FC931120

Overview
NameFC931120
Unique NameFC931120
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931120_ssr233 microsatellite FC931120_ssr233:233..250. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of FC931120 vs. ExPASy Swiss-Prot
Match: ZDH15_ARATH (Probable S-acyltransferase At4g00840 OS=Arabidopsis thaliana GN=At4g00840 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 6.525e-58
Identity = 110/189 (58.20%), Postives = 132/189 (69.84%), Query Frame = 3
Query:  126 IIILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYKSXXXXXXXXXXXXXMDTLVLLPSFIKFFGKAKNHSSSPANLAIVFLAFVINLAFALSLLCFIVMHSSLVSSNTTSI 692
            II +FH LL+ML+WSY   VF DPGSVPE++R          G +LEAGTS+          +G   S+G+C +C+N KPPRCHHCSVCQRCVLKMDHHCVW+VNCVGARNYK              +D +VLLPSFI+FF +A  HSSSP  LA + LAFV+N AF LSLLCF+VMH SL+SSNTTS+
Sbjct:   56 IIFVFHFLLIMLLWSYFTTVFTDPGSVPEHFRREMGG-----GDSLEAGTSTD---------QGAFGSLGYCTKCRNVKPPRCHHCSVCQRCVLKMDHHCVWIVNCVGARNYKFFLLFLFYTFLETMLDVIVLLPSFIEFFSQAIKHSSSPGKLASLVLAFVLNFAFVLSLLCFVVMHISLLSSNTTSV 230          

HSP 2 Score: 22.7126 bits (47), Expect = 6.525e-58
Identity = 13/32 (40.62%), Postives = 14/32 (43.75%), Query Frame = 2
Query:    2 LGYFMILLXXXXXXXXXXXXXXXTCGPQLLRG 97
            LGYFMILL               T  P L+RG
Sbjct:   13 LGYFMILLVVAVVGVSYYAVVVSTWWPILIRG 44          
BLAST of FC931120 vs. ExPASy Swiss-Prot
Match: ZDH14_ARATH (Probable S-acyltransferase At3g60800 OS=Arabidopsis thaliana GN=At3g60800 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 4.181e-47
Identity = 102/194 (52.58%), Postives = 120/194 (61.86%), Query Frame = 3
Query:  123 SIIILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSS--QSLDNVG--PDARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYKSXXXXXXXXXXXXXMDTLVLLPSFIKFFGKAKNHSSSPANLAIVFLAFVINLAFALSLLCFIVMHSSLVSSNTTSI 692
            +I+ILFH LL ML+WSY  VVF DPG VP NWR            + E G S    SLD VG   D+   +  V FC +C   KP RCHHCSVC RCVLKMDHHCVWVVNCVGA NYK              + TLVL+P FI FF   +    +P  LA  FLAFV+NLAFALS++ F++MH SLV+ NTT+I
Sbjct:   62 TILILFHFLLAMLLWSYFSVVFTDPGVVPPNWRP---------STDEERGESDPLNSLDFVGLQSDSSSSNPRVRFCRKCNQLKPSRCHHCSVCGRCVLKMDHHCVWVVNCVGALNYKYFLLFLFYTFLETTLVTLVLMPHFIAFFSD-EEIPGTPGTLATTFLAFVLNLAFALSVMGFLIMHISLVAGNTTTI 245          
BLAST of FC931120 vs. ExPASy Swiss-Prot
Match: ZDH18_ARATH (Probable S-acyltransferase At4g22750 OS=Arabidopsis thaliana GN=At4g22750 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 5.983e-43
Identity = 87/190 (45.79%), Postives = 112/190 (58.95%), Query Frame = 3
Query:  126 IIILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYKSXXXXXXXXXXXXXMDTLVLLPSFIKFFGKAKNH-SSSPANLAIVFLAFVINLAFALSLLCFIVMHSSLVSSNTTSI 692
            ++  FH LL+ML+WSY  VV  DPG VP  WR           +++E    +Q+L          S  V +C +C   KPPR HHCSVC RC+LKMDHHCVWVVNCVGA NYKS             +  + LLP F+ FF       + SP +LA  F+AFV+N+AFALS+L F++MH  LV+ NTT+I
