FC931033

Overview
NameFC931033
Unique NameFC931033
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931033 vs. ExPASy Swiss-Prot
Match: MCE1_HUMAN (mRNA-capping enzyme OS=Homo sapiens GN=RNGTT PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.992e-22
Identity = 79/216 (36.57%), Postives = 113/216 (52.31%), Query Frame = 1
Query:  106 TLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLK-EFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVT--------DDDRQLLYV--FERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPN 720
            TLLDGEMIID++  + +   RYLIYD++  N   V +  F  R + +E+E+I PR+ +       +        EPF VR K F+ + T  KLL+  F  ++SH+ DGL+FQ     Y P   + +LKWK   +NSVDF  ++T          +  LLYV  +ER   ++          +E   Y  KIIEC ++ +   W  MR RTDKS PN
Sbjct:  340 TLLDGEMIIDRV--NGQAVPRYLIYDIIKFNSQPVGDCDFNVRLQCIEREIISPRHEKMKTGLIDKTQ------EPFSVRNKPFFDICTSRKLLEGNFAKEVSHEMDGLIFQP-TGKYKPGRCDDILKWKPPSLNSVDFRLKITRMGGEGLLPQNVGLLYVGGYERPFAQIK-------VTKELKQYDNKIIECKFENN--SWVFMRQRTDKSFPN 537          
BLAST of FC931033 vs. ExPASy Swiss-Prot
Match: MCE1_CAEEL (mRNA-capping enzyme OS=Caenorhabditis elegans GN=cel-1 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.477e-21
Identity = 74/218 (33.94%), Postives = 112/218 (51.38%), Query Frame = 1
Query:  106 TLLDGEMIIDKLP--DSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLL-KEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTDDDRQ------LLYVFERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDPDVQ----LWKCMRIRTDKSTPN 720
            TL+D E+IIDK+    +   + R LIYD+M  N  +V++ PFY+R+++++ E+I+ R          +    +++ +   VRRKDF+ L    KL   +F+  + H+ DGL+FQ     Y     + +LKWK    NSVDFL +V    ++      + Y+F +             T ++   Y  KIIECT   D Q     WK MR RTDKS PN
Sbjct:  354 TLVDTEVIIDKVEINGAMCDQPRMLIYDIMRFNSVNVMKEPFYKRFEIIKTEIIDMRTAA------FKTGRLKHENQIMSVRRKDFYDLEATAKLFGPKFVQHVGHEIDGLIFQPKKTKYETGRCDKVLKWKPPSHNSVDFLLKVEKKCKEGMLPEWIGYLFVQNLSDPFGTMKATATLKK---YHNKIIECTLLVDNQGRPKEWKFMRERTDKSLPN 562          
BLAST of FC931033 vs. ExPASy Swiss-Prot
Match: MCE1_MOUSE (mRNA-capping enzyme OS=Mus musculus GN=Rngtt PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.229e-20
Identity = 78/216 (36.11%), Postives = 112/216 (51.85%), Query Frame = 1
Query:  106 TLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLK-EFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVT--------DDDRQLLYV--FERGKKKLMEGSSVEFTDREPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPN 720
            TLLDGEMIIDK+  + +   RYLIYD++  N   V +  F  R + +E+E+I PR+ +       +        EPF VR K F+ ++   KLL+  F  ++SH+ DGL+FQ     Y P   + +LKWK   +NSVDF  ++T          +  LLYV  +ER   ++          +E   Y  KIIEC ++ +   W  MR R DKS PN
Sbjct:  340 TLLDGEMIIDKV--NGQAVPRYLIYDIIKFNAQPVGDCDFNIRLQCIEREIISPRHEKMKTGLIDKTQ------EPFSVRPKQFFDINISRKLLEGNFAKEVSHEMDGLIFQP-IGKYKPGRCDDILKWKPPSLNSVDFRLKITRMGGEGLLPQNVGLLYVGGYERPFAQIK-------VTKELKQYDNKIIECKFENN--SWVFMRQRIDKSFPN 537          
BLAST of FC931033 vs. ExPASy Swiss-Prot
Match: MCE1_SCHPO (mRNA-capping enzyme subunit alpha OS=Schizosaccharomyces pombe GN=ceg1 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.166e-19
