FC931065

Overview
NameFC931065
Unique NameFC931065
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length725
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931065 vs. ExPASy Swiss-Prot
Match: DRP3A_ARATH (Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A PE=1 SV=2)

HSP 1 Score: 266.929 bits (681), Expect = 7.655e-71
Identity = 143/231 (61.90%), Postives = 170/231 (73.59%), Query Frame = 1
Query:   31 RAILARQVNGIMADQGVRPTVEVEKVAPAGNTXXXXXXXXXXXXXXDNRVPAGKESVTNKPFSEPVQNVEHAFAMIHLREPPTILRPSESHSEQENVEIAVTKLLLRSYYDIVRKNIEDSIPKAVMHFLVNHTKRELHNVFIKKLYRENLFEEMLQEPEEVAMKRKRTRDTLRVLQQAFRTLDELPLEADSVERGYNMSADPTGLPKIHGLPTSSMYTTSSGSNDSYTASP 723
            R+ L RQ NGI+ DQGV  + + EK  PA N               D R    K+S+ NKPFSE V+++ H  +MI+L+EPP +LRP+E+HSEQE VEI +TKLLLRSYYDIVRKNIEDS+PKA+MHFLVNHTKRELHNVFIKKLYRENLFEEMLQEP+E+A+KRKRT++TL VLQQA+RTLDELPLEADSV           G+ K   L TSS Y+TSS    SY+ASP
Sbjct:  574 RSFLGRQANGIVTDQGV-VSADAEKAQPAANASDTRWGIPSIFRGGDTRAVT-KDSLLNKPFSEAVEDMSHNLSMIYLKEPPAVLRPTETHSEQEAVEIQITKLLLRSYYDIVRKNIEDSVPKAIMHFLVNHTKRELHNVFIKKLYRENLFEEMLQEPDEIAVKRKRTQETLHVLQQAYRTLDELPLEADSVS---------AGMSKHQELLTSSKYSTSS----SYSASP 789          
BLAST of FC931065 vs. ExPASy Swiss-Prot
Match: DRP3B_ARATH (Dynamin-related protein 3B OS=Arabidopsis thaliana GN=DRP3B PE=1 SV=2)

HSP 1 Score: 242.662 bits (618), Expect = 1.546e-63
Identity = 126/224 (56.25%), Postives = 160/224 (71.43%), Query Frame = 1
Query:   31 RAILARQVNGIMADQGVRPTVEVEKVAPAGNTXXXXXXXXXXXXXXDNRVPAGKESVTNKPFSEPVQNVEHAFAMIHLREPPTILRPSESHSEQENVEIAVTKLLLRSYYDIVRKNIEDSIPKAVMHFLVNHTKRELHNVFIKKLYRENLFEEMLQEPEEVAMKRKRTRDTLRVLQQAFRTLDELPLEADSVERGYNMSADPTGLPKIHGLPTSSMYTTSSGSN 702
            R+ L RQ NGI+ DQ V    + E+ APAG+T                   A K ++ NKPFSE  Q V    + I+L+EPPTIL+ SE+HSEQE+VEI +TKLLL+SYYDIVRKN+ED +PKA+MHFLVN+TKRELHNVFI+KLYRENL EE+L+EP+E+A+KRKRT++TLR+LQQA RTLDELPLEA+SVERGY + ++     K   LP +    T +  N
Sbjct:  559 RSFLGRQANGIITDQAVPTAADAERPAPAGSTSWSGFSSIFRGSDGQ---AAAKNNLLNKPFSETTQEVYQNLSTIYLKEPPTILKSSETHSEQESVEIEITKLLLKSYYDIVRKNVEDLVPKAIMHFLVNYTKRELHNVFIEKLYRENLIEELLKEPDELAIKRKRTQETLRILQQANRTLDELPLEAESVERGYKIGSE----AKHEELPGTRRSRTETNGN 775          
BLAST of FC931065 vs. ExPASy Swiss-Prot
Match: DYNA_DICDI (Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.978e-18
Identity = 39/108 (36.11%), Postives = 74/108 (68.52%), Query Frame = 1
Query:  262 LREPPTILRPSESHSEQENVEIAVTKLLLRSYYDIVRKNIEDSIPKAVMHFLVNHTKRELHNVFIKKLYRENLFEEMLQEPEEVAMKRKRTRDTLRVLQQAFRTLDEL 585
            L + P+I++  +  + +E  E  + + LL SY++IV+KN++DS+PK++MHFLVN +K  + N  +  LY+E LF+E+L+E  +++ KRK  +  + +L++A   ++E+
Sbjct:  741 LNQVPSIIKAPDDLTSKEKFETELIRELLISYFNIVKKNVKDSVPKSIMHFLVNQSKEHIQNELVAALYKEELFDELLEESPQISSKRKSCKAMIEILRKANEIINEI 848          
BLAST of FC931065 vs. ExPASy Swiss-Prot
Match: DNM1L_RAT (Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm1l PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17
Identity = 46/110 (41.82%), Postives = 72/110 (65.45%), Query Frame = 1
