FC931196
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931196 vs. ExPASy Swiss-Prot
Match: AGO4B_ORYSJ (Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 1.787e-77 Identity = 76/106 (71.70%), Postives = 94/106 (88.68%), Query Frame = 3 Query: 3 LSEKLCKEQMFSLKQKNVKDDDGEVQELEITVYDYFVNNRNIDLRYSGDLPCINVGKPKRPTYIPLELCELVSLQRYTKALTNLQRASLVEKSRQKPQERMSVLSN 320 LS++ C EQMFSL+Q+N ++G+V E+E+TVYDYFV N+ I+LRYSG+LPCINVGKPKRPTY P+ELC L+ LQRYTKAL+ LQR+SLVEKSRQKPQERMSVL++ Sbjct: 326 LSDRNCNEQMFSLRQRN--GNNGDVDEVEVTVYDYFVKNKGIELRYSGNLPCINVGKPKRPTYFPIELCSLIPLQRYTKALSTLQRSSLVEKSRQKPQERMSVLND 429 HSP 2 Score: 149.443 bits (376), Expect = 1.787e-77 Identity = 68/104 (65.38%), Postives = 85/104 (81.73%), Query Frame = 2 Query: 404 ALKLSKYDNEPMLRSFGISISTNFAQVEGRVLPAPRLKFGNGEDFSPRNGRWNFNNKKLVQPTKIERWAVVNFSARCDIRSLVRDLIKCGENEGILIDQPFDVF 715 AL+ S YD++PMLR+ GISI+ NF QVEGRVL P+LK GNGED PRNGRWNFNNKKL+Q +++WAVVNFSARCD+R+L+RDLI+ +GI + +PFDVF Sbjct: 430 ALRHSNYDSDPMLRASGISIAQNFTQVEGRVLQPPKLKAGNGEDIFPRNGRWNFNNKKLIQTCSVDKWAVVNFSARCDVRNLIRDLIRNASAKGIQMAEPFDVF 533
BLAST of FC931196 vs. ExPASy Swiss-Prot
Match: AGO4A_ORYSJ (Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 8.796e-77 Identity = 78/107 (72.90%), Postives = 92/107 (85.98%), Query Frame = 3 Query: 3 LSEKLCKEQMFSLKQKNVKDDDGEVQELEITVYDYFVNNRNIDLRYSGDLPCINVGKPKRPTYIPLELCELVSLQRYTKALTNLQRASLVEKSRQKPQERMSVLSNV 323 LSE+ C EQMF+LKQ+N DGE + +E++VY+YFV NR I+LRYSGD PCINVGKPKRPTY P+ELC LV LQRYTKAL+ LQR+SLVEKSRQKP+ERMSVLS+V Sbjct: 319 LSERNCYEQMFTLKQRN---GDGEPEGVEVSVYEYFVKNRGIELRYSGDFPCINVGKPKRPTYFPIELCSLVPLQRYTKALSTLQRSSLVEKSRQKPEERMSVLSDV 422 HSP 2 Score: 148.288 bits (373), Expect = 8.796e-77 Identity = 70/107 (65.42%), Postives = 83/107 (77.57%), Query Frame = 2 Query: 392 VFLKALKLSKYDNEPMLRSFGISISTNFAQVEGRVLPAPRLKFGNGEDFSPRNGRWNFNNKKLVQPTKIERWAVVNFSARCDIRSLVRDLIKCGENEGILIDQPFDV 712 V LK S YD+EPML S GISI+ F QV GRVL AP+LK GNGED RNGRWNFNNK+L++ + IE+WAVVNFSARC+IR LVRD+IKCG +GI ++ PFDV Sbjct: 418 VLSDVLKRSNYDSEPMLNSCGISIARGFTQVAGRVLQAPKLKAGNGEDLFARNGRWNFNNKRLIKASSIEKWAVVNFSARCNIRDLVRDIIKCGGMKGIKVEDPFDV 524
BLAST of FC931196 vs. ExPASy Swiss-Prot
