FC931155

Overview
NameFC931155
Unique NameFC931155
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length678
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15283 contig Ccv1_Contig15283:1..678. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL15_ARATH (Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsis thaliana GN=COL15 PE=2 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.388e-47
Identity = 85/120 (70.83%), Postives = 99/120 (82.50%), Query Frame = 1
Query:  262 NKESVPCDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGFSGCPSALELASMWNFDL-QGEKLNE 618
            + E VPCDFC ++ AVL+CRAD+AKLCL CD  VH+ANLLS+KH+RSQICDNC +EPV+ RC TDNL+LCQECDWD HGSCSVS AH R  +EGFSGCPSALELA++W  DL QG K  E
Sbjct:    3 SSERVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGFSGCPSALELAALWGLDLEQGRKDEE 122          
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL14_ARATH (Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsis thaliana GN=COL14 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.388e-47
Identity = 84/125 (67.20%), Postives = 100/125 (80.00%), Query Frame = 1
Query:  274 VPCDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGFSGCPSALELASMWNFDLQGEKLNE-----TASFG 633
            V C+FC ++ AVL+CRAD+AKLCL CD HVHSANLLS+KH+RSQICDNC  EPV+ RC TDNLVLCQECDWD HGSCS SA H+R  +EGFSGCPS LELA++W  DL+G+K  +     T +FG
Sbjct:   10 VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGFSGCPSVLELAAVWGIDLKGKKKEDDEDELTKNFG 134          
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL9_ARATH (Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis thaliana GN=COL9 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.461e-28
Identity = 57/124 (45.97%), Postives = 78/124 (62.90%), Query Frame = 1
Query:  280 CDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAH---------GSCSVSAAHDRVPIEGFSGCPSALELASMWNF--DLQGEKLNE 618
            CDFC +Q +++YCR+D+A LCL CD  VHSAN LSK+H R+ +C+ C ++P T RC  + + LCQ CDW  H          S +    H R  I  +SGCPS+ ELAS+W+F  DL G+ + E
Sbjct:    5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRCVEERVSLCQNCDWSGHNNSNNNNSSSSSTSPQQHKRQTISCYSGCPSSSELASIWSFCLDLAGQSICE 128          
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL10_ARATH (Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsis thaliana GN=COL10 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.214e-28
Identity = 54/119 (45.38%), Postives = 81/119 (68.07%), Query Frame = 1
Query:  280 CDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHG--SCSVSAAHDRVPIEGFSGCPSALELASMWNF--DLQGEKLNETA 624
            CDFC +Q +++YCR+D+A LCL CD +VHSAN LSK+H R+ +C+ C ++P + RC+ + + LCQ CDW  H   + + ++ H R  I  +SGCPS+ EL+S+W+F  DL      E+A
Sbjct:    5 CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSAELSSIWSFCMDLNISSAEESA 123          
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL13_ARATH (Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsis thaliana GN=COL13 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.062e-27
Identity = 53/105 (50.48%), Postives = 67/105 (63.81%), Query Frame = 1
Query:  280 CDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGFSGCPSALELASMWNFD 594
            CD+C   +A++YC+ADSAKLCL CD  VH AN L  KH RS +CD+C   P +  C T+  VLCQ CDW  H   + S+ H R P EGF+GCPS  EL ++   D
Sbjct:   13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPSSLFCETERSVLCQNCDWQHH--TASSSLHSRRPFEGFTGCPSVPELLAIVGLD 115          
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL12_ARATH (Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsis thaliana GN=COL12 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.635e-22
Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 1
Query:  280 CDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGFSGCPSALELASMWNFDLQ 600
            CD C+   A++YC++D AKLCL CD HVHSAN LS +HIRS IC+ C S+P   RC  + +  CQ C W  H S      H    +  FSGCPS  +   MW+  L+
Sbjct:    5 CDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQPAAIRCLDEKVSYCQGCHW--HESNCSELGHRVQSLNPFSGCPSPTDFNRMWSSILE 109          
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL11_ARATH (Putative zinc finger protein CONSTANS-LIKE 11 OS=Arabidopsis thaliana GN=COL11 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 7.668e-22