Sbjct:   56 VLAFFHFLLIMLLWSYFSVVVTDPGGVPTGWRPE---------LDIEKSEGNQALIGEASVGDSSSHGVRYCRKCNQYKPPRSHHCSVCGRCILKMDHHCVWVVNCVGANNYKSFLLFLFYTFLETTVVAVSLLPIFLVFFSDGDGDITVSPGSLAASFVAFVLNIAFALSVLGFLIMHIMLVARNTTTI 236          

HSP 2 Score: 22.7126 bits (47), Expect = 5.983e-43
Identity = 15/41 (36.59%), Postives = 16/41 (39.02%), Query Frame = 2
Query:    2 LGYFMILLXXXXXXXXXXXXXXXTCGPQLLRGGVHSFFWVL 124
            LG  MIL+                 GP LL GGV S   VL
Sbjct:   15 LGSIMILIVIGIIGFTYYAVVVVNYGPALLIGGVDSLLSVL 55          
BLAST of FC931120 vs. ExPASy Swiss-Prot
Match: ZDH20_BOVIN (Probable palmitoyltransferase ZDHHC20 OS=Bos taurus GN=ZDHHC20 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.468e-23
Identity = 65/192 (33.85%), Postives = 86/192 (44.79%), Query Frame = 3
Query:  129 IILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPD----ARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYKSXXXXXXXXXXXXXMDTLVLLPSFIKFFGKAKNHSSSPANLAIVFLAFVINLAFALSLLCFIVMHSSLVSSNTTSI 692
            ++ FH+  VM VWSY M +F  P S P                        + L     D        S++V +C+RCQ  KP R HHCS C  C+LKMDHHC WV NCVG  NYK                   +L  FIKF+      + + A   ++FL FV  + F +S+L  +  H  LV  N T+I
Sbjct:   55 LVAFHLFFVMFVWSYWMTIFTSPAS-PSKEFCLSNSEKERYEKEFSQERQQEILRRAARDLPIYTTSASKTVRYCERCQLIKPDRAHHCSACDMCILKMDHHCPWVNNCVGFSNYKFFLLFLFYSLLYCLFVATTVLQYFIKFW--TNELTDTRAKFHVLFLFFVSTM-FFISVLSLLSYHCWLVGKNRTTI 242          
BLAST of FC931120 vs. ExPASy Swiss-Prot
Match: ZDH20_MOUSE (Probable palmitoyltransferase ZDHHC20 OS=Mus musculus GN=Zdhhc20 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.564e-22
Identity = 61/203 (30.05%), Postives = 88/203 (43.35%), Query Frame = 3
Query:  129 IILFHILLVMLVWSYVMVVFWDPGSVPENW---RXXXXXXXXXXGVNLEAGTSSQSLDNVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYKSXXXXXXXXXXXXXMDTLVLLPSFIKFFGKAKNHSSS------------PANLAIVFLAFVINLAFALSLLCFIVMHSSLVSSNTTSI 692
            ++ FH+  VM VWSY M +F  P S  + +                  +     ++  ++       S+++ +C++CQ  KP R HHCS C RCVLKMDHHC WV NCVG  NYK                   +L  FIKF+   +  S+             P+    V   F ++  F +S+L     H  LV  N T+I
Sbjct:   55 LVAFHLFFVMFVWSYWMTIFTSPASPSKEFYLSNSEKERYEKEFSQERQQDILRRAARDLPIYTTSASKAIRYCEKCQLIKPDRAHHCSACDRCVLKMDHHCPWVNNCVGFTNYKFFMLFLLYSLLYCLFVAATVLEYFIKFWTLCRRKSTENCPKNEPTVLNFPSAKFHVLFLFFVSAMFFVSVLSLFSYHCWLVGKNRTTI 257          
BLAST of FC931120 vs. ExPASy Swiss-Prot
Match: ZDH20_HUMAN (Probable palmitoyltransferase ZDHHC20 OS=Homo sapiens GN=ZDHHC20 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 7.940e-22
Identity = 62/196 (31.63%), Postives = 88/196 (44.90%), Query Frame = 3
Query:  129 IILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPDAR--------GPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYKSXXXXXXXXXXXXXMDTLVLLPSFIKFFGKAKNHSSSPANLAIVFLAFVINLAFALSLLCFIVMHSSLVSSNTTSI 692
            ++ FH+  VM VWSY M +F  P S  + +               E   S +    +   A           S+++ +C++CQ  KP R HHCS C  C+LKMDHHC WV NCVG  NYK                   +L  FIKF+      + + A   ++FL F ++  F +S+L     H  LV  N T+I
