FC931177

Overview
NameFC931177
Unique NameFC931177
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15123 contig Ccv1_Contig15123:8..686. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931177 vs. ExPASy Swiss-Prot
Match: P5CR_SOYBN (Pyrroline-5-carboxylate reductase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.967e-74
Identity = 141/208 (67.79%), Postives = 164/208 (78.85%), Query Frame = 1
Query:   52 MDAFPIPAESFILGFIGAGKMAESIAKGMAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELAL 675
            M+ FPIPAES+ LGFIGAGKMAESIA+G  +SGVLPP RI TAVH NL RR AFES GV VL  N+                       ++ PLL++ KLLVSVAAG KLKDLQEW G+ RFIRVMPNTP+AVG+AA+VMSLGG+ATEEDG +I +LFGS+GKIW+A+EK FDAITGLSGSGPAY++LAIEALADGGVAAGLPR+L+L
Sbjct:    1 MEIFPIPAESYTLGFIGAGKMAESIARGAVRSGVLPPSRIRTAVHFNLARRGAFESFGVTVLPSNDDVVRESDVVVLSVKPQLVKDVVSKLTPLLTKHKLLVSVAAGTKLKDLQEWAGNDRFIRVMPNTPAAVGQAASVMSLGGSATEEDGNIIAQLFGSIGKIWKAEEKYFDAITGLSGSGPAYVYLAIEALADGGVAAGLPRDLSL 208          
BLAST of FC931177 vs. ExPASy Swiss-Prot
Match: P5CR_ACTCH (Pyrroline-5-carboxylate reductase OS=Actinidia chinensis PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.472e-73
Identity = 143/205 (69.76%), Postives = 163/205 (79.51%), Query Frame = 1
Query:   64 PIPAESFILGFIGAGKMAESIAKGMAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALG 678
            PIP +++ LGFIGAGKMAESIA+G+ KSGVLP  RI TA H    RR+AFES GVKVL  N+                      +Q+RPLLS K+LLVS+ AGVKLK+L++W GHSRFIRVMPNTP+AVGEAA+VMSLG TAT EDGELI KLFG++GKIW+ADEKLFDA+TGLSGSGPAYIFLAIEALADGGVAAGLPRELALG
Sbjct:    8 PIPTDTYKLGFIGAGKMAESIARGVVKSGVLPASRIRTA-HLGSARREAFESFGVKVLDRNDQVVEDSDVIIFSVKPQIVKEVVLQLRPLLSEKQLLVSIVAGVKLKELEDWAGHSRFIRVMPNTPAAVGEAASVMSLGATATGEDGELITKLFGAIGKIWKADEKLFDAVTGLSGSGPAYIFLAIEALADGGVAAGLPRELALG 211          
BLAST of FC931177 vs. ExPASy Swiss-Prot
Match: P5CR1_ARATH (Pyrroline-5-carboxylate reductase OS=Arabidopsis thaliana GN=PROC1 PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 5.595e-73
Identity = 140/208 (67.31%), Postives = 161/208 (77.40%), Query Frame = 1
Query:   52 MDAFPIPAESFILGFIGAGKMAESIAKGMAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELAL 675
            M+  PIPAESF +GFIGAGKMAESIA+G+  SGVLPP+RICTAVHSNL RRD FES GV V S +                        +++  LS+ K+LVSVAAG+KL DLQEW+G  RFIRVMPNTP+AVGEAA+VMSLG  ATEEDG ++  LFG+VGKI +ADEK+FDA+TGLSGSGPAYIFLAIEALADGGVAAGLPRELAL
Sbjct:    1 MEILPIPAESFKVGFIGAGKMAESIARGVVASGVLPPNRICTAVHSNLNRRDVFESFGVNVFSTSEEVVKESDVVIFSVKPQVVKKAVTELKSKLSKNKILVSVAAGIKLNDLQEWSGQDRFIRVMPNTPAAVGEAASVMSLGTGATEEDGAIVAMLFGAVGKILKADEKMFDAVTGLSGSGPAYIFLAIEALADGGVAAGLPRELAL 208          
BLAST of FC931177 vs. ExPASy Swiss-Prot