Identity = 46/119 (38.66%), Postives = 68/119 (57.14%), Query Frame = 1
Query:  280 CDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGFSGCPSALELASMWNFDLQGEKLNETASFGE 636
            CDFC  + A++YC++DSAKLCL CD +VHSAN LS++H RS +C+ C  +P    C  +N+ LCQ C W A  S      H    +  +S CPS  +   +W+  L+    +  + F +
Sbjct:    5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHCMNENVSLCQGCQWTA--SNCTGLGHRLQSLNPYSDCPSPSDFGKIWSSTLEPSVTSLVSPFSD 121          
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COLX_ARATH (Putative zinc finger protein At1g68190 OS=Arabidopsis thaliana GN=At1g68190 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.231e-21
Identity = 49/110 (44.55%), Postives = 67/110 (60.91%), Query Frame = 1
Query:  262 NKESVPCDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGFSGCPSALELASMWNF 591
            N E V C+FC    AV+YC AD+A LCL CD  VHSAN LS +H+R+ +CD+C+++P   RC    + LC  C+   HG    S+ H R  +  ++GCP A + A MW F
Sbjct:    9 NMERV-CEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQPCVVRCFDHKMFLCHGCNDKFHG--GGSSEHRRRDLRCYTGCPPAKDFAVMWGF 115          
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana GN=CO PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 9.374e-20
Identity = 43/109 (39.45%), Postives = 59/109 (54.13%), Query Frame = 1
Query:  226 LKMDMVSPQSDRNKESVPCDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGFSG 552
            LK +     S  N  + PCD C      +YC ADSA LC+ CD  VHSAN ++ +H R ++C++C   P  F C  D+  LC  CD + H +  ++  H RVPI   SG
Sbjct:    2 LKQESNDIGSGENNRARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISG 110          
BLAST of FC931155 vs. ExPASy Swiss-Prot
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana GN=COL4 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 7.427e-17
Identity = 38/89 (42.70%), Postives = 49/89 (55.06%), Query Frame = 1
Query:  280 CDFCSDQIAVLYCRADSAKLCLFCDHHVHSANLLSKKHIRSQICDNCRSEPVTFRCATDNLVLCQECDWDAHGSCSVSAAHDRVPIEGF 546
            CD C    A LYCR D+A LCL CD  VH+AN L+ +H R  +C+ C   P    C  D   LC  CD D H +  ++  H+RVP+  F
Sbjct:    6 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERVPVTPF 94          
The following BLAST results are available for this feature:
BLAST of FC931155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
COL15_ARATH1.388e-4770.83Zinc finger protein CONSTANS-LIKE 15 OS=Arabidopsi... [more]
COL14_ARATH1.388e-4767.20Zinc finger protein CONSTANS-LIKE 14 OS=Arabidopsi... [more]
COL9_ARATH2.461e-2845.97Zinc finger protein CONSTANS-LIKE 9 OS=Arabidopsis... [more]
COL10_ARATH3.214e-2845.38Zinc finger protein CONSTANS-LIKE 10 OS=Arabidopsi... [more]
COL13_ARATH6.062e-2750.48Zinc finger protein CONSTANS-LIKE 13 OS=Arabidopsi... [more]
COL12_ARATH2.635e-2245.79Zinc finger protein CONSTANS-LIKE 12 OS=Arabidopsi... [more]
COL11_ARATH7.668e-2238.66Putative zinc finger protein CONSTANS-LIKE 11 OS=A... [more]
COLX_ARATH2.231e-2144.55Putative zinc finger protein At1g68190 OS=Arabidop... [more]
CONS_ARATH9.374e-2039.45Zinc finger protein CONSTANS OS=Arabidopsis thalia... [more]
COL4_ARATH7.427e-1742.70Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC34102A11EF PostHarvP1 Citrus clementina cDNA clone C34102A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931155 ID=FC931155; Name=FC931155; organism=Citrus clementina; type=EST; length=678bp
GAGCGAGCAAGTTAACCCACCATCTTTGCTCATCAGCCAGCCTCGGTTTC
TACAAAAACAGAAATAACATTAATCCCCAAAAGGTCAAAAATGTTTCTTC
TCCTTGTTTCCAGAAATTGAAGAAAATTACCAAAACACACTCTCTTATCT
TCCTCCCCTTGCGATCAGTTAGGGTTTTGAAAACAAAAACACAAAATAAA
AAAGAAACTTTATTGAATATTTTGCTTGAAAATGGACATGGTGAGTCCGC
AATCCGACAGGAACAAAGAAAGCGTGCCGTGCGATTTCTGCAGTGACCAA
ATAGCGGTTCTTTACTGTAGAGCTGACTCAGCGAAGCTCTGTTTGTTCTG
CGACCACCACGTGCACTCGGCGAACCTACTTTCAAAGAAACACATCCGGT
CACAGATCTGCGATAACTGCCGCAGCGAACCAGTGACGTTCCGGTGCGCC
ACTGACAATTTGGTGCTCTGTCAAGAGTGCGATTGGGACGCGCACGGTAG
CTGCTCTGTGTCTGCCGCGCACGATCGCGTCCCAATCGAAGGCTTCTCCG
GTTGTCCATCGGCTCTCGAGCTGGCGTCCATGTGGAATTTCGATCTTCAG
GGTGAGAAACTGAACGAAACGGCGTCCTTTGGTGAGTACTGGTACGGGAG
TCAAGATTTCGAATCCTTGAGGATGTAT
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