FC931203

Overview
NameFC931203
Unique NameFC931203
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length444
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig451 contig Ccv1_Contig451:50..493. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931203 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 5.107e-67
Identity = 127/141 (90.07%), Postives = 130/141 (92.20%), Query Frame = 1
Query:   22 QDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 444
            +DI+GNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCK+INPDE           ILSGEGNEKVQDL
Sbjct:  257 KDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDL 397          
BLAST of FC931203 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 6.670e-67
Identity = 127/141 (90.07%), Postives = 130/141 (92.20%), Query Frame = 1
Query:   22 QDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 444
            +DISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKS+VHDVVLVGGSTRIPKVQQLLQDFFNGKELCK+INPDE           ILSGEGNEKVQDL
Sbjct:  257 KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDL 397          
BLAST of FC931203 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 251.521 bits (641), Expect = 1.138e-66
Identity = 126/141 (89.36%), Postives = 130/141 (92.20%), Query Frame = 1
Query:   22 QDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 444
            +DI+GNPRALRRLRT+CERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCK+INPDE           ILSGEGNEKVQDL
Sbjct:  257 KDITGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQGAILSGEGNEKVQDL 397          
BLAST of FC931203 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 242.276 bits (617), Expect = 6.902e-64
Identity = 121/141 (85.82%), Postives = 126/141 (89.36%), Query Frame = 1
Query:   22 QDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 444
            QDI+G PRALRRLRTACERAKRTLSSTAQTTIEIDSLY G DFYS ITRARFEE+NMDLFRKCMEPVEKCLRDAKMDKSTVH++VLVGGSTRIPKVQQLLQDFFNGKELCK+INPDE           ILSGEGNEKVQDL
Sbjct:  257 QDITGQPRALRRLRTACERAKRTLSSTAQTTIEIDSLYGGADFYSPITRARFEEMNMDLFRKCMEPVEKCLRDAKMDKSTVHEIVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDL 397          
BLAST of FC931203 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 1.177e-63
Identity = 122/142 (85.92%), Postives = 129/142 (90.85%), Query Frame = 1
Query:   22 QDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQL-LQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 444
            +DI+GNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEG+DFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQ+ + +FFNGKELCK+INPDE           ILSGEGNEKVQDL
Sbjct:  257 KDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQVAMTNFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDL 398          
BLAST of FC931203 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 9.966e-63
Identity = 119/141 (84.40%), Postives = 127/141 (90.07%), Query Frame = 1
Query:   22 QDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 444
            +DISGN RALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY+TITRARFEE+NMDLFRKCMEPVEKCLRDAK+DKS VH+VVLVGGSTRIPKV QLLQDFFNGKELCK+INPDE           ILSG+G+EKVQDL
Sbjct:  256 KDISGNARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYATITRARFEEMNMDLFRKCMEPVEKCLRDAKIDKSQVHEVVLVGGSTRIPKVHQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGQGDEKVQDL 396          
BLAST of FC931203 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 2.900e-62
Identity = 118/141 (83.69%), Postives = 127/141 (90.07%), Query Frame = 1
Query:   22 QDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 444
            +DISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSL++GIDFY+ ITRARFEELN+DLFRKCMEPVEKCLRDAKMDK+++ DVVLVGGSTRIPKVQQLL DFFNGKELCK+INPDE           ILSGEGNEKVQDL
Sbjct:  257 KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFDGIDFYAPITRARFEELNIDLFRKCMEPVEKCLRDAKMDKNSIDDVVLVGGSTRIPKVQQLLVDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDL 397          
BLAST of FC931203 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 236.498 bits (602), Expect = 3.787e-62
Identity = 119/141 (84.40%), Postives = 124/141 (87.94%), Query Frame = 1
Query:   22 QDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 444
            +DI   P  +RRLRTACERAKRTLSSTAQTTIEIDSLYEG+DFYS ITRARFEELN+DLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCK+INPDE           ILSGEGNEKVQDL
Sbjct:  257 KDIMETPGHIRRLRTACERAKRTLSSTAQTTIEIDSLYEGVDFYSPITRARFEELNIDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDL 397          
BLAST of FC931203 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 1.489e-58
Identity = 115/137 (83.94%), Postives = 121/137 (88.32%), Query Frame = 1
Query:   22 QDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEK 432
            +DISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSL+EGIDF    +RARFEELNMDLFRKCMEPVEKCLRDAKMDKS+VHDVVLVGGSTRIPKVQQ LQDFFNGKELCK+INPDE           ILSGEGNE+
Sbjct:  255 KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFTPRSSRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQ-LQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNER 390          
BLAST of FC931203 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 6.257e-57
Identity = 110/141 (78.01%), Postives = 121/141 (85.82%), Query Frame = 1
Query:   22 QDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKNINPDEXXXXXXXXXXXILSGEGNEKVQDL 444
            +D+  +PRALRRLRTACERAKRTLSS AQTTIE+DSL+EG+DF ++ITRARFEEL MDLFRKCM+PVEKCL DAKMDK TVHDVVLVGGSTRIPKVQQLLQDFFNGKEL K+INPDE           IL+GEG EKVQDL
Sbjct:  257 KDLKTSPRALRRLRTACERAKRTLSSAAQTTIELDSLFEGVDFATSITRARFEELCMDLFRKCMDPVEKCLHDAKMDKMTVHDVVLVGGSTRIPKVQQLLQDFFNGKELNKSINPDEAVAYGAAVQAAILTGEGGEKVQDL 397          
The following BLAST results are available for this feature:
BLAST of FC931203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_SOLLC5.107e-6790.07Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP7C_PETHY6.670e-6790.07Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP71_ARATH1.138e-6689.36Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP72_ARATH6.902e-6485.82Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP71_SOLLC1.177e-6385.92Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP70_SOYBN9.966e-6384.40Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP73_ARATH2.900e-6283.69Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP7E_SPIOL3.787e-6284.40Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP70_MAIZE1.489e-5883.94Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP70_CHLRE6.257e-5778.01Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]

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Properties
Property NameValue
Genbank descriptionC34102F02EF PostHarvP1 Citrus clementina cDNA clone C34102F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931203 ID=FC931203; Name=FC931203; organism=Citrus clementina; type=EST; length=444bp
GGAGTTTAAGAGGAAGAACATCAGGATATTAGTGGCAACCCTAGAGCTCT
TAGGAGATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTA
CTGCCCAGACTACAATTGAGATTGATTCTTTGTATGAGGGTATTGACTTC
TACTCAACCATAACTCGTGCCAGATTTGAGGAGTTGAACATGGATCTCTT
CAGGAAGTGTATGGAGCCTGTTGAGAAATGTTTGAGGGATGCTAAGATGG
ACAAGAGCACTGTCCACGATGTTGTGCTTGTGGGTGGTTCCACTAGGATT
CCCAAGGTGCAACAGCTTTTGCAAGACTTCTTCAATGGCAAGGAGCTCTG
CAAGAACATTAATCCAGATGAGGCTGTTGCTTATGGTGCTGCTGTTCAGG
CTGCCATCCTGAGCGGCGAGGGCAATGAGAAGGTTCAGGATCTG
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