Match: AGO15_ORYSJ (Protein argonaute 15 OS=Oryza sativa subsp. japonica GN=AGO15 PE=2 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.883e-58 Identity = 64/107 (59.81%), Postives = 77/107 (71.96%), Query Frame = 3 Query: 3 LSEKLCKEQMFSLKQKNVKDDDGEVQELEITVYDYFVNNRNIDLRYSGDLPCINVGKPKRPTYIPLELCELVSLQRYTKALTNLQRASLVEKSRQKPQERMSVLSNV 323 LSE C Q F +K+KN V+E +TV++Y+ N IDL+ S PC+NVGKPKRPTYIPLELC LV LQRY KAL+ LQR++LVE+SRQ PQERM VLS V Sbjct: 309 LSEDTCYSQTFQIKRKNGNGGSDTVEE--VTVFEYYRKNWKIDLKGSAHFPCLNVGKPKRPTYIPLELCHLVPLQRYKKALSTLQRSTLVERSRQNPQERMFVLSGV 413 HSP 2 Score: 120.939 bits (302), Expect = 1.883e-58 Identity = 57/109 (52.29%), Postives = 74/109 (67.89%), Query Frame = 2 Query: 389 FVFLKALKLSKYDNEPMLRSFGISISTNFAQVEGRVLPAPRLKFGNGEDFSPRNGRWNFNNKKLVQPTKIERWAVVNFSARCDIRSLVRDLIKCGENEGILIDQPFDVF 715 FV L+ S Y++ PMLR GISI+ F QV RVLPAP+LK G+GED RNGRWNFN +L+QP +++RW VVNFSA+C+ L + LI CG +G+ +D VF Sbjct: 408 FVLSGVLRDSDYNSVPMLRECGISIAQEFTQVAARVLPAPKLKSGDGEDIFARNGRWNFNKNRLIQPKRVQRWVVVNFSAQCNAHHLAQRLIHCGNLKGLPVDPEDHVF 516
BLAST of FC931196 vs. ExPASy Swiss-Prot
Match: AGO16_ORYSJ (Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 7.719e-57 Identity = 58/105 (55.24%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 392 VFLKALKLSKYDNEPMLRSFGISISTNFAQVEGRVLPAPRLKFGNGEDFSPRNGRWNFNNKKLVQPTKIERWAVVNFSARCDIRSLVRDLIKCGENEGILIDQPF 706 V A+K ++YD++P+L S GI I +V+GRVL AP L GN ED P GRWN+NNK+L +P KIERWA+VNFSARCD+ + RDLI CG +GI+I++PF Sbjct: 396 VVTDAVKNNRYDDDPILSSCGIKIEKQLTRVDGRVLSAPTLVVGNSEDCIPNRGRWNYNNKRLFEPVKIERWAIVNFSARCDMSRISRDLINCGRTKGIIIERPF 500 HSP 2 Score: 112.464 bits (280), Expect = 7.719e-57 Identity = 58/106 (54.72%), Postives = 80/106 (75.47%), Query Frame = 3 Query: 3 LSEKLCKEQMFSLKQKNVKDDDGEVQELEITVYDYFVNNRNIDLRYSGDLPCINVGKPKRPTYIPLELCELVSLQRYTKALTNLQRASLVEKSRQKPQERMSVLSN 320 LS++ C Q F +K V++ E + +EITV +YF ++ +DL LPC++VGKPKRP Y+P+ELC +VSLQRYTKAL++ QRA+LVEKSRQKPQERM V+++ Sbjct: 299 LSDEPCSRQTFPMK---VRNGSSEGETVEITVQEYF-KSKQVDLTMPY-LPCLDVGKPKRPNYVPIELCHMVSLQRYTKALSSQQRATLVEKSRQKPQERMRVVTD 399
BLAST of FC931196 vs. ExPASy Swiss-Prot
Match: AGO1B_ORYSJ (Protein argonaute 1B OS=Oryza sativa subsp. japonica GN=AGO1B PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.906e-24 Identity = 33/79 (41.77%), Postives = 45/79 (56.96%), Query Frame = 2 Query: 398 LKALKLSKYDNEPMLRSFGISISTNFAQVEGRVLPAPRLKF---GNGEDFSPRNGRWNFNNKKLVQPTKIERWAVVNFS 625 L+ + + Y + + FGI I A VE RVLP PRLK+ G +D PR G+WN NKK+V ++ WA +NFS Sbjct: 602 LRTVSHNAYHEDQYAQEFGIKIDERLASVEARVLPPPRLKYHDSGREKDVLPRVGQWNMMNKKMVNGGRVNNWACINFS 680 HSP 2 Score: 64.6994 bits (156), Expect = 1.906e-24 Identity = 32/81 (39.51%), Postives = 51/81 (62.96%), Query Frame = 3 Query: 60 DDDGEVQELEITVYDYFVNNRNIDLRYSGDLPCINVGKPKRPTYIPLELCELVSLQRYTKALTNLQRASLVEKSRQKPQER 302 DD G V+ TV YF+ ++++ LPC+ VG +RP Y+P+E+C++V QRY+K L Q +L++ + Q+PQER Sbjct: 522 DDRGTVK----TVVQYFLETYGFSIQHT-TLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQER 597