Identity = 77/256 (30.08%), Postives = 121/256 (47.27%), Query Frame = 1
Query:   13 MIDRCFSFRRVQMRF-PCRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRN-YERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLF-------EVTDDDRQLLYVFERG---KKKLMEGSSVEFTDRE-----PSF---YSGKIIECTWDPDVQLWKCMRIRTDKSTPN 720
            + DR  +F  V+  F P  N   G  +K H  TLLDGE+++D  P  ++Q  RYL++D +A +    + R   +R  +  K + +P + Y + ++ ++        + PF    K   L   + KL  E IP+L H  DGL+F   + PYV  T + LLKWK   MN++DF+        E  D D   +  F+ G    + +    +  + D +      SF    S +I+EC  D D   W+ +R R DK   N
Sbjct:   91 LFDRKMNFYHVEKIFYPVENDKSG--KKYHVDTLLDGELVLDIYPGGKKQ-LRYLVFDCLACDGIVYMSRLLDKRLGIFAKSIQKPLDEYTKTHMRETA-------IFPFLTSLKKMELGHGILKLFNEVIPRLRHGNDGLIFTCTETPYVSGTDQSLLKWKPKEMNTIDFMLKLEFAQPEEGDIDYSAMPEFQLGVWEGRNMYSFFAFMYVDEKEWEKLKSFNVPLSERIVECYLD-DENRWRFLRFRDDKRDAN 335          
BLAST of FC931033 vs. ExPASy Swiss-Prot
Match: MCE1_CANGA (mRNA-capping enzyme subunit alpha OS=Candida glabrata GN=CEG1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.314e-17
Identity = 84/293 (28.67%), Postives = 132/293 (45.05%), Query Frame = 1
Query:   13 MIDRCFSFRRVQ-MRFPC--RNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEG-LLKWKYARMNSVDF--LFEV--TDDDRQ------------------LLYV-----------------FERGKKKLMEGSSVEFTD--------------REPSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPN 720
            MIDR  ++  V    FP   +   E L E + + TL+DGE++I K P ++ QE RYL++D +AIN  S+++ P   R   L KE  +P  Y+  +IY  +   +     PF++  K      ++ K+    + KL H +DGL+F     PY     +  LLKWK  + NSVDF  + E+  T+D+                     LYV                 F++ + +++E +   F +               EP   +G+I+ECT DP+   W  +R R DK   N
Sbjct:   89 MIDRENNYYLVNGFHFPRLPQKKKEELLETSQNGTLIDGELVIQKNPMTKLQELRYLMFDCLAINGRSLVQSPTSSRLAHLGKEFYKP-YYDLRSIYPDKCATF-----PFKLSMKHMDFSYSLVKVANS-LDKLPHLSDGLIFTPVRTPYAVGGKDSLLLKWKPEQENSVDFKLILEIPMTEDNSVAKKDPRRWYYNYDAKPTFALYVWQGGSDVNTKLQNFEQPFDKREMQVLEKTYKRFAELSISDEQWQELKNLEEP--LNGRIVECTKDPETGSWTMLRFRDDKLNGN 372          
BLAST of FC931033 vs. ExPASy Swiss-Prot
Match: MCE1_CANAL (mRNA-capping enzyme subunit alpha OS=Candida albicans GN=CGT1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.191e-15
Identity = 71/239 (29.71%), Postives = 115/239 (48.12%), Query Frame = 1
Query:   97 HHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEP-RNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTDDDRQLLYVFERG---------------KKKLMEGSSV--EFTDREPSF------------YSGKIIECTWDPDVQ-LWKCMRIRTDKSTPN 720
            HH TLLDGE++++    S     RY+I+D +AI+   +I+RP  +R   + + V++P  N+++HN     +P +     PF+V  K        + +L + + KL H +DGL++   + PYV  T + LLKWK A  N+VDF  E   ++ Q   + ER                K ++ +GS+V  +F   + S               G+I EC      +  W+ +R R DKS  N
Sbjct:  118 HHGTLLDGELVLENRNVSE-PVLRYVIFDALAIHGKCIIDRPLPKRLGYITENVMKPFDNFKKHNPDIVNSPEF-----PFKVGFKTMLTSYHADDVLSK-MDKLFHASDGLIYTCAETPYVFGTDQTLLKWKPAEENTVDFQLEFVFNEVQDPDLDERDPTSTYLDYDAKPNLIKLRVWQGSNVHTDFAKLDLSDDDWERLKALEQPLQGRIAECRQSTTKKGYWEMLRFRNDKSNGN 349          
