FC931112

Overview
NameFC931112
Unique NameFC931112
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14473 contig Ccv1_Contig14473:1..766. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 355.91 bits (912), Expect = 7.562e-99
Identity = 166/201 (82.59%), Postives = 179/201 (89.05%), Query Frame = 1
Query:  112 IVEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQG-TRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            I E FDFHEKELESEE LW LYERWRSHHTVSRSL EK KRFNVFK N MHVH  NKMDKPYKLKLNKFADMTNHEF +TY+GSK+KHHRMF+G  RGNGTFMY KV ++P+SVDWRKKG+VT+VKDQGQCGSCWAFSTI AVEGIN I TNKLVSLSEQELVDCDTDQNQGCNGGLM+ AFEFIK++GG+ TEA YPY A
Sbjct:   17 ITESFDFHEKELESEESLWGLYERWRSHHTVSRSLHEKQKRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEA 217          

HSP 2 Score: 26.5646 bits (57), Expect = 7.562e-99
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 3
Query:  699 PLPSYDGTCDVFKE 740
            P  +YDGTCDV KE
Sbjct:  214 PYEAYDGTCDVSKE 227          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 355.525 bits (911), Expect = 1.804e-97
Identity = 165/202 (81.68%), Postives = 181/202 (89.60%), Query Frame = 1
Query:  109 GIVEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTR-GNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            G+   FDFHEK+LESEE LWDLYERWRSHHTVSRSL EKHKRFNVFK NVMHVH TNKMDKPYKLKLNKFADMTNHEF STYAGSK+ HH+MF+G++ G+GTFMY KV S+P+SVDWRKKG+VT VKDQGQCGSCWAFSTI AVEGIN I TNKLVSLSEQELVDCD ++NQGCNGGLME AFEFIK+KGG+ TE+ YPY A
Sbjct:   18 GVANSFDFHEKDLESEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKANVMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHHKMFRGSQHGSGTFMYEKVGSVPASVDWRKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYTA 219          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 344.739 bits (883), Expect = 3.184e-94
Identity = 160/202 (79.21%), Postives = 175/202 (86.63%), Query Frame = 1
Query:  109 GIVEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGT-RGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            G+   FDFH+K+L SEE LWDLYERWRSHHTVSRSL EKHKRFNVFK N+MHVH TNKMDKPYKLKLNKFADMTNHEF STYAGSK+ H RMF+GT   NG FMY KV S+P SVDWRKKG+VT VKDQGQCGSCWAFST+ AVEGIN I TNKLV+LSEQELVDCD ++NQGCNGGLME AFEFIK+KGG+ TE+ YPY A
Sbjct:   18 GVANSFDFHDKDLASEESLWDLYERWRSHHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKEENQGCNGGLMESAFEFIKQKGGITTESNYPYKA 219          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.391e-73
Identity = 134/201 (66.67%), Postives = 160/201 (79.60%), Query Frame = 1
Query:  112 IVEGFDFHEKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTN-KMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGN-GTFMYGKVTSIPS-SVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            I +   F EK+L SE+ LW+LYE+WR+HHTV+R LDEK++RFNVFK+NV  +H+ N K D PYKL LNKF DMTN EF S YAGSKI+HHR  +G + N G+FMY  V S+P+ S+DWR KG+VT VKDQGQCGSCWAFSTIA+VEGIN I T +LVSLSEQELVDCDT  N+GCNGGLM+ AFEFI +K G+ TE  YPY
Sbjct:   19 IAQSIPFTEKDLASEDSLWNLYEKWRTHHTVARDLDEKNRRFNVFKENVKFIHEFNQKKDAPYKLALNKFGDMTNQEFRSKYAGSKIQHHRSQRGIQKNTGSFMYENVGSLPAASIDWRAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCDTSYNEGCNGGLMDYAFEFI-QKNGITTEDSYPY 218          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.397e-57
Identity = 112/195 (57.44%), Postives = 135/195 (69.23%), Query Frame = 1
Query:  136 EKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKM-DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYG--KVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            +K+LESEE LWDLYERW+S H V R   EKH+RF  FK N   +H  NK  D PY+L LN+F DM   EF +T+ G  ++     +     G FMY    V+ +P SVDWR+KG+VT VKDQG+CGSCWAFST+ +VEGIN I T  LVSLSEQEL+DCDT  N GC GGLM+ AFE+IK  GG+ TEA YPY A
Sbjct:   33 DKDLESEEALWDLYERWQSAHRVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGD-LRRDTPSKPPSVPG-FMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRA 225          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.397e-57
Identity = 112/195 (57.44%), Postives = 135/195 (69.23%), Query Frame = 1
Query:  136 EKELESEEGLWDLYERWRSHHTVSRSLDEKHKRFNVFKQNVMHVHQTNKM-DKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYG--KVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPYXA 711
            +K+LESEE LWDLYERW+S H V R   EKH+RF  FK N   +H  NK  D PY+L LN+F DM   EF +T+ G  ++     +     G FMY    V+ +P SVDWR+KG+VT VKDQG+CGSCWAFST+ +VEGIN I T  LVSLSEQEL+DCDT  N GC GGLM+ AFE+IK  GG+ TEA YPY A
Sbjct:   33 DKDLESEEALWDLYERWQSAHRVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGD-LRRDTPAKPPSVPG-FMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRA 225          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 1.954e-51
Identity = 100/193 (51.81%), Postives = 130/193 (67.36%), Query Frame = 1
Query:  130 FHEKELESEEGLWDLYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            +  ++LES + L +L+E W S+   +  +++EK  RF VFK N+ H+ +TNK  K Y L LN+FAD+++ EF   Y G K    R  +  R    F Y  V ++P SVDWRKKG+V  VK+QG CGSCWAFST+AAVEGIN I+T  L +LSEQEL+DCDT  N GCNGGLM+ AFE+I K GG+  E  YPY
Sbjct:   36 YSPEDLESHDKLIELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDE-ERSYAEFAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPY 227          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.655e-50
Identity = 97/190 (51.05%), Postives = 129/190 (67.89%), Query Frame = 1
Query:  139 KELESEEGLWDLYERWRSHHTVS-RSLDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            + L + + L +L+E W S H+ + +S++EK  RF VF++N+MH+ Q N     Y L LN+FAD+T+ EF   Y G  +   +  +  + +  F Y  +T +P SVDWRKKG+V  VKDQGQCGSCWAFST+AAVEGIN I T  L SLSEQEL+DCDT  N GCNGGLM+ AF++I   GG++ E  YPY
Sbjct:   39 EHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLG--LAKPQFSRKRQPSANFRYRDITDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGLHKEDDYPY 226          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.186e-48
Identity = 97/189 (51.32%), Postives = 127/189 (67.20%), Query Frame = 1
Query:  151 SEEGLWDLYERWRSHHTVSRS---LDEKHKRFNVFKQNVMHVHQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYGKV-TSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            SE  +  +YE W   H  ++S   L EK +RF +FK N+  V + N+ +  Y+L L +FAD+TN E+ S Y G+K++     +G R        +V   +P S+DWRKKG+V  VKDQG CGSCWAFSTI AVEGIN I+T  L++LSEQELVDCDT  N+GCNGGLM+ AFEFI K GG++T+  YPY
Sbjct:   42 SEAEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEK----KGERRTSLRYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPY 226          
BLAST of FC931112 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 6.506e-47
Identity = 96/188 (51.06%), Postives = 123/188 (65.43%), Query Frame = 1
Query:  172 LYERWRSHHTVSRS-----LDEKHKRFNVFKQNVMHV--HQTNKMDKPYKLKLNKFADMTNHEFASTYAGSKIKHHRMFQGTRGNGTFMYG---KVTSIPSSVDWRKKGSVTAVKDQGQCGSCWAFSTIAAVEGINHIMTNKLVSLSEQELVDCDTDQNQGCNGGLMELAFEFIKKKGGVNTEAKYPY 705
            +Y RW   H  S S     ++++ +RFN+FK N+  +  H  N  +  YKL L  FA++TN E+ S Y G++ +  R     + N    Y     V  +P +VDWR+KG+V A+KDQG CGSCWAFST AAVEGIN I+T +LVSLSEQELVDCD   NQGCNGGLM+ AF+FI K GG+NTE  YPY
Sbjct:    3 IYLRWSLEHGKSNSNSNGIINQQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAK-NVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPY 189          
The following BLAST results are available for this feature:
BLAST of FC931112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CYSEP_RICCO7.562e-9982.59Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CYSEP_VIGMU1.804e-9781.68Vignain OS=Vigna mungo PE=1 SV=1[more]
CYSEP_PHAVU3.184e-9479.21Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CYSP_HEMSP1.391e-7366.67Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CYSP2_HORVU1.397e-5757.44Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP1_HORVU1.397e-5757.44Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
XCP2_ARATH1.954e-5151.81Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
XCP1_ARATH1.655e-5051.05Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
RD21A_ARATH1.186e-4851.32Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CYSP4_BRANA6.506e-4751.06Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]