BLAST of FC931196 vs. ExPASy Swiss-Prot
Match: AGO1A_ORYSJ (Protein argonaute 1A OS=Oryza sativa subsp. japonica GN=AGO1A PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 2.039e-23 Identity = 36/94 (38.30%), Postives = 49/94 (52.13%), Query Frame = 2 Query: 398 LKALKLSKYDNEPMLRSFGISISTNFAQVEGRVLPAPRLKF---GNGEDFSPRNGRWNFNNKKLVQPTKIERWAVVNFSARCD---IRSLVRDL 661 L+ + + Y +P + FGI I A VE RVLP P LK+ G +D PR G+WN NKK+V ++ W +NFS RS R+L Sbjct: 565 LQTVHHNAYHQDPYAQEFGIRIDERLASVEARVLPPPWLKYHDSGREKDVLPRIGQWNMMNKKMVNGGRVNNWTCINFSRHVQDNAARSFCREL 658 HSP 2 Score: 63.1586 bits (152), Expect = 2.039e-23 Identity = 33/89 (37.08%), Postives = 55/89 (61.80%), Query Frame = 3 Query: 60 DDDGEVQELEITVYDYFVNNRNIDLRYSGDLPCINVGKPKRPTYIPLELCELVSLQRYTKALTNLQRASLVEKSRQKPQER-MSVLSNV 323 D+ G V+ TV YF +++++ LPC+ VG +RP Y+P+E+C++V QRY+K L Q +L++ + Q+PQER + +L V Sbjct: 485 DNHGTVK----TVVQYFQETYGFNIKHT-TLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQERELDILQTV 568
BLAST of FC931196 vs. ExPASy Swiss-Prot
Match: PINH_ARATH (Protein PINHEAD OS=Arabidopsis thaliana GN=At5g43810 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.458e-23 Identity = 34/79 (43.04%), Postives = 50/79 (63.29%), Query Frame = 2 Query: 398 LKALKLSKYDNEPMLRSFGISISTNFAQVEGRVLPAPRLKF---GNGEDFSPRNGRWNFNNKKLVQPTKIERWAVVNFS 625 L+ ++ + YD +P + FG++IS A VE R+LPAP LK+ G +D P+ G+WN NKK++ + RWA VNFS Sbjct: 483 LRTVQHNAYDQDPYAKEFGMNISEKLASVEARILPAPWLKYHENGKEKDCLPQVGQWNMMNKKMINGMTVSRWACVNFS 561 HSP 2 Score: 55.4546 bits (132), Expect = 3.458e-23 Identity = 25/70 (35.71%), Postives = 45/70 (64.29%), Query Frame = 3 Query: 93 TVYDYFVNNRNIDLRYSGDLPCINVGKPKRPTYIPLELCELVSLQRYTKALTNLQRASLVEKSRQKPQER 302 +V +YF ++++ LPC+ VG K+ +Y+P+E C++V QRYTK L Q +L++ + Q+P++R Sbjct: 410 SVIEYFQEMYGFTIQHT-HLPCLQVGNQKKASYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDR 478
BLAST of FC931196 vs. ExPASy Swiss-Prot
Match: AGOL_ARATH (Argonaute-like protein At2g27880 OS=Arabidopsis thaliana GN=At2g27880 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.498e-23 Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 2 Query: 398 LKALKLSKYDNEPMLRSFGISISTNFAQVEGRVLPAPRLKF---GNGEDFSPRNGRWNFNNKKLVQPTKIERWAVVNFSARCDIRSLVRDLIK 667 +K L + N+ + + FG+S++T A +E RVLP P LK+ G + +PR G+WN +KK+V K+ W V+FS R D R L ++ K Sbjct: 502 IKNLVVKNNYNDDLSKEFGMSVTTQLASIEARVLPPPMLKYHDSGKEKMVNPRLGQWNMIDKKMVNGAKVTSWTCVSFSTRID-RGLPQEFCK 