
Match: RER1_CHICK (Protein RER1 OS=Gallus gallus GN=RER1 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.133e-38 Identity = 80/173 (46.24%), Postives = 106/173 (61.27%), Query Frame = 3 Query: 186 EGIGGDTASAASPVSQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEI--EVADGPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 698 + IG S V ++ ++YQ +LDK+TP+ RWI TL + IY +RV+ +Q P VDP + + DGP LPT+ ++EF+PFIRRLPEFKFW+S TK +A TFF F+VPVFWPIL+ Y+I+LF +TM+RQI HMIKYRYIPF Sbjct: 5 DSIGESVHGKPSVVYRFFTRLGQIYQSWLDKSTPYTAVRWIVTLGLSFIYMIRVYLLQGWYIVTYALGIYHLNLFIAFLSPKVDPSLMEDSDDGPSLPTRQNEEFRPFIRRLPEFKFWHSATKGILVAMACTFFEAFNVPVFWPILVMYFIMLFCITMKRQIKHMIKYRYIPF 177
BLAST of FC931031 vs. ExPASy Swiss-Prot
Match: RER1_CAEEL (Protein RER1 homolog OS=Caenorhabditis elegans GN=rer-1 PE=2 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.133e-38 Identity = 76/160 (47.50%), Postives = 98/160 (61.25%), Query Frame = 3 Query: 228 SQWGHDAWRLYQYYLDKTTPHAVYRWIGTLVILAIYCLRVFYVQXXXXXXXXXXXXXXXXXXXXXXPLVDPEIEVAD---GPLLPTKGSDEFKPFIRRLPEFKFWYSMTKAFCIAFVMTFFSVFDVPVFWPILLCYWIVLFVLTMRRQIAHMIKYRYIPF 698 S++ H YQYYLD+ TPH +RW+ L+ L + R+ +Q P +DP +E D GP+LP+K +DEF+PF+RRLPEFKFW+S KA IA TFF FDVPVFWPIL+ Y+ +L LT++RQI HMIKYRYIPF Sbjct: 13 SRFFHSLEVKYQYYLDRLTPHTAFRWVIALISLVFFASRIILLQGFYIVAYAVGIYYLNLFLLFLTPSIDPALEFEDEDDGPVLPSKTNDEFRPFMRRLPEFKFWHSFMKATLIAITCTFFEFFDVPVFWPILVMYFFILTFLTLKRQIMHMIKYRYIPF 172 The following BLAST results are available for this feature:
BLAST of FC931031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931031 ID=FC931031; Name=FC931031; organism=Citrus clementina; type=EST; length=701bpback to top |