FC931039

Overview
NameFC931039
Unique NameFC931039
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9494 contig Ccv1_Contig9494:296..1031. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: NTF3_TOBAC (Mitogen-activated protein kinase homolog NTF3 OS=Nicotiana tabacum GN=NTF3 PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 8.190e-60
Identity = 110/126 (87.30%), Postives = 119/126 (94.44%), Query Frame = 1
Query:  358 MATLVEPPNGMRSRGKHYYMMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            MAT VEPPNG+R+ GKHYY MWQ+LFEIDTKYVPIKPIGRGAYG+VCSS+NRETNEKVAIKKINN FENRIDALRTLREL LLRH++H+NVIALKDVMMP HR SF+DVYLVYELMDTDLHQIIKS
Sbjct:    1 MATPVEPPNGIRTPGKHYYSMWQSLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRIDALRTLRELKLLRHLRHENVIALKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKS 126          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK4_ORYSJ (Mitogen-activated protein kinase 4 OS=Oryza sativa subsp. japonica GN=MPK4 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.112e-59
Identity = 107/126 (84.92%), Postives = 119/126 (94.44%), Query Frame = 1
Query:  358 MATLVEPPNGMRSRGKHYYMMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            MA +V+PPNGM ++GKHYY MWQTLFEIDTKYVPIKPIGRGAYG+VCSSINR TNEKVAIKKINNVF+NR+DALRTLREL LLRH++H+NVIALKD+MMP HR SF+DVYLVYELMDTDLHQIIKS
Sbjct:    1 MAMMVDPPNGMGNQGKHYYTMWQTLFEIDTKYVPIKPIGRGAYGIVCSSINRATNEKVAIKKINNVFDNRVDALRTLRELKLLRHLRHENVIALKDIMMPVHRRSFKDVYLVYELMDTDLHQIIKS 126          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK7_ARATH (Mitogen-activated protein kinase 7 OS=Arabidopsis thaliana GN=MPK7 PE=2 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 4.065e-59
Identity = 108/126 (85.71%), Postives = 120/126 (95.24%), Query Frame = 1
Query:  358 MATLVEPPNGMRSRGKHYYMMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            MA LVEPPNG++ +GKHYY MWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNE+VAIKKI+NVFENR+DALRTLREL LLRH++H+NVIALKDVM+P +R SF+DVYLVYELMDTDLHQIIKS
Sbjct:    1 MAMLVEPPNGIKQQGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNERVAIKKIHNVFENRVDALRTLRELKLLRHVRHENVIALKDVMLPANRSSFKDVYLVYELMDTDLHQIIKS 126          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK1_ARATH (Mitogen-activated protein kinase 1 OS=Arabidopsis thaliana GN=MPK1 PE=1 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 6.933e-59
Identity = 106/126 (84.13%), Postives = 121/126 (96.03%), Query Frame = 1
Query:  358 MATLVEPPNGMRSRGKHYYMMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            MATLV+PPNG+R+ GKHY+ MWQTLFEIDTKY+PIKPIGRGAYGVVCSS+N +TNEKVAIKKI+NV+ENRIDALRTLREL LLRH++H+NVIALKDVMMP H++SF+DVYLVYELMDTDLHQIIKS
Sbjct:    1 MATLVDPPNGIRNEGKHYFSMWQTLFEIDTKYMPIKPIGRGAYGVVCSSVNSDTNEKVAIKKIHNVYENRIDALRTLRELKLLRHLRHENVIALKDVMMPIHKMSFKDVYLVYELMDTDLHQIIKS 126          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MAPK_PETHY (Mitogen-activated protein kinase homolog 1 OS=Petunia hybrida GN=MEK1 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 6.933e-59
