FC931121

Overview
NameFC931121
Unique NameFC931121
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length657
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13855 contig Ccv1_Contig13855:163..819. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931121 vs. ExPASy Swiss-Prot
Match: DAG_ANTMA (DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.513e-31
Identity = 69/142 (48.59%), Postives = 87/142 (61.27%), Query Frame = 3
Query:  231 PLPSTRFCQIRCRANRSGNSAYSPLNSGSNFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIKTLAQVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPENKDYGAELFVN 656
            P+ S        RA   G  +    N+ +N  +   T M    PGCDY HWLIVM+ P     T++QMID Y+ TLA V+GS EEAKK +Y  S   Y GF C + EETS K +GLPGVL+VLPDSY+D +NKDYG + +VN
Sbjct:   42 PIKSRSAAYPTVRALTDGEYSSRRNNNNNNSGEERETIM---LPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVN 180          
BLAST of FC931121 vs. ExPASy Swiss-Prot
Match: UMP1_ARATH (Uncharacterized protein At3g15000, mitochondrial OS=Arabidopsis thaliana GN=At3g15000 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.577e-29
Identity = 66/127 (51.97%), Postives = 90/127 (70.87%), Query Frame = 3
Query:  279 SGNSAYSPLNSGS-NFSDRPPTEMAPLFPGCDYEHWLIVMDKPGGEGATKQQMIDCYIKTLAQVVGSEEEAKKKIYNVSCERYFGFGCELDEETSNKLEGLPGVLFVLPDSYVDPENKDYGAELFVN 656
            S  +  S LN  + N+S+RPP E   L  GCD+EHWL+V++ P GE  T+ ++ID YIKTLAQ+VGSE+EA+ KIY+VS   Y+ FG  + E+ S+KL+ L  V +VLPDSY+D  NKDYG E F++
Sbjct:   66 STQATSSSLNDPNPNWSNRPPKETI-LLDGCDFEHWLVVVEPPQGE-PTRDEIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFID 190          
The following BLAST results are available for this feature:
BLAST of FC931121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
DAG_ANTMA8.513e-3148.59DAG protein, chloroplastic OS=Antirrhinum majus GN... [more]
UMP1_ARATH3.577e-2951.97Uncharacterized protein At3g15000, mitochondrial O... [more]
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Properties
Property NameValue
Genbank descriptionC34101F10EF PostHarvP1 Citrus clementina cDNA clone C34101F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931121 ID=FC931121; Name=FC931121; organism=Citrus clementina; type=EST; length=657bp
GATCTTCTTCTTCGATCTCCCATAAATCCTCGTCAGAAAAAACAATGGCT
CAAACCCTAACACGGGCCACTACGGCTCTCTCCATCCGCAGCTCAAGACT
GTCCCTCTTCAGCTCAAAGCGCCTGCTTTCCACAAACACCACTACCGTCA
CCGCCCCATCTCCGCTCCCCTCTCTGCTCTTCAGCCGTCGGGCCGCAGCC
CCGCTCTCCCATGCGGTGGGGTTGATTTCCCCCCTACCATCCACTCGCTT
CTGCCAAATACGGTGCCGTGCCAACCGCTCTGGAAACTCAGCCTACTCCC
CGCTCAACTCCGGGTCCAACTTCAGCGACCGCCCTCCCACCGAGATGGCC
CCGCTATTCCCCGGCTGTGACTACGAGCACTGGCTTATCGTCATGGACAA
GCCCGGCGGCGAGGGCGCCACTAAACAGCAGATGATTGATTGTTATATCA
AAACCCTTGCTCAGGTGGTCGGCAGTGAGGAAGAGGCAAAGAAGAAAATT
TACAATGTTTCGTGTGAGAGGTATTTTGGATTCGGCTGTGAGCTTGATGA
GGAGACCTCTAATAAGCTAGAAGGCTTGCCGGGTGTTTTGTTTGTGCTTC
CAGATTCATATGTTGATCCTGAAAACAAAGACTATGGTGCTGAGTTGTTT
GTGAATG
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