FC931109
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931109 vs. ExPASy Swiss-Prot
Match: ATG3_ARATH (Autophagy-related protein 3 OS=Arabidopsis thaliana GN=ATG3 PE=2 SV=2) HSP 1 Score: 290.812 bits (743), Expect = 4.911e-78 Identity = 146/205 (71.22%), Postives = 169/205 (82.44%), Query Frame = 2 Query: 107 MELQHKFYGIFKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDNDGWLATHGKPKAKCDEDEDDNLPSMEAVEISNNNNVRAISTYFGGXXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLVAHEPE**YILRTRTYDIS 721 M L K + FKGTVE+IT RT+SAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESG+ SKRK YLP+DKQFLITRNVPCLRRAASV E+YE AGGE+LVD+EDNDGWLATHGKPK K E+DNLPSM+A++I+ N +++I TYFGG DIPDM E++E D+++EN DPATL STYLVAHEP+ ILRTRTYD+S Sbjct: 1 MVLSQKLHEAFKGTVERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGDASKRKPYLPSDKQFLITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPKDK--GKEEDNLPSMDALDINEKNTIQSIPTYFGG---EEDDDIPDMEEFDEADNVVEN--DPATLQSTYLVAHEPDDDNILRTRTYDLS 198
BLAST of FC931109 vs. ExPASy Swiss-Prot
Match: ATG3_DICDI (Autophagy-related protein 3 OS=Dictyostelium discoideum GN=atg3 PE=3 SV=3) HSP 1 Score: 123.635 bits (309), Expect = 1.038e-27 Identity = 85/236 (36.02%), Postives = 120/236 (50.85%), Query Frame = 2 Query: 104 IMELQHKFYGIFKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGA-GGEILVDNEDNDGWLATHGKPKAKCDEDEDD--------------NLPSMEAVEISNNNNVRAISTYFGGXXXXXXXDIPDMAEYNEPDSIIENETDPATL-----PSTYLVAHE----------PE**YILRTRTYDIS 721 + Q + + TVEK+T + S F E+GVL+ EFV AGD L KC TW+WESG+PS+ SYLP +KQFL+TRNVPC R ++E E + + EI ++++ D W+A +P D+ ED+ N + + +NNNN DIPD+ ++ + D+IIE E DPA L +T A+ + ILRTRTYDIS Sbjct: 2 LTSFQQAVHKAYVKTVEKVTPTLSTSKFLEEGVLTPEEFVQAGDLLTDKCQTWTWESGDPSRNVSYLPKEKQFLLTRNVPCYNRVRTLENESKASKADEIQIEDDGEDSWVAP--QPVGNQDDIEDEKVDISSLKIDDKKPNTTTTTTAKPTNNNN-----NNNDDEDEDEDGDIPDLDDFQD-DNIIEEE-DPAVLSKNNKTTTTTTANNNNNNNSENKVEDNDNILRTRTYDIS 228
BLAST of FC931109 vs. ExPASy Swiss-Prot
Match: ATG3_DANRE (Autophagy-related protein 3 OS=Danio rerio GN=atg3 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.716e-22 Identity = 77/209 (36.84%), Postives = 103/209 (49.28%), Query Frame = 2 Query: 131 GIFKGTVEKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDND-GWLAT-HGKPKAKCDEDEDDNLPSMEAVEISNNNNVRA-ISTYFGGXXXXXXXD----IPDMAEYNEPDSIIENETDPATLPSTYLV------AHEPE**YILRTRTYDI 718 G G E +T S FKE GV++ EFV AGD+LV CPTW W SGE +K K YLP DKQFL+TRNVPC +R +E E E +++ +D D GW+ T H E ++ + + N +N+ + T G D DM EY E + ETD ATL ++ + A IL+TRTYD+ Sbjct: 10 GTALGVAEFLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWKWASGEEAKVKPYLPNDKQFLLTRNVPCYKRCKQMEYSDE---LEAIIEEDDGDGGWVDTFHNSGVTGVTE-------AVREISLDNKDNMNMNVKTGACGNSGDDDDDEEGEAADMEEYEESGLL---ETDDATLDTSKMADLSKTKAEAGGEDAILQTRTYDL 205
BLAST of FC931109 vs. ExPASy Swiss-Prot
