FC931130

Overview
NameFC931130
Unique NameFC931130
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHIA_TOBAC (Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 6.190e-75
Identity = 128/191 (67.02%), Postives = 145/191 (75.92%), Query Frame = 1
Query:  118 AGVISVYWGQNGNEGSLADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNNGCAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFNPPCQYS 690
            AG I +YWGQNGNEGSLAD C++ NY IVNIAFL  FGNGQ P +NLAGHCDP    C GLSN+I+ CQ QGIKV                   R VA +LW+++LGGQS++RPLGDAVLDGIDFDIEGG+ Q+WDELA+ LS FSQQ+KVYL AAPQCP+PD WL GAL TGLFDYVWVQF  NPPCQYS
Sbjct:   22 AGDIVIYWGQNGNEGSLADTCATNNYAIVNIAFLVVFGNGQNPVLNLAGHCDPNAGACTGLSNDIRACQNQGIKVMLSLGGGAGSYFLSSADDARNVANYLWNNYLGGQSNTRPLGDAVLDGIDFDIEGGTTQHWDELAKTLSQFSQQRKVYLTAAPQCPFPDTWLNGALSTGLFDYVWVQFYNNPPCQYS 212          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHLY_HEVBR (Hevamine-A OS=Hevea brasiliensis PE=1 SV=2)

HSP 1 Score: 256.914 bits (655), Expect = 7.329e-68
Identity = 123/196 (62.76%), Postives = 144/196 (73.47%), Query Frame = 1
Query:  106 TYTSAGVISVYWGQNGNEGSLADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNNGCAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ-KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFNPPCQYS 690
            ++   G I++YWGQNGNEG+L   CS+  Y  VNIAFL+ FGNGQTPQINLAGHC+P   GC  +SN I++CQ QGIKV                   + VA +LW++FLGG+SSSRPLGDAVLDGIDFDIE GS  YWD+LAR LS +S+Q KKVYL AAPQCP+PD +LG AL TGLFDYVWVQF  NPPCQYS
Sbjct:   22 SHVDGGGIAIYWGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIVSNGIRSCQIQGIKVMLSLGGGIGSYTLASQADAKNVADYLWNNFLGGKSSSRPLGDAVLDGIDFDIEHGSTLYWDDLARYLSAYSKQGKKVYLTAAPQCPFPDRYLGTALNTGLFDYVWVQFYNNPPCQYS 217          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHIA_CICAR (Acidic endochitinase OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 4.750e-67
Identity = 125/193 (64.77%), Postives = 144/193 (74.61%), Query Frame = 1
Query:  112 TSAGVISVYWGQNGNEGSLADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNNGCAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFNPPCQYS 690
            ++A  I+VYWGQNGNEGSL DAC++ NY  VNIAFLSTFGNGQ PQINLAGHCDP+ NGC   S EI+ CQ +GIKV                     +A +LW++FLGG S+SRPLGDAVLDGIDFDIE G  Q++DELA+AL+ FSQQ KVYL+AAPQCPYPDA L  A+ TGLFDYVWVQF  NP CQYS
Sbjct:   21 SNAAGIAVYWGQNGNEGSLQDACNTNNYQFVNIAFLSTFGNGQNPQINLAGHCDPSTNGCTKFSPEIQACQAKGIKVLLSLGGGAGSYSLNSAEEATTLANYLWNNFLGGTSTSRPLGDAVLDGIDFDIESG-GQHYDELAKALNGFSQQ-KVYLSAAPQCPYPDAHLDSAIQTGLFDYVWVQFYNNPQCQYS 211          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHIT3_VITVI (Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 5.252e-66
Identity = 120/195 (61.54%), Postives = 140/195 (71.79%), Query Frame = 1
Query:  118 AGVISVYWGQNGNEGSLADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNNGCAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ----KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFNPPCQYS 690
            AG I++YWGQNGNEG+L   C++G Y  VNIAFL+ FGNGQTP+INLAGHC+P +NGC  +S  I+ CQ +GIKV                   + VA +LW++FLGGQSSSRPLGDAVLDGIDFDIE GS  +WD+LARALS    Q    +KVYL AAPQCP+PD   G AL TGLFDYVWVQF  NPPCQYS
Sbjct:   25 AGGIAIYWGQNGNEGTLTQTCNTGKYSYVNIAFLNKFGNGQTPEINLAGHCNPASNGCTSVSTGIRNCQNRGIKVMLSIGGGAGSYSLSSSNDAQNVANYLWNNFLGGQSSSRPLGDAVLDGIDFDIELGSTLHWDDLARALSRIEFQQERGRKVYLTAAPQCPFPDKVPGTALNTGLFDYVWVQFYNNPPCQYS 219          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHIA_PHAAN (Acidic endochitinase OS=Phaseolus angularis PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.446e-65