Match: P5CR_PEA (Pyrroline-5-carboxylate reductase OS=Pisum sativum GN=PROC PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.126e-72
Identity = 140/208 (67.31%), Postives = 164/208 (78.85%), Query Frame = 1
Query:   52 MDAFPIPAESFILGFIGAGKMAESIAKGMAKSGVLPPDRICTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKLKDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELAL 675
            M+  PI ++S+ LGFIGAGKMAESIAKG ++SGVLP  RI TA HSN  RR AFESIG+ VLS N+                      ++++PLL++ KLLVSVAAG+KLKDLQEW GH RFIRVMPNTP+AVG+AA+VMSLGG ATEED  LI +LFGS+GKIW+AD+K FDAITGLSGSGPAYI+LAIEALADGGVAAGLPR+LAL
Sbjct:    1 MEILPILSDSYTLGFIGAGKMAESIAKGASRSGVLPSSRIVTA-HSNPSRRAAFESIGITVLSSNDDVVRASNVVVFSVKPQLVKDVVLKLKPLLTKDKLLVSVAAGIKLKDLQEWAGHERFIRVMPNTPAAVGQAASVMSLGGAATEEDANLISQLFGSIGKIWKADDKFFDAITGLSGSGPAYIYLAIEALADGGVAAGLPRDLAL 207          
BLAST of FC931177 vs. ExPASy Swiss-Prot
Match: P5CR2_HUMAN (Pyrroline-5-carboxylate reductase 2 OS=Homo sapiens GN=PYCR2 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.461e-28
Identity = 77/201 (38.31%), Postives = 108/201 (53.73%), Query Frame = 1
Query:   88 LGFIGAGKMAESIAKGMAKSGVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKL----KDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELAL 675
            +GFIGAG++A ++A+G   +G+L   +I  ++   NL    A   +GV +   N                        +I   +  + ++VS AAGV +    K L  +    + IR M NTP  V E ATV + G  A  EDG+L+ +L  SVG     +E L DA+TGLSGSGPAY F+A++ALADGGV  GLPR LA+
Sbjct:    3 VGFIGAGQLAYALARGFTAAGILSAHKIIASSPEMNLPTVSALRKMGVNLTRSNKETVKHSDVLFLAVKPHIIPFILDEIGADVQARHIVVSCAAGVTISSVEKKLMAFQPAPKVIRCMTNTPVVVQEGATVYATGTHALVEDGQLLEQLMSSVGFCTEVEEDLIDAVTGLSGSGPAYAFMALDALADGGVKMGLPRRLAI 203          
BLAST of FC931177 vs. ExPASy Swiss-Prot
Match: P5CR1_PONAB (Pyrroline-5-carboxylate reductase 1, mitochondrial OS=Pongo abelii GN=PYCR1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.483e-28
Identity = 80/201 (39.80%), Postives = 107/201 (53.23%), Query Frame = 1
Query:   88 LGFIGAGKMAESIAKGMAKSGVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKL----KDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELAL 675
            +GFIGAG++A ++AKG   +GVL   +I  ++   +L    A   +GVK+   N                        +I   +  + ++VS AAGV +    K L  +    R IR M NTP  V E ATV + G  A  EDG L+ +L  SVG     +E L DA+TGLSGSGPAY F A++ALADGGV  GLPR LA+
Sbjct:    3 VGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGATVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAV 203          
BLAST of FC931177 vs. ExPASy Swiss-Prot
Match: P5CR1_HUMAN (Pyrroline-5-carboxylate reductase 1, mitochondrial OS=Homo sapiens GN=PYCR1 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 5.483e-28