593 HSP 2 Score: 61.2326 bits (147), Expect = 4.498e-23 Identity = 34/101 (33.66%), Postives = 53/101 (52.48%), Query Frame = 3 Query: 21 KEQMFSLKQKNVKDDDGEVQELEITVYDYFVNNRNIDLRYSGDLPCINVGKPKRPTYIPLELCELVSLQRYTKALTNLQRASLVEKSRQKPQERMSVLSNV 323 +E F+L+ K+ K TV YF N ++Y LP I G RP Y+P+ELC++ QRYTK L Q +L++ + Q+P +R + + N+ Sbjct: 417 RELRFTLEDKSEK-----------TVVQYFAEKYNYRVKYQA-LPAIQTGSDTRPVYLPMELCQIDEGQRYTKRLNEKQVTALLKATCQRPPDRENSIKNL 505
BLAST of FC931196 vs. ExPASy Swiss-Prot
Match: AGO1D_ORYSJ (Protein argonaute 1D OS=Oryza sativa subsp. japonica GN=AGO1D PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.288e-22 Identity = 33/73 (45.21%), Postives = 44/73 (60.27%), Query Frame = 2 Query: 416 SKYDNEPMLRSFGISISTNFAQVEGRVLPAPRLKF---GNGEDFSPRNGRWNFNNKKLVQPTKIERWAVVNFS 625 + Y +P + FGI IS A VE R+LPAPRLK+ G +D PR G+WN NKK+V ++ W VNF+ Sbjct: 531 NSYHEDPYAKEFGIKISERLALVEARILPAPRLKYNETGREKDCLPRVGQWNMMNKKMVNGGRVRSWICVNFA 603 HSP 2 Score: 57.3806 bits (137), Expect = 1.288e-22 Identity = 26/70 (37.14%), Postives = 45/70 (64.29%), Query Frame = 3 Query: 93 TVYDYFVNNRNIDLRYSGDLPCINVGKPKRPTYIPLELCELVSLQRYTKALTNLQRASLVEKSRQKPQER 302 +V YF ++++ LPC+ VG +RP Y+P+E+C++V QRY+K L Q +L+E++ Q+P +R Sbjct: 452 SVVQYFQETYGFAIQHTY-LPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNQNQIRALLEETCQRPHDR 520
BLAST of FC931196 vs. ExPASy Swiss-Prot
Match: PNH1_ORYSJ (Protein argonaute PNH1 OS=Oryza sativa subsp. japonica GN=PHN1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.250e-22 Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 2 Query: 398 LKALKLSKYDNEPMLRSFGISISTNFAQVEGRVLPAPRLKF---GNGEDFSPRNGRWNFNNKKLVQPTKIERWAVVNFS 625 L+ ++ + Y+ +P + FGI+IS VE RVLPAP LK+ G ++ P+ G+WN NKK++ K+ WA +NFS Sbjct: 478 LQTVQQNGYEQDPYAKEFGINISEKLTSVEARVLPAPWLKYHDTGKEKECLPQVGQWNMVNKKVINGCKVNHWACINFS 556 HSP 2 Score: 55.4546 bits (132), Expect = 6.250e-22 Identity = 28/79 (35.44%), Postives = 48/79 (60.76%), Query Frame = 3 Query: 93 TVYDYFVNNRNIDLRYSGDLPCINVGKPKRPTYIPLELCELVSLQRYTKALTNLQRASLVEKSRQKPQER-MSVLSNVK 326 +V +YF +++ LPC+ VG K+ Y+P+E C++V QRYTK L Q SL++ + ++P+E+ M +L V+ Sbjct: 405 SVVEYFKEMYGFTIQHP-HLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITSLLKVTCRRPREQEMDILQTVQ 482 The following BLAST results are available for this feature:
BLAST of FC931196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931196 ID=FC931196; Name=FC931196; organism=Citrus clementina; type=EST; length=716bpback to top |