Query:  256 IHLREPPTILRPSESHSEQENVEIAVTKLLLRSYYDIVRKNIEDSIPKAVMHFLVNHTKRELHNVFIKKLYRENLFEEMLQEPEEVAMKRKRTRDTLRVLQQAFRTLDEL 585
            ++L + P  +    S  EQ + E  V + L++SY+ IVRKNI+DS+PKAVMHFLVNH K  L +  + +LY+ +L +++L E E++A +RK   D L+ LQ A + + E+
Sbjct:  642 VNLLDVPVPVARKLSAREQRDCE--VIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQIIAEI 749          
BLAST of FC931065 vs. ExPASy Swiss-Prot
Match: DNM1L_MOUSE (Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17
Identity = 46/110 (41.82%), Postives = 72/110 (65.45%), Query Frame = 1
Query:  256 IHLREPPTILRPSESHSEQENVEIAVTKLLLRSYYDIVRKNIEDSIPKAVMHFLVNHTKRELHNVFIKKLYRENLFEEMLQEPEEVAMKRKRTRDTLRVLQQAFRTLDEL 585
            ++L + P  +    S  EQ + E  V + L++SY+ IVRKNI+DS+PKAVMHFLVNH K  L +  + +LY+ +L +++L E E++A +RK   D L+ LQ A + + E+
Sbjct:  629 VNLLDVPVPVARKLSAREQRDCE--VIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQIIAEI 736          
BLAST of FC931065 vs. ExPASy Swiss-Prot
Match: DNM1L_HUMAN (Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17
Identity = 46/110 (41.82%), Postives = 72/110 (65.45%), Query Frame = 1
Query:  256 IHLREPPTILRPSESHSEQENVEIAVTKLLLRSYYDIVRKNIEDSIPKAVMHFLVNHTKRELHNVFIKKLYRENLFEEMLQEPEEVAMKRKRTRDTLRVLQQAFRTLDEL 585
            ++L + P  +    S  EQ + E  V + L++SY+ IVRKNI+DS+PKAVMHFLVNH K  L +  + +LY+ +L +++L E E++A +RK   D L+ LQ A + + E+
Sbjct:  623 VNLLDVPVPVARKLSAREQRDCE--VIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQIIAEI 730          
BLAST of FC931065 vs. ExPASy Swiss-Prot
Match: DNM1L_BOVIN (Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17
Identity = 46/110 (41.82%), Postives = 72/110 (65.45%), Query Frame = 1
Query:  256 IHLREPPTILRPSESHSEQENVEIAVTKLLLRSYYDIVRKNIEDSIPKAVMHFLVNHTKRELHNVFIKKLYRENLFEEMLQEPEEVAMKRKRTRDTLRVLQQAFRTLDEL 585
            ++L + P  +    S  EQ + E  V + L++SY+ IVRKNI+DS+PKAVMHFLVNH K  L +  + +LY+ +L +++L E E++A +RK   D L+ LQ A + + E+
Sbjct:  636 VNLLDVPVPVARKLSAREQRDCE--VIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDTLQSELVGQLYKSSLLDDLLTESEDMAQRRKEAADMLKALQGASQIIAEI 743          
BLAST of FC931065 vs. ExPASy Swiss-Prot
Match: DNM1L_DANRE (Dynamin-1-like protein OS=Danio rerio GN=dnm1l PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.365e-17
Identity = 45/110 (40.91%), Postives = 71/110 (64.55%), Query Frame = 1
Query:  256 IHLREPPTILRPSESHSEQENVEIAVTKLLLRSYYDIVRKNIEDSIPKAVMHFLVNHTKRELHNVFIKKLYRENLFEEMLQEPEEVAMKRKRTRDTLRVLQQAFRTLDEL 585
            ++L + P  +    S  EQ + E  V + L++SY+ IVRKNI+DS+PKAVMHFLVNH K  L +  + +LY+  L +++L E E++A +R    D L+ LQ+A + + E+
Sbjct:  578 VNLLDVPVPVARKLSAREQRDCE--VIERLIKSYFLIVRKNIQDSVPKAVMHFLVNHVKDSLQSELVGQLYKPALLDDLLTESEDMAQRRNEAADMLKALQKASQVIAEI 685          
BLAST of FC931065 vs. ExPASy Swiss-Prot
Match: YB68_SCHPO (Dynamin-like protein C12C2.08 OS=Schizosaccharomyces pombe GN=SPBC12C2.08 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.123e-13
Identity = 38/90 (42.22%), Postives = 56/90 (62.22%), Query Frame = 1