Identity = 80/201 (39.80%), Postives = 107/201 (53.23%), Query Frame = 1
Query:   88 LGFIGAGKMAESIAKGMAKSGVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKL----KDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELAL 675
            +GFIGAG++A ++AKG   +GVL   +I  ++   +L    A   +GVK+   N                        +I   +  + ++VS AAGV +    K L  +    R IR M NTP  V E ATV + G  A  EDG L+ +L  SVG     +E L DA+TGLSGSGPAY F A++ALADGGV  GLPR LA+
Sbjct:    3 VGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMGVKLTPHNKETVQHSDVLFLAVKPHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGATVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAV 203          
BLAST of FC931177 vs. ExPASy Swiss-Prot
Match: P5CR2_PONAB (Pyrroline-5-carboxylate reductase 2 OS=Pongo abelii GN=PYCR2 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.161e-28
Identity = 77/201 (38.31%), Postives = 107/201 (53.23%), Query Frame = 1
Query:   88 LGFIGAGKMAESIAKGMAKSGVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKL----KDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELAL 675
            +GFIGAG++A ++A+G   +G+L   +I  ++   NL    A   +GV +   N                        +I   +    ++VS AAGV +    K L  +    + IR M NTP  V E ATV + G  A  EDG+L+ +L  SVG     +E L DA+TGLSGSGPAY F+A++ALADGGV  GLPR LA+
Sbjct:    3 VGFIGAGQLAYALARGFTAAGILSAHKIIASSPEMNLPTVSALRKMGVNLTRSNKETVKHSDVLFLAVKPHIIPFILDEIGADVQAGHIVVSCAAGVTISSVEKKLMAFQPAPKVIRCMTNTPVVVQEGATVYATGTHALVEDGQLLEQLMSSVGFCTEVEEDLIDAVTGLSGSGPAYAFMALDALADGGVKMGLPRRLAI 203          
BLAST of FC931177 vs. ExPASy Swiss-Prot
Match: P5CR2_MACFA (Pyrroline-5-carboxylate reductase 2 OS=Macaca fascicularis GN=PYCR2 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.595e-27
Identity = 75/201 (37.31%), Postives = 108/201 (53.73%), Query Frame = 1
Query:   88 LGFIGAGKMAESIAKGMAKSGVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKL----KDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELAL 675
            +G IGAG++A ++A+G   +G++   +I  ++   NL    A   +GV +   N                        +I   +  + ++VS AAGV +    K L  +    + IR M NTP  V E ATV ++G  A  EDG+L+ +L  SVG     +E L DA+TGLSGSGPAY F+A++ALADGGV  GLPR LA+
Sbjct:    3 VGIIGAGQLAYALARGFTAAGIVSAHKIIASSPEMNLPTVSALRKMGVNLTRSNKETVKHSDVLFLAVKPHIIPFILDEIGADVQARHIVVSCAAGVTISSVEKKLMAFQPAPKVIRCMTNTPVVVREGATVYAMGTHALVEDGQLLEQLMSSVGFCTEVEEDLIDAVTGLSGSGPAYAFMALDALADGGVKMGLPRRLAV 203          
BLAST of FC931177 vs. ExPASy Swiss-Prot
Match: P5CR2_BOVIN (Pyrroline-5-carboxylate reductase 2 OS=Bos taurus GN=PYCR2 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.721e-27
Identity = 76/201 (37.81%), Postives = 108/201 (53.73%), Query Frame = 1