Sbjct:   55 LVAFHLFFVMFVWSYWMTIFTSPASPSKEFYLSNSEKE-----RYEKEFSQERQQEILRRAARALPIYTTSASKTIRYCEKCQLIKPDRAHHCSACDSCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVAATVLEYFIKFW--TNELTDTRAKFHVLFL-FFVSAMFFISVLSLFSYHCWLVGKNRTTI 242          
BLAST of FC931120 vs. ExPASy Swiss-Prot
Match: ZDHC2_HUMAN (Palmitoyltransferase ZDHHC2 OS=Homo sapiens GN=ZDHHC2 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.146e-21
Identity = 63/192 (32.81%), Postives = 86/192 (44.79%), Query Frame = 3
Query:  129 IILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPD----ARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYKSXXXXXXXXXXXXXMDTLVLLPSFIKFFGKAKNHSSSPANLAIVFLAFVINLAFALSLLCFIVMHSSLVSSNTTSI 692
            ++ +H+L  M VWSY   +F  P +  + +                     + L     D     R  S ++ +CDRCQ  KP RCHHCSVC +C+LKMDHHC WV NCVG  NYK                    L  FIKF+        + A   I+FL F   + F++SL      H  LVS N +++
Sbjct:   56 LMAYHLLFAMFVWSYWKTIFTLPMNPSKEFHLSYAEKDLLER-EPRGEAHQEVLRRAAKDLPIYTRTMSGAIRYCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLFIAATDLQYFIKFW--TNGLPDTQAKFHIMFLFFAAAM-FSVSLSSLFGYHCWLVSKNKSTL 243          
BLAST of FC931120 vs. ExPASy Swiss-Prot
Match: ZDHC2_MOUSE (Palmitoyltransferase ZDHHC2 OS=Mus musculus GN=Zdhhc2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.146e-20
Identity = 62/192 (32.29%), Postives = 86/192 (44.79%), Query Frame = 3
Query:  129 IILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPD----ARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYKSXXXXXXXXXXXXXMDTLVLLPSFIKFFGKAKNHSSSPANLAIVFLAFVINLAFALSLLCFIVMHSSLVSSNTTSI 692
            ++ +H+L  M VWSY   +F  P +  + +                     + L     D     R  S ++ +CDRCQ  KP RCHHCSVC +C+LKMDHHC WV NCVG  NYK                    L  FI+F+        + A   I+FL F   + F++SL      H  LVS N +++
Sbjct:   55 LMAYHLLFAMFVWSYWKTIFTLPMNPSKEFHLSYAEKELLER-EPRGEAHQEVLRRAAKDLPIYTRTMSGAIRYCDRCQLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLFIAATDLQYFIRFW--TNGLPDTQAKFHIMFLFFAAAM-FSVSLSSLFGYHCWLVSKNKSTL 242          
BLAST of FC931120 vs. ExPASy Swiss-Prot
Match: ZDHC2_RAT (Palmitoyltransferase ZDHHC2 OS=Rattus norvegicus GN=Zdhhc2 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.336e-20
Identity = 61/192 (31.77%), Postives = 86/192 (44.79%), Query Frame = 3
Query:  129 IILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLDNVGPD----ARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYKSXXXXXXXXXXXXXMDTLVLLPSFIKFFGKAKNHSSSPANLAIVFLAFVINLAFALSLLCFIVMHSSLVSSNTTSI 692
            ++ +H+L  M VWSY   +F  P +  + +                     + L     D     R  S ++ +CDRC+  KP RCHHCSVC +C+LKMDHHC WV NCVG  NYK                    L  FI+F+        + A   I+FL F   + F++SL      H  LVS N +++
Sbjct:   55 LMAYHLLFAMFVWSYWKTIFTLPMNPSKEFHLSYAEKELLER-EPRGEAHQEVLRRAAKDLPIYTRTMSGAIRYCDRCRLIKPDRCHHCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCLFIAATDLQYFIRFW--TNGLPDTQAKFHIMFLFFAAAM-FSVSLSSLFGYHCWLVSKNKSTL 242          