Identity = 119/191 (62.30%), Postives = 140/191 (73.30%), Query Frame = 1
Query:  118 AGVISVYWGQNGNEGSLADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNNGCAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFNPPCQYS 690
            AG ISVYWGQNGNEGSLADAC++GNY  VNIAFL TFG GQTPQ+NLAGHC+P+ N C   S++IK CQ + IKV                    QVA ++W++FLGGQSSSRPLGDA+LDG+DFDIE G+ ++WD+LARAL  F+ Q  + L AAPQCP PDA L  A+ TGLFD VWVQF  NPPCQYS
Sbjct:   29 AGGISVYWGQNGNEGSLADACNTGNYKYVNIAFLFTFGGGQTPQLNLAGHCNPSINNCNVFSDQIKECQSKDIKVLLSLGGASGSYSLTSADDATQVANYIWNNFLGGQSSSRPLGDAILDGVDFDIESGTGEHWDDLARALKGFNSQ--LLLTAAPQCPIPDAHLDTAIKTGLFDIVWVQFYNNPPCQYS 217          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHIE_BETVU (Acidic endochitinase SE2 OS=Beta vulgaris GN=SE2 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.385e-64
Identity = 117/188 (62.23%), Postives = 137/188 (72.87%), Query Frame = 1
Query:  127 ISVYWGQNGNEGSLADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNNGCAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQ-QKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFNPPCQY 687
            I +YWGQNG+EGSLAD C+SGNYG V +AF++TFGNGQTP +NLAGHCDP  N C  LS++IKTCQ  GIKV                      A +LW+ +LGGQSS+RPLGDAVLDGIDFDIE G  ++WD+LARAL+  +  QK VYL+AAPQCP PDA L  A+ TGLFDYVWVQF  NPPCQY
Sbjct:   28 IVIYWGQNGDEGSLADTCNSGNYGTVILAFVATFGNGQTPALNLAGHCDPATN-CNSLSSDIKTCQQAGIKVLLSIGGGAGGYSLSSTDDANTFADYLWNTYLGGQSSTRPLGDAVLDGIDFDIESGDGRFWDDLARALAGHNNGQKTVYLSAAPQCPLPDASLSTAIATGLFDYVWVQFYNNPPCQY 214          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHIA_CUCSA (Acidic endochitinase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.065e-62
Identity = 113/193 (58.55%), Postives = 137/193 (70.98%), Query Frame = 1
Query:  112 TSAGVISVYWGQNGNEGSLADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNNGCAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFNPPCQYS 690
            + A  I++YWGQNGNEGSLA  C++GNY  VNIAFLS+FG+GQ P +NLAGHC+P NNGCA LS+EI +C+ Q +KV                   +QVA F+W+ +LGGQS SRPLG AVLDG+DFDIE GS Q+WD LA+ L NF Q   V L+AAPQCP PDA L  A+ TGLFD VWVQF  NPPC ++
Sbjct:   23 SDAAGIAIYWGQNGNEGSLASTCATGNYEFVNIAFLSSFGSGQAPVLNLAGHCNPDNNGCAFLSDEINSCKSQNVKVLLSIGGGAGSYSLSSADDAKQVANFIWNSYLGGQSDSRPLGAAVLDGVDFDIESGSGQFWDVLAQELKNFGQ---VILSAAPQCPIPDAHLDAAIKTGLFDSVWVQFYNNPPCMFA 212          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHIA_ARATH (Acidic endochitinase OS=Arabidopsis thaliana GN=CHIB1 PE=2 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 6.009e-62
Identity = 108/193 (55.96%), Postives = 137/193 (70.98%), Query Frame = 1
Query:  115 SAGVISVYWGQNGNEGSLADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNNGCAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ-KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFNPPCQYS 690
            S G I++YWGQNGNEG+L+  C++G Y  VN+AFL  FGNGQTP++NLAGHC+P  N C    +++K CQ +GIKV                   + +A +LW++FLGG+SSSRPLGDAVLDGIDF+IE GS Q+WD+LAR LS FS + +K+YL  APQCP+PD  +G AL T  FDYVW+QF  NPPC YS
Sbjct:   28 SRGGIAIYWGQNGNEGNLSATCATGRYAYVNVAFLVKFGNGQTPELNLAGHCNPAANTCTHFGSQVKDCQSRGIKVMLSLGGGIGNYSIGSREDAKVIADYLWNNFLGGKSSSRPLGDAVLDGIDFNIELGSPQHWDDLARTLSKFSHRGRKIYLTGAPQCPFPDRLMGSALNTKRFDYVWIQFYNNPPCSYS 220          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHIB_TOBAC (Basic endochitinase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.264e-58