Query:   88 LGFIGAGKMAESIAKGMAKSGVLPPDRI-CTAVHSNLKRRDAFESIGVKVLSDNNAXXXXXXXXXXXXXXXXXXXXAMQIRPLLSRKKLLVSVAAGVKL----KDLQEWTGHSRFIRVMPNTPSAVGEAATVMSLGGTATEEDGELIGKLFGSVGKIWRADEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELAL 675
            +GFIGAG++A ++A+G   +G+L   +I  ++   +L    A   +GV +   N                        +I   +  + ++VS AAGV +    K L  +    + IR M NTP  V E ATV + G  A  EDG+L+ +L  SVG     +E L DA+TGLSGSGPAY F+A++ALADGGV  GLPR LA+
Sbjct:    3 VGFIGAGQLACALARGFTAAGILSAHKIIASSPEMDLPTVSALRKMGVNLTRSNKETVRHSDVLFLAVKPHIIPFILDEIGADVQARHIVVSCAAGVTISSVEKKLMAFQPAPKVIRCMTNTPVLVREGATVYATGTHALVEDGQLLEQLMSSVGFCTEVEEDLIDAVTGLSGSGPAYAFMALDALADGGVKMGLPRRLAV 203          
The following BLAST results are available for this feature:
BLAST of FC931177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
P5CR_SOYBN2.967e-7467.79Pyrroline-5-carboxylate reductase OS=Glycine max P... [more]
P5CR_ACTCH1.472e-7369.76Pyrroline-5-carboxylate reductase OS=Actinidia chi... [more]
P5CR1_ARATH5.595e-7367.31Pyrroline-5-carboxylate reductase OS=Arabidopsis t... [more]
P5CR_PEA2.126e-7267.31Pyrroline-5-carboxylate reductase OS=Pisum sativum... [more]
P5CR2_HUMAN2.461e-2838.31Pyrroline-5-carboxylate reductase 2 OS=Homo sapien... [more]
P5CR1_PONAB5.483e-2839.80Pyrroline-5-carboxylate reductase 1, mitochondrial... [more]
P5CR1_HUMAN5.483e-2839.80Pyrroline-5-carboxylate reductase 1, mitochondrial... [more]
P5CR2_PONAB7.161e-2838.31Pyrroline-5-carboxylate reductase 2 OS=Pongo abeli... [more]
P5CR2_MACFA1.595e-2737.31Pyrroline-5-carboxylate reductase 2 OS=Macaca fasc... [more]
P5CR2_BOVIN2.721e-2737.81Pyrroline-5-carboxylate reductase 2 OS=Bos taurus ... [more]

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Properties
Property NameValue
Genbank descriptionC34102C09EF PostHarvP1 Citrus clementina cDNA clone C34102C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931177 ID=FC931177; Name=FC931177; organism=Citrus clementina; type=EST; length=679bp
GGAGATATTAGGGGGAAAAAAACTGTTCAGAACAGCGACGACGAGGCGAT
CATGGACGCATTTCCTATTCCTGCCGAAAGCTTCATTCTAGGCTTCATCG
GAGCCGGCAAAATGGCGGAGAGCATTGCCAAAGGAATGGCGAAATCGGGC
GTGTTGCCGCCCGATCGTATCTGCACCGCCGTCCACTCTAATCTCAAACG
CCGTGATGCTTTTGAGTCCATCGGCGTCAAAGTATTATCCGACAATAACG
CCGTTGTTGAATACAGCGATGTGGTTGTTTTCTCTGTGAAACCGCAAGTA
GTTAAAGATGTGGCCATGCAGATAAGGCCGCTGTTATCACGGAAGAAGCT
TTTGGTTTCTGTTGCTGCAGGAGTGAAATTGAAAGACCTTCAGGAATGGA
CTGGTCACAGCCGGTTTATTAGAGTTATGCCTAATACACCTTCTGCTGTA
GGTGAGGCTGCAACAGTTATGAGCTTGGGAGGAACTGCAACTGAAGAGGA
TGGGGAACTAATCGGTAAATTATTCGGATCAGTTGGCAAGATATGGCGAG
CTGATGAGAAATTGTTTGATGCAATCACGGGCCTGAGTGGCAGCGGTCCA
GCATATATATTTTTAGCAATTGAAGCTTTGGCTGATGGAGGTGTAGCTGC
AGGGCTACCGCGAGAACTTGCACTTGGTC
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