BLAST of FC931033 vs. ExPASy Swiss-Prot
Match: MCE1_YARLI (mRNA-capping enzyme subunit alpha OS=Yarrowia lipolytica GN=CEG1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.008e-14
Identity = 71/239 (29.71%), Postives = 103/239 (43.10%), Query Frame = 1
Query:   70 SNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFL-------FEVT--------DDDRQLLYVFERGKKKLMEGSSVEFTDRE-------PSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPN 720
            SN+G   K    T++DGE+++ K   +  +   +L++D +A N+  +  RP  +R   L   +  P     H     +NP    D  PF VR KD      V  +   F P L H  DGL+F   D PYV  T E +LKWK    NSVDFL       FE T        D   ++  +   G+        +  TD E             +++EC  D D + W+ +R R DK+  N
Sbjct:  106 SNDG---KPLQDTIVDGELVLTK---AEPRSLHFLMFDCLACNKILLTGRPLDKRLGYLNAAISHPLKEYLH-----KNPEVARDF-PFSVRVKDMQFAYNVMNVFASF-PHLPHITDGLIFTCRDHPYVSGTDERILKWKKQDENSVDFLMTMKFPIFEDTNGESWTDYDAKPEITLLVWTGRDGSRPYGELYLTDEEWDNLKALEEPLEERVVECIKD-DKKRWRYLRFRDDKTNAN 330          
BLAST of FC931033 vs. ExPASy Swiss-Prot
Match: MCE1_DEBHA (mRNA-capping enzyme subunit alpha OS=Debaryomyces hansenii GN=CEG1 PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.720e-14
Identity = 69/255 (27.06%), Postives = 114/255 (44.71%), Query Frame = 1
Query:   49 MRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEP-RNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEV-------------------TDDDRQLLYV----------FERGKKKLMEGSSVEFTDREPSFYSGKIIECTWD-PDVQLWKCMRIRTDKSTPN 720
            + FP  N NE  G+  HH TLLDGE++++   +      R+ I+D +AIN   + +R   +R   + ++V++P  N++R N      P + + +  F++    +     ++K+      +L H++DGL+F   + PYV  T   LLKWK A  N+VD+  E+                   TD D +   +          +E   K  +E    E          G+I+EC     D   W+ +R R DKS  N
Sbjct:  102 IHFPLTN-NEEKGKTYHHGTLLDGELVLET-KNVPEPVLRFCIFDALAINGKDITKRHLPKRLGYITEQVMKPFDNFKRKNPEIVNAPDFPFKVS-FKLMTSSYHADDVLSKM-----DQLFHESDGLIFTCAETPYVFGTDSTLLKWKPAHENTVDYKMEMIFKKFQDPDLDPRDPDSTYTDYDSKPELIKLRVWKGGADYEDFTKLSLENEDWEKLKNLRQPLQGRIVECRKKLSDPGFWEMLRFRNDKSNGN 348          
BLAST of FC931033 vs. ExPASy Swiss-Prot
Match: MCE1_NEUCR (mRNA-capping enzyme subunit alpha OS=Neurospora crassa GN=NCU06260 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.003e-14
Identity = 54/194 (27.84%), Postives = 91/194 (46.91%), Query Frame = 1
Query:   40 RVQMRFPCRNSNEGLGEKTHHFTLLDGEMIIDKLPDSR-RQERRYLIYDMMAIN-QASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPYVPRTHEGLLKWKYARMNSVDFLFEVTDDDRQLLYVFERGKKKLMEGSSVEFTD 615
            R  M FP  N  +      H  T++DGE+++D +P +  R+E R+L++D++A++ +A ++ +P  +R       + EP         Q            F+V  K   L   +  + +E IP L HD+DGL+F     PY   T   +LKWK    N++DF   +         + +  + +L EG   +FTD
Sbjct:  100 RNSMHFPMPNDIQAF----HRGTIIDGELVMDTVPGTNGRKEPRFLVFDLLALDDKAELLNKPLDKRLGYFSAYIYEPYKKLLQQFPQE------IPFMAFKVEMKRMELSYGIETMFREVIPALKHDSDGLIFTCRTTPYHFGTDPHILKWKAPHENTLDFRMRLN------FPLVQATEAELDEGFPEQFTD 277          
BLAST of FC931033 vs. ExPASy Swiss-Prot
Match: MCE1_KLULA (mRNA-capping enzyme subunit alpha OS=Kluyveromyces lactis GN=CEG1 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.003e-14
