FC931106
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931106 vs. ExPASy Swiss-Prot
Match: PR1A1_ARATH (PRA1 family protein A1 OS=Arabidopsis thaliana GN=PRA1A1 PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.817e-70 Identity = 130/179 (72.63%), Postives = 142/179 (79.33%), Query Frame = 2 Query: 176 MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFIMITVILGLGFLRRPVXXXXXXXXXXXXXFLNDSFAGTFNEKVTRTVRQFSPHLAAKMRPPLTPVIRGRPSAKRAIYICGRPRWVFVLIFSCVSFILWYVSCGLLTVLWALAXGLLCTIL 712 MDWGNVT +DL DALREVDWSSPPRP SEFFSRFTVP+S KW+SRLKCNLYYYRTNYFIMI VILGLG L RP+ FLNDSFAG+F+EK TRTVR+FSP LAAKMRPPLTPV RGRPS+KRAI++CG+PRWVFVL S VSF LWY+S GLL V AL L TIL Sbjct: 1 MDWGNVTVDDLFDALREVDWSSPPRPPSEFFSRFTVPKSVPKWDSRLKCNLYYYRTNYFIMIVVILGLGVLTRPLAIFAALLTALSLAFLNDSFAGSFSEKATRTVRRFSPQLAAKMRPPLTPVTRGRPSSKRAIHVCGQPRWVFVLTCSLVSFALWYISSGLLRVSVALLIAHLATIL 179
BLAST of FC931106 vs. ExPASy Swiss-Prot
Match: PR1A2_ARATH (PRA1 family protein A2 OS=Arabidopsis thaliana GN=PRA1A2 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 4.078e-61 Identity = 106/179 (59.22%), Postives = 131/179 (73.18%), Query Frame = 2 Query: 176 MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFIMITVILGLGFLRRPVXXXXXXXXXXXXXFLNDSFAGTFNEKVTRTVRQFSPHLAAKMRPPLTPVIRGRPSAKRAIYICGRPRWVFVLIFSCVSFILWYVSCGLLTVLWALAXGLLCTIL 712 MDW NV AED+I+ALREV+WS+PPR EFFSRF PRS +KW SRLKCNLYYYRTNYFI++ +LGL + RP+ FLNDSFA +FNEK RT+R FSPH+AAKMRPP PVIRGR +A++ +Y+CG+PRWVFV+ F S ++W+ SCGLL VL+AL L I+ Sbjct: 1 MDWDNVAAEDVIEALREVEWSTPPRSFGEFFSRFAFPRSFSKWKSRLKCNLYYYRTNYFILVIFVLGLALVTRPLALVGAALTALSIAFLNDSFAASFNEKFIRTIRHFSPHMAAKMRPPHMPVIRGRSTARKTVYVCGKPRWVFVITFLTASLVMWFSSCGLLWVLYALLTSLAVIIV 179
BLAST of FC931106 vs. ExPASy Swiss-Prot
Match: PR1A3_ARATH (PRA1 family protein A3 OS=Arabidopsis thaliana GN=PRA1A3 PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.643e-60 Identity = 109/179 (60.89%), Postives = 132/179 (73.74%), Query Frame = 2 Query: 176 MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRFTVPRSSAKWNSRLKCNLYYYRTNYFIMITVILGLGFLRRPVXXXXXXXXXXXXXFLNDSFAGTFNEKVTRTVRQFSPHLAAKMRPPLTPVIRGRPSAKRAIYICGRPRWVFVLIFSCVSFILWYVSCGLLTVLWALAXGLLCTIL 712 MDW +V AED+I+ALREV+WS+ PR L+EFFSRF PRS +KW SRLKCNLYYYRTNYFI+ +LGL + RP+ FLNDSFA TFNEK+ RT+R FSPHLAAKMRPP PVIRGR + ++ +YICG+PR VFVL+ SF+LW+ SCGLL VL+AL LL +L Sbjct: 1 MDWDSVAAEDVIEALREVEWSASPRSLAEFFSRFAFPRSFSKWMSRLKCNLYYYRTNYFILFVFVLGLALITRPLAILGAALTALSLAFLNDSFAATFNEKMIRTIRHFSPHLAAKMRPPHMPVIRGRSATRKTVYICGQPRLVFVLLGLTASFVLWFTSCGLLWVLYALTTALLMILL 179 The following BLAST results are available for this feature:
BLAST of FC931106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931106 ID=FC931106; Name=FC931106; organism=Citrus clementina; type=EST; length=713bpback to top |