Match: ATG3_MOUSE (Autophagy-related protein 3 OS=Mus musculus GN=Atg3 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.236e-21 Identity = 70/198 (35.35%), Postives = 101/198 (51.01%), Query Frame = 2 Query: 152 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDND-GWLATHGKP--KAKCDEDEDDNLPSMEAVEISNNNNVRAISTYFGGXXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLV------AHEPE**YILRTRTYDI 718 E +T S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP DKQFL+T+NVPC +R +E E E +++ +D D GW+ T+ + ++ L S +++++ + S + DM EY E + ETD ATL + +V A IL+TRTYD+ Sbjct: 17 EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTDKQFLVTKNVPCYKRCKQMEYSDE---LEAIIEEDDGDGGWVDTYHNTGITGITEAVKEITLESKDSIKLQD------CSALCDEEDEEDEGEAADMEEYEESGLL---ETDEATLDTRKIVEACKAKADAGGEDAILQTRTYDL 202
BLAST of FC931109 vs. ExPASy Swiss-Prot
Match: ATG3_HUMAN (Autophagy-related protein 3 OS=Homo sapiens GN=ATG3 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.414e-21 Identity = 71/199 (35.68%), Postives = 99/199 (49.75%), Query Frame = 2 Query: 152 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDND-GWLAT-HGKPKAKCDEDEDDNLPSMEAVEISNNNNVRA--ISTYFGGXXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLV------AHEPE**YILRTRTYDI 718 E +T S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP KQFL+T+NVPC +R +E E E +++ +D D GW+ T H E +++ + + N +N+R S + DM EY E + ETD ATL + +V IL+TRTYD+ Sbjct: 17 EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDE---LEAIIEEDDGDGGWVDTYHNTGITGITE-------AVKEITLENKDNIRLQDCSALCEEEEDEDEGEAADMEEYEESGLL---ETDEATLDTRKIVEACKAKTDAGGEDAILQTRTYDL 202
BLAST of FC931109 vs. ExPASy Swiss-Prot
Match: ATG3_PENCW (Autophagy-related protein 3 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=atg3 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.606e-20 Identity = 64/167 (38.32%), Postives = 84/167 (50.30%), Query Frame = 2 Query: 179 SAFKEKGVLSVSEFVLAGDNLVSKCPTWSW-ESGEPSKRKSYLPADKQFLITRNVPCLRRA-------ASVEEEY------EGAGGEILVDNEDNDGWLATHGKPKAKCDEDEDDNLPSMEAVEISNNNNVRAISTYFGGXXXXXXXDIPDMAEYNEPDSIIENETD 637 S F+ G ++ EFVLAGD LV K PTWSW ++ P+KR SYLP KQFL+TR VPC RR A +E+E G GGE V ++ DGWL T G A D D+ + + +VR + DIPDM + ++ + I ETD Sbjct: 22 STFRNTGQITPEEFVLAGDYLVYKFPTWSWADASSPAKRVSYLPDGKQFLVTRGVPCHRRLNDNFAGDAGLEDEIVRDFLSGGDGGEGTVADDGEDGWLRTGGGRDAGADHDKQE----------ARIRDVRTVDESGNLGEQEEDDDIPDMEDEDDDEEAIIRETD 178
BLAST of FC931109 vs. ExPASy Swiss-Prot
Match: ATG3_RAT (Autophagy-related protein 3 OS=Rattus norvegicus GN=Atg3 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.097e-20 Identity = 69/198 (34.85%), Postives = 100/198 (50.51%), Query Frame = 2 Query: 152 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDND-GWLATHGKP--KAKCDEDEDDNLPSMEAVEISNNNNVRAISTYFGGXXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLV------AHEPE**YILRTRTYDI 718 E +T S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP KQFL+T+NVPC +R +E E E +++ +D D GW+ T+ + ++ L S +++++ + S + DM EY E + ETD ATL + +V A IL+TRTYD+ Sbjct: 17 EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDE---LEAIIEEDDGDGGWVDTYHNTGITGITEAVKEITLESKDSIKLQD------CSVLCDEEEEEEEGEAADMEEYEESGLL---ETDEATLDTRRIVEACKAKADAGGEDAILQTRTYDL 202