Identity = 109/126 (86.51%), Postives = 118/126 (93.65%), Query Frame = 1
Query:  358 MATLVEPPNGMRSRGKHYYMMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            MAT VEPPNG+R+ GKHYY MWQ+LFEIDTKYVPIKPIGRGAYG+VCSS+NRETNEKVAIKKINN FENRIDALRTLREL LLRH++H+NVIALKDVMMP  R SF+DVYLVYELMDTDLHQIIKS
Sbjct:    1 MATPVEPPNGIRTPGKHYYSMWQSLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKINNAFENRIDALRTLRELKLLRHLRHENVIALKDVMMPIQRRSFKDVYLVYELMDTDLHQIIKS 126          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK3_ORYSJ (Mitogen-activated protein kinase 3 OS=Oryza sativa subsp. japonica GN=MPK3 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.183e-58
Identity = 106/126 (84.13%), Postives = 120/126 (95.24%), Query Frame = 1
Query:  358 MATLVEPPNGMRSRGKHYYMMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            MA +V+PPNGM ++GK+YY MWQTLFEIDTKYVPIKPIGRGAYG+VCSSINRETNEKVAIKKI+NVF+NR+DALRTLREL LLRH++H+NVIALKD+MMP HR SF+DVYLVYELMDTDLHQIIKS
Sbjct:    1 MAIMVDPPNGMGNQGKYYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSINRETNEKVAIKKIHNVFDNRVDALRTLRELKLLRHLRHENVIALKDIMMPVHRRSFKDVYLVYELMDTDLHQIIKS 126          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK14_ARATH (Mitogen-activated protein kinase 14 OS=Arabidopsis thaliana GN=MPK14 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.635e-58
Identity = 107/126 (84.92%), Postives = 119/126 (94.44%), Query Frame = 1
Query:  358 MATLVEPPNGMRSRGKHYYMMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            MA LV+PPNG+R  GKHYY MWQTLFEIDTKYVPIKPIGRGAYGVVCSSIN ETNE+VAIKKI+NVFENRIDALRTLREL LLRH++H+NVI+LKDVM+PTHR SF+DVYLVYELMD+DL+QIIKS
Sbjct:    1 MAMLVDPPNGIRQEGKHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINSETNERVAIKKIHNVFENRIDALRTLRELKLLRHVRHENVISLKDVMLPTHRYSFRDVYLVYELMDSDLNQIIKS 126          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK2_ARATH (Mitogen-activated protein kinase 2 OS=Arabidopsis thaliana GN=MPK2 PE=1 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 1.001e-57
Identity = 105/126 (83.33%), Postives = 120/126 (95.24%), Query Frame = 1
Query:  358 MATLVEPPNGMRSRGKHYYMMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            MAT V+PPNG+R++GKHY+ MWQTLFEIDTKYVPIKPIGRGAYGVVCSS+NRE+NE+VAIKKI+NVFENRIDALRTLREL LLRH++H+NV+ALKDVMM  H+ SF+DVYLVYELMDTDLHQIIKS
Sbjct:    1 MATPVDPPNGIRNQGKHYFSMWQTLFEIDTKYVPIKPIGRGAYGVVCSSVNRESNERVAIKKIHNVFENRIDALRTLRELKLLRHLRHENVVALKDVMMANHKRSFKDVYLVYELMDTDLHQIIKS 126          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK4_ARATH (Mitogen-activated protein kinase 4 OS=Arabidopsis thaliana GN=MPK4 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.346e-35
Identity = 72/120 (60.00%), Postives = 94/120 (78.33%), Query Frame = 1
Query:  385 GMRSRGKHY--YMMWQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            G+ + G  Y  Y ++  LFE+  KYVP ++PIGRGAYG+VC++ N ET E+VAIKKI N F+N IDA RTLRE+ LL+H+ H+NVIA+KD++ P  R +F DVY+VYELMDTDLHQII+S