Identity = 77/291 (26.46%), Postives = 125/291 (42.96%), Query Frame = 1
Query:   13 MIDRCFSFRRVQ-MRFPC--RNSNEGLGEKTHHFTLLDGEMIIDKLPDSRRQERRYLIYDMMAINQASVIERPFYERWKMLEKEVIEPRNYERHNIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIPKLSHDADGLVFQGWDDPY-VPRTHEGLLKWKYARMNSVDFLFEVTD---DDRQL-------------------LYVFERGKK-----------------KLMEGSSVEFTDRE------------PSFYSGKIIECTWDPDVQLWKCMRIRTDKSTPN 720
            MIDR  ++  V   RFPC  R + + L E     TL+DGE+++   P ++ +E RYL++D +A+N  S+++ P   R   L KE  +P  Y+  + +  R   +     PF++  K       + K+ K  +  L H +DGL+F      Y +      LLKWK    N+VDF   +     +D+ L                   LYV++ G                   +L+E +  +F + E                +G+I+EC+ D +   WK +R R DK   N
Sbjct:   90 MIDRENNYYMVNGFRFPCLPRANKKELLETLQDGTLIDGELVMQTNPVTKLKELRYLMFDCLAVNGRSLVQSPTSSRLAHLGKEFFKP-YYDLRSYFPDRCSTF-----PFKISMKHMNFSYDLAKVAKT-LDSLPHVSDGLIFTPVQAAYHIGGKDSYLLKWKPEVENTVDFKLIIEPPVVEDKSLPKSDKNRFYYNYDVKPLFHLYVWQGGNDVNNRIQDFEQPFTKSDLELLERTYRKFAEIEIDDKQWNELKAMEEPLNGRIVECSKDQESGAWKLLRFRDDKLNGN 373          
The following BLAST results are available for this feature:
BLAST of FC931033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
MCE1_HUMAN4.992e-2236.57mRNA-capping enzyme OS=Homo sapiens GN=RNGTT PE=1 ... [more]
MCE1_CAEEL2.477e-2133.94mRNA-capping enzyme OS=Caenorhabditis elegans GN=c... [more]
MCE1_MOUSE1.229e-2036.11mRNA-capping enzyme OS=Mus musculus GN=Rngtt PE=1 ... [more]
MCE1_SCHPO5.166e-1930.08mRNA-capping enzyme subunit alpha OS=Schizosacchar... [more]
MCE1_CANGA6.314e-1728.67mRNA-capping enzyme subunit alpha OS=Candida glabr... [more]
MCE1_CANAL1.191e-1529.71mRNA-capping enzyme subunit alpha OS=Candida albic... [more]
MCE1_YARLI1.008e-1429.71mRNA-capping enzyme subunit alpha OS=Yarrowia lipo... [more]
MCE1_DEBHA1.720e-1427.06mRNA-capping enzyme subunit alpha OS=Debaryomyces ... [more]
MCE1_NEUCR5.003e-1427.84mRNA-capping enzyme subunit alpha OS=Neurospora cr... [more]
MCE1_KLULA5.003e-1426.46mRNA-capping enzyme subunit alpha OS=Kluyveromyces... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34100F11EF PostHarvP1 Citrus clementina cDNA clone C34100F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931033 ID=FC931033; Name=FC931033; organism=Citrus clementina; type=EST; length=721bp
CTTGGCCGGGAGATGATTGATAGGTGTTTCTCTTTTCGAAGGGTCCAGAT
GAGGTTTCCTTGCAGAAACTCAAATGAAGGTTTGGGTGAGAAAACTCATC
ACTTCACATTGCTGGATGGGGAGATGATTATTGACAAATTGCCAGACTCA
CGAAGGCAGGAGAGAAGATACCTTATCTATGATATGATGGCAATTAACCA
AGCGTCTGTCATTGAGCGGCCTTTCTATGAACGGTGGAAGATGCTTGAGA
AAGAAGTCATTGAACCACGGAATTATGAGCGCCACAATATTTACCAGAGT
AGGAACCCTTACTACAGATATGATCTGGAACCATTTAGGGTTAGGAGGAA
AGATTTTTGGTTGCTCTCCACTGTTAACAAGCTGTTAAAGGAGTTTATTC
CAAAGCTTTCGCATGATGCTGATGGTCTTGTTTTCCAGGGCTGGGATGAT
CCTTACGTTCCTCGAACACATGAAGGCCTTTTGAAGTGGAAATATGCTAG
AATGAACTCGGTTGACTTTCTATTTGAGGTGACTGATGATGATCGACAGC
TACTTTATGTATTTGAACGTGGAAAGAAGAAGCTGATGGAAGGGAGTTCA
GTTGAATTTACAGATAGAGAACCGTCTTTTTACTCGGGAAAGATTATTGA
GTGTACTTGGGATCCAGACGTACAGTTATGGAAATGTATGCGGATCAGGA
CTGATAAATCNACCCCGAATG
back to top