BLAST of FC931109 vs. ExPASy Swiss-Prot
Match: ATG3_BOVIN (Autophagy-related protein 3 OS=Bos taurus GN=ATG3 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.577e-20 Identity = 71/198 (35.86%), Postives = 101/198 (51.01%), Query Frame = 2 Query: 152 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDND-GWLAT-HGKPKAKCDED-EDDNLPSMEAVEISNNNNVRAISTYFGGXXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYLV------AHEPE**YILRTRTYDI 718 E +T S FKE GV++ EFV AGD+LV CPTW W +GE K K+YLP+ KQFL+T+NVPC +R +E E E +++ +D D GW+ T H A E ++ L S +++++ + S + DM EY E + ETD ATL + +V IL+TRTYD+ Sbjct: 17 EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPSGKQFLVTKNVPCYKRCKQMEYSDE---LEAIIEEDDGDGGWVDTYHNTGIAGITEAVKEITLESKDSIKLQD------CSALCEEEEEEDEGEAADMEEYEESGLL---ETDEATLDTRKIVEACKAKTDAGGEDAILQTRTYDL 202
BLAST of FC931109 vs. ExPASy Swiss-Prot
Match: ATG3_XENTR (Autophagy-related protein 3 OS=Xenopus tropicalis GN=atg3 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.775e-19 Identity = 68/197 (34.52%), Postives = 104/197 (52.79%), Query Frame = 2 Query: 152 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDND-GWLAT-HGKPKAKCDEDEDDNLPSMEAVEISNNNNVRAISTYFGGXXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYL-VAHEPE**Y-----ILRTRTYDI 718 E +T S FKE GV++ EF+ AGD+LV CPTW W +GE SK K YLP DKQFL+T+NVPC +R +E E E +++ +D D GW+ T H + ++ L + + + ++N V + DM +Y E +++N D AT+ ++ + A +P+ IL+TRTYD+ Sbjct: 17 EYLTPVLKESKFKETGVITPEEFLAAGDHLVHHCPTWQWSAGEESKIKPYLPNDKQFLMTKNVPCYKRCKQMEYSDE---QEAIIEEDDGDGGWVDTFHHSLTGVTEAVKEITLETQDCGKTTSNIAV-------DDDDDDDEGEAADMEDYEE-SGLLDN--DDATVDTSKIKEACKPKADLGGEDAILQTRTYDL 200
BLAST of FC931109 vs. ExPASy Swiss-Prot
Match: ATG3_XENLA (Autophagy-related protein 3 OS=Xenopus laevis GN=atg3 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.319e-19 Identity = 69/198 (34.85%), Postives = 104/198 (52.53%), Query Frame = 2 Query: 152 EKITSHRTVSAFKEKGVLSVSEFVLAGDNLVSKCPTWSWESGEPSKRKSYLPADKQFLITRNVPCLRRAASVEEEYEGAGGEILVDNEDND-GWLAT--HGKPKAKCDEDEDDNLPSMEAVEISNNNNVRAISTYFGGXXXXXXXDIPDMAEYNEPDSIIENETDPATLPSTYL-VAHEPE**Y-----ILRTRTYDI 718 E +T S FKE GV++ EF+ AGD+LV CPTW W +GE SK K YLP DKQFL+T+NVPC +R +E E E +++ +D D GW+ T H + ++ L + + + ++N V + DM +Y E ++EN D AT+ ++ + A +P+ IL+TRTYD+ Sbjct: 17 EYLTPVLKESKFKETGVITPEEFLAAGDHLVHHCPTWQWSAGEESKIKPYLPNDKQFLMTKNVPCYKRCKQMEYSDE---QEAIIEEDDGDGGWVDTFHHTGLSGVTEAVKEITLETQDCGKTTDNIAV-------CDDDDDDEGEAADMEDYEE-SGLLEN--DDATVDTSKIKEACKPKADLGGEDAILQTRTYDL 201 The following BLAST results are available for this feature:
BLAST of FC931109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931109 ID=FC931109; Name=FC931109; organism=Citrus clementina; type=EST; length=722bpback to top |