Sbjct:   18 GVATHGGSYVQYNVYGNLFEVSRKYVPPLRPIGRGAYGIVCAATNSETGEEVAIKKIGNAFDNIIDAKRTLREIKLLKHMDHENVIAVKDIIKPPQRENFNDVYIVYELMDTDLHQIIRS 137          
BLAST of FC931039 vs. ExPASy Swiss-Prot
Match: MPK6_ORYSJ (Mitogen-activated protein kinase 6 OS=Oryza sativa subsp. japonica GN=MPK6 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.555e-34
Identity = 70/120 (58.33%), Postives = 92/120 (76.67%), Query Frame = 1
Query:  385 GMRSRGKHY--YMMWQTLFEIDTKYVP-IKPIGRGAYGVVCSSINRETNEKVAIKKINNVFENRIDALRTLRELVLLRHIKHDNVIALKDVMMPTHRISFQDVYLVYELMDTDLHQIIKS 735
            GM + G  Y  Y ++   FE+ +KY P I+PIGRGAYG+VC+++N E  E+VAIKKI N F+N IDA RTLRE+ LLRH+ H+N+IA+KD++ P  R +F DVY+V ELMDTDLHQII+S
Sbjct:   18 GMGTHGGRYVLYNVYGNFFEVSSKYAPPIRPIGRGAYGIVCAAVNSENGEEVAIKKIGNAFDNHIDAKRTLREIKLLRHMDHENIIAIKDIIRPPRRDNFNDVYIVSELMDTDLHQIIRS 137          
The following BLAST results are available for this feature:
BLAST of FC931039 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 178
Match NameE-valueIdentityDescription
NTF3_TOBAC8.190e-6087.30Mitogen-activated protein kinase homolog NTF3 OS=N... [more]
MPK4_ORYSJ3.112e-5984.92Mitogen-activated protein kinase 4 OS=Oryza sativa... [more]
MPK7_ARATH4.065e-5985.71Mitogen-activated protein kinase 7 OS=Arabidopsis ... [more]
MPK1_ARATH6.933e-5984.13Mitogen-activated protein kinase 1 OS=Arabidopsis ... [more]
MAPK_PETHY6.933e-5986.51Mitogen-activated protein kinase homolog 1 OS=Petu... [more]
MPK3_ORYSJ1.183e-5884.13Mitogen-activated protein kinase 3 OS=Oryza sativa... [more]
MPK14_ARATH2.635e-5884.92Mitogen-activated protein kinase 14 OS=Arabidopsis... [more]
MPK2_ARATH1.001e-5783.33Mitogen-activated protein kinase 2 OS=Arabidopsis ... [more]
MPK4_ARATH5.346e-3560.00Mitogen-activated protein kinase 4 OS=Arabidopsis ... [more]
MPK6_ORYSJ1.555e-3458.33Mitogen-activated protein kinase 6 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionC34100G05EF PostHarvP1 Citrus clementina cDNA clone C34100G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931039 ID=FC931039; Name=FC931039; organism=Citrus clementina; type=EST; length=736bp
GATAAATTATTCGCCCTCTCTCTCAGGCTCAGGCTCAGGCTCGGCTCTGA
ATCCGATCGCGACGAGATAAGGAATCTCACAGATCGGATAAACCATTTAG
ATCCCATCGGATCAGACATTCAGAATATAGATGCAATGTAATTTGTATTT
AAGCGACGAACTCGCTGCTCCCCTTTGAATTCCGAATTTTTGTTTTTGAC
GAATCAGCGAAGAAGCTTCTTATATTGCATTCCATTGAGCTGCTTTGGGG
ATGGTTAATTGGCTGAAAAGTGCAAAAGTTTACTACTTGGAAAAGTAGGT
GAGAAGAGAATCAGCGATCGCGAAACATCAAAGCAAACAAGTCGTAGCGG
CAAGGAGATGGCCACTCTGGTTGAACCTCCAAATGGGATGAGGTCAAGAG
GGAAGCATTATTACATGATGTGGCAAACATTGTTTGAAATTGATACAAAG
TACGTTCCAATCAAACCAATTGGTCGGGGAGCATACGGGGTTGTCTGTTC
TTCCATCAATAGGGAGACGAACGAGAAAGTTGCGATCAAGAAGATCAATA
ATGTGTTTGAGAATCGAATCGATGCATTGAGAACTTTGAGGGAGTTGGTG
CTGCTCAGACATATTAAGCATGACAATGTTATTGCTTTGAAGGATGTTAT
GATGCCTACTCATAGGATCAGTTTTCAGGATGTGTATTTGGTTTATGAGC
TCATGGACACGGACTTGCATCAGATTATCAAATCTT
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