BLAST of FC931120 vs. ExPASy Swiss-Prot
Match: ZDH15_MOUSE (Palmitoyltransferase ZDHHC15 OS=Mus musculus GN=Zdhhc15 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.268e-19
Identity = 61/191 (31.94%), Postives = 83/191 (43.46%), Query Frame = 3
Query:  129 IILFHILLVMLVWSYVMVVFWDPGSVPENWRXXXXXXXXXXGVNLEAGTSSQSLD---NVGPDARGPSRSVGFCDRCQNGKPPRCHHCSVCQRCVLKMDHHCVWVVNCVGARNYKSXXXXXXXXXXXXXMDTLVLLPSFIKFFGKAKNHSSSPANLAIVFLAFVINLAFALSLLCFIVMHSSLVSSNTTSI 692
            +IL+H + V   W+Y   +F  P    + +                       +D    +    R  S +V FCDRC   KP RCHHCSVC  CVLKMDHHC WV NC+G  NYK                   +   FIK++       S  +   ++FL FV  + F +SL+     H  LVS N T++
Sbjct:   58 LILYHAIFVFFAWTYWKSIFTLPQQPNQKFHLSYTDKERYKNEERPEVQKQMLVDMAKKLPVYTRTGSGAVRFCDRCHLIKPDRCHHCSVCAMCVLKMDHHCPWVNNCIGFSNYKFFLQFLAYSVLYCLYIATTVFSYFIKYW--RGELPSVRSKFHVLFLLFVACM-FFVSLVILFGYHCWLVSRNKTTL 245          
The following BLAST results are available for this feature:
BLAST of FC931120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
ZDH15_ARATH6.525e-5858.20Probable S-acyltransferase At4g00840 OS=Arabidopsi... [more]
ZDH14_ARATH4.181e-4752.58Probable S-acyltransferase At3g60800 OS=Arabidopsi... [more]
ZDH18_ARATH5.983e-4345.79Probable S-acyltransferase At4g22750 OS=Arabidopsi... [more]
ZDH20_BOVIN2.468e-2333.85Probable palmitoyltransferase ZDHHC20 OS=Bos tauru... [more]
ZDH20_MOUSE3.564e-2230.05Probable palmitoyltransferase ZDHHC20 OS=Mus muscu... [more]
ZDH20_HUMAN7.940e-2231.63Probable palmitoyltransferase ZDHHC20 OS=Homo sapi... [more]
ZDHC2_HUMAN5.146e-2132.81Palmitoyltransferase ZDHHC2 OS=Homo sapiens GN=ZDH... [more]
ZDHC2_MOUSE1.146e-2032.29Palmitoyltransferase ZDHHC2 OS=Mus musculus GN=Zdh... [more]
ZDHC2_RAT3.336e-2031.77Palmitoyltransferase ZDHHC2 OS=Rattus norvegicus G... [more]
ZDH15_MOUSE1.268e-1931.94Palmitoyltransferase ZDHHC15 OS=Mus musculus GN=Zd... [more]

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Properties
Property NameValue
Genbank descriptionC34101F09EF PostHarvP1 Citrus clementina cDNA clone C34101F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931120 ID=FC931120; Name=FC931120; organism=Citrus clementina; type=EST; length=692bp
GCTGGGCTACTTCATGATCCTGCTAGTGGCCGCAATTATCGCTGTGTCGT
ACTACGCCGTCGTTGTAATTACCTGTGGCCCACAGTTGCTTCGCGGCGGA
GTCCACTCTTTTTTTTGGGTTCTCAATAATTATTCTATTCCATATTCTGC
TTGTAATGTTGGTATGGAGCTATGTTATGGTAGTGTTTTGGGACCCTGGT
TCTGTGCCTGAAAATTGGAGGTCAGTTTCAGTATCATCATCATCATCATC
GGGGGTGAATTTAGAGGCTGGTACTTCTTCTCAATCATTAGATAACGTGG
GACCGGATGCACGGGGTCCTTCACGGTCGGTAGGCTTCTGTGATCGATGC
CAAAATGGGAAGCCTCCCCGTTGCCATCATTGTTCTGTTTGTCAAAGATG
TGTTCTTAAGATGGATCACCACTGTGTTTGGGTGGTGAATTGTGTTGGAG
CGCGCAACTACAAGTCTTTTCTTCTTTTCTTACTGTATACATTTCTGGAG
ACAACAATGGATACTCTGGTGTTGCTGCCTAGTTTTATCAAGTTCTTTGG
CAAAGCAAAGAACCATTCTTCCTCTCCTGCCAATCTAGCTATCGTTTTTC
TAGCTTTTGTTATTAATTTGGCTTTTGCTTTGAGTCTTCTTTGTTTCATT
GTCATGCATTCGTCGCTTGTATCAAGCAACACGACATCAATC
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