Query:  295 ESHSEQENVEIAVTKLLLRSYYDIVRKNIEDSIPKAVMHFLVNHTKRELHNVFIKKLYRENLFEEMLQEPEEVAMKRKRTRDTLRVLQQA 564
            E  SE+E VE+ + K L+ SY+++ RK I D +PK +MH LVN +K  + N  + KLYRE+ F+ +L E E V  +R++    L V  QA
Sbjct:  684 EDMSEREEVEVDLIKELITSYFNLTRKIIIDQVPKVIMHLLVNASKDAIQNRLVSKLYREDFFDTLLIEDENVKSEREKCERLLSVYNQA 773          
BLAST of FC931065 vs. ExPASy Swiss-Prot
Match: DNM1_YEAST (Dynamin-related protein DNM1 OS=Saccharomyces cerevisiae GN=DNM1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 38/87 (43.68%), Postives = 58/87 (66.67%), Query Frame = 1
Query:  304 SEQENVEIAVTKLLLRSYYDIVRKNIEDSIPKAVMHFLVNHTKRELHNVFIKKLYRENLFEEMLQEPEEVAMKRKRTRDTLRVLQQA 564
            +E+E +E  + K L+ SY+DI+R+ IED +PKAVM  LVN+ K  + N  + KLY+E LFEE+L E + +A  R+    +L V ++A
Sbjct:  663 TEREELECELIKRLIVSYFDIIREMIEDQVPKAVMCLLVNYCKDSVQNRLVTKLYKETLFEELLVEDQTLAQDRELCVKSLGVYKKA 749          
The following BLAST results are available for this feature:
BLAST of FC931065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
DRP3A_ARATH7.655e-7161.90Dynamin-related protein 3A OS=Arabidopsis thaliana... [more]
DRP3B_ARATH1.546e-6356.25Dynamin-related protein 3B OS=Arabidopsis thaliana... [more]
DYNA_DICDI1.978e-1836.11Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1... [more]
DNM1L_RAT2.187e-1741.82Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm... [more]
DNM1L_MOUSE2.187e-1741.82Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE... [more]
DNM1L_HUMAN2.187e-1741.82Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE... [more]
DNM1L_BOVIN2.187e-1741.82Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2... [more]
DNM1L_DANRE6.365e-1740.91Dynamin-1-like protein OS=Danio rerio GN=dnm1l PE=... [more]
YB68_SCHPO1.123e-1342.22Dynamin-like protein C12C2.08 OS=Schizosaccharomyc... [more]
DNM1_YEAST3.269e-1343.68Dynamin-related protein DNM1 OS=Saccharomyces cere... [more]

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Properties
Property NameValue
Genbank descriptionC34101A08EF PostHarvP1 Citrus clementina cDNA clone C34101A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931065 ID=FC931065; Name=FC931065; organism=Citrus clementina; type=EST; length=725bp
CCGGAGGAGATCGAGAGAAGCTTAATCCCTCGAGCTATTCTTGCAAGACA
AGTCAATGGAATCATGGCTGATCAGGGAGTTCGTCCCACAGTGGAAGTTG
AAAAAGTAGCTCCCGCTGGAAACACAAGTGGTTCAAGTTGGGGGATTTCA
TCAATTTTTGGGGGGAGTGATAACCGTGTGCCTGCTGGCAAGGAGAGCGT
AACAAACAAGCCATTCAGTGAGCCTGTCCAGAACGTGGAGCATGCTTTTG
CTATGATCCATTTGAGAGAGCCTCCAACCATCTTGAGGCCCTCAGAAAGC
CATTCAGAACAGGAGAATGTTGAAATTGCAGTGACAAAATTGCTGTTGAG
ATCATACTATGATATTGTTCGGAAGAATATTGAGGACTCAATACCTAAAG
CAGTTATGCATTTCCTGGTGAATCATACCAAACGTGAGCTGCATAATGTC
TTCATTAAAAAGCTTTACAGAGAAAACCTGTTTGAAGAGATGCTTCAGGA
GCCTGAGGAGGTAGCAATGAAGAGAAAGCGTACACGAGACACACTCCGAG
TTCTTCAGCAAGCTTTTCGGACATTGGATGAATTGCCATTAGAAGCTGAT
TCAGTTGAGAGGGGATACAATATGAGCGCTGATCCCACAGGACTGCCAAA
GATCCATGGACTGCCGACGTCGTCTATGTATACTACCAGCAGTGGTTCAA
ATGATTCCTATACAGCTTCTCCAAA
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