Identity = 114/191 (59.69%), Postives = 132/191 (69.11%), Query Frame = 1
Query:  118 AGVISVYWGQNGNEGSLADACSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNNGCAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ-KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFNPPCQY 687
            AG I VYWGQ+  EG L D C+SG Y IVNIAFLS+FGN QTP++NLAGHC+P++ GC  L+  I+ CQ  GIK+                   RQVA +LW++FLGGQSS RPLGDAVLDGIDFDIE G   Y   LAR LS   QQ KK+YL AAPQCP+PD  L GAL TGLFDYVWVQF  NP C++
Sbjct:   24 AGDIVVYWGQDVGEGKLIDTCNSGLYNIVNIAFLSSFGNFQTPKLNLAGHCEPSSGGCQQLTKSIRHCQSIGIKIMLSIGGGTPTYTLSSVDDARQVADYLWNNFLGGQSSFRPLGDAVLDGIDFDIELGQPHYI-ALARRLSEHGQQGKKLYLTAAPQCPFPDKLLNGALQTGLFDYVWVQFYNNPECEF 213          
BLAST of FC931130 vs. ExPASy Swiss-Prot
Match: CHI1_RHIOL (Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.765e-29
Identity = 77/194 (39.69%), Postives = 98/194 (50.52%), Query Frame = 1
Query:  127 ISVYWGQNGNEGSLADA-----CSSGNYGIVNIAFLSTFGNGQTPQINLAGHCDPTNN------GCAGLSNEIKTCQGQGIKVXXXXXXXXXXXXXXXXXXXRQVAQFLWDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARAL-SNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFXFN 672
            +  YWGQN   GS   A     C SG    V ++FL  F  G TP+INL+  C  T         C  +  +IK CQ +G+KV                   +Q AQ +W+ F GG S +RP GDAV+DG+D DIEGG++  +     AL   FS      + AAPQCP+PDA LG  L +  FDYV VQF  N
Sbjct:   31 VMYYWGQNSAGGSNTQASLGTYCESGQVDAVLLSFLHVFNVGGTPEINLSSACAGTYFPNTQLLSCPAVGADIKKCQDKGVKVILSLGGAAGVYGFTSDAQGQQFAQTIWNLFGGGSSDTRPFGDAVIDGVDLDIEGGASTGYAAFVNALRQKFS--SNFLIGAAPQCPFPDAILGSVLNSASFDYVNVQFYNN 222          
The following BLAST results are available for this feature:
BLAST of FC931130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
CHIA_TOBAC6.190e-7567.02Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=... [more]
CHLY_HEVBR7.329e-6862.76Hevamine-A OS=Hevea brasiliensis PE=1 SV=2[more]
CHIA_CICAR4.750e-6764.77Acidic endochitinase OS=Cicer arietinum PE=2 SV=1[more]
CHIT3_VITVI5.252e-6661.54Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE... [more]
CHIA_PHAAN4.446e-6562.30Acidic endochitinase OS=Phaseolus angularis PE=2 S... [more]
CHIE_BETVU8.385e-6462.23Acidic endochitinase SE2 OS=Beta vulgaris GN=SE2 P... [more]
CHIA_CUCSA2.065e-6258.55Acidic endochitinase OS=Cucumis sativus PE=1 SV=1[more]
CHIA_ARATH6.009e-6255.96Acidic endochitinase OS=Arabidopsis thaliana GN=CH... [more]
CHIB_TOBAC5.264e-5859.69Basic endochitinase OS=Nicotiana tabacum PE=2 SV=1[more]
CHI1_RHIOL1.765e-2939.69Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionC34101G09EF PostHarvP1 Citrus clementina cDNA clone C34101G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931130 ID=FC931130; Name=FC931130; organism=Citrus clementina; type=EST; length=690bp
GAACGAATGTTAAGCCAAGCACTATTAAGCCATAAGCACACGATGGCGCA
TCAGTTTACTCTCGGAAAATTCCTGTTCTGCCTGTTGCAGCTGGCTGCCC
TGTTCACTTACACCAGTGCTGGTGTGATCTCAGTGTACTGGGGTCAGAAC
GGAAATGAAGGAAGTTTGGCAGATGCTTGTTCGTCCGGCAATTATGGAAT
TGTGAACATCGCTTTCCTATCCACATTTGGCAATGGCCAGACTCCGCAAA
TCAACCTAGCTGGCCACTGCGACCCGACCAATAATGGTTGCGCCGGGTTG
AGCAATGAAATAAAAACTTGCCAGGGCCAAGGCATCAAGGTCTTGCTCTC
CATTGGAGGTGCTTCCGGAAGCTATTCCCTTTCCTCTGCTGATGACGCCA
GGCAAGTCGCACAATTCTTGTGGGACCATTTTCTTGGAGGCCAATCAAGC
TCCCGGCCATTAGGTGATGCAGTTTTAGATGGAATCGATTTCGATATTGA
GGGAGGCTCAAACCAATACTGGGACGAACTAGCCAGGGCCTTGTCAAATT
TTAGCCAACAGAAGAAGGTTTACTTAGCAGCAGCTCCACAATGTCCGTAC
CCTGATGCATGGCTTGGCGGTGCACTAGGAACTGGCTTATTTGATTACGT
TTGGGTCCAATTCTANTTCAATCCTCCTTGTCAGTATTCC
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