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Properties
Property NameValue
Genbank descriptionC34101E12EF PostHarvP1 Citrus clementina cDNA clone C34101E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931112 ID=FC931112; Name=FC931112; organism=Citrus clementina; type=EST; length=764bp
GATCTTGAGTTGAATCATACTCGTAAGTACCACTTGAAAAAGAAAAAAAA
AGGTTAAAAAATGAAGAGGGTTTATTTATTAGCTGCCTTTTTGCTAGCTT
TGGTTCTGGGAATCGTTGAGGGTTTCGATTTCCATGAGAAGGAGTTGGAA
TCCGAGGAAGGTCTGTGGGATTTATACGAGAGGTGGAGGAGTCATCATAC
GGTTTCAAGGAGTCTTGATGAGAAGCATAAGCGCTTCAATGTGTTCAAGC
AAAATGTTATGCATGTTCACCAAACTAACAAGATGGACAAGCCTTACAAG
TTGAAGCTGAACAAGTTTGCGGACATGACAAATCATGAATTTGCAAGCAC
ATACGCTGGATCAAAGATTAAGCATCACAGGATGTTCCAAGGGACGCGTG
GAAACGGGACCTTCATGTATGGGAAGGTAACGAGTATCCCATCATCAGTC
GATTGGAGGAAGAAAGGGTCTGTCACCGCTGTCAAGGATCAAGGCCAATG
CGGTAGCTGCTGGGCTTTTTCAACAATTGCAGCAGTAGAGGGCATTAATC
ACATTATGACAAATAAGCTCGTTTCTTTGTCTGAGCAAGAGTTAGTTGAT
TGTGACACTGATCAAAACCAAGGATGTAATGGAGGGCTAATGGAATTGGC
ATTTGAGTTCATCAAGAAAAAGGGTGGCGTAAACACAGAGGCTAAGTACC
CTTACCNAGCTATGATGGAACATGTGACGTTTTCAAGGAAGTTCCCCAGC
AGTGTCAATTGACG
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