FC931204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931204 vs. ExPASy Swiss-Prot
Match: FNTA_PEA (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Pisum sativum GN=FTA PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 3.038e-60 Identity = 108/165 (65.45%), Postives = 132/165 (80.00%), Query Frame = 1 Query: 1 GWEDELDYCQILLGEDIFNNSAWNQRYFVVTRSPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGLYKDDTESWINDPRISSVCLKVLSTKSNYVFALSTLLDLICHGFRPSEEFREAINALNTPDSGPLDSDLGRAICRVLECVDPLRCNYWLWRKSKLP 495 GWEDEL YC LL EDIFNNSAWNQRYFV+TRSP+LGGL AMR+SEV FT+EAI+ PENES WRYLRGL+KD++ ++ND ++SS+CLK+L TKSNY+FALSTLLDL +P+E+FR+AI AL DSD+ IC +LE VDP+R NYW+WRKS+LP Sbjct: 166 GWEDELSYCSELLAEDIFNNSAWNQRYFVITRSPVLGGLKAMRESEVLFTVEAIISYPENESSWRYLRGLFKDESTLYVNDAQVSSLCLKILKTKSNYLFALSTLLDLSASVIQPNEDFRDAIEALRLQILIKQDSDIAITICSILEQVDPIRVNYWVWRKSRLP 330
BLAST of FC931204 vs. ExPASy Swiss-Prot
Match: FNTA_ARATH (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Arabidopsis thaliana GN=FTA PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 1.725e-55 Identity = 102/165 (61.82%), Postives = 128/165 (77.58%), Query Frame = 1 Query: 1 GWEDELDYCQILLGEDIFNNSAWNQRYFVVTRSPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGLYKDDTESWINDPRISSVCLKVLS-TKSNYVFALSTLLDLICHGFRPSEEFREAINALNTPDSGPLDSDLGRAICRVLECVDPLRCNYWLWRKSKL 492 GWEDELDYC LL D+FNNSAWNQRY+V+T+SPLLGGL AMR+SEV++TI+AIL NP NES WRYL+ LYKDD ESWI+DP +SSVCL VLS T + FALSTLLDL+C G RP+ E ++++ AL + +++L +C +L VDP+R NYW WRKSK+ Sbjct: 174 GWEDELDYCHELLEADVFNNSAWNQRYYVITQSPLLGGLEAMRESEVSYTIKAILTNPANESSWRYLKALYKDDKESWISDPSVSSVCLNVLSRTDCFHGFALSTLLDLLCDGLRPTNEHKDSVRALANEEP---ETNLANLVCTILGRVDPVRANYWAWRKSKI 335
BLAST of FC931204 vs. ExPASy Swiss-Prot
Match: FNTA_SOLLC (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Solanum lycopersicum GN=FTA PE=2 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.236e-53 Identity = 98/162 (60.49%), Postives = 126/162 (77.78%), Query Frame = 1 Query: 1 GWEDELDYCQILLGEDIFNNSAWNQRYFVVTRSPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGLYKDDTESWINDPRISSVCLKVLSTKSNYVFALSTLLDLICHGFRPSEEFREAINALNTPDSGPLDSDLGRAICRVLECVDPLRCNYWLWRKS 486 GWEDEL YCQ LL +DI+NNSAWNQRYFVVTRSPLLGGL+AMR+ EVN+T++AI +PENESPWRYLRGLYK+DT+S + D +++SV VL++++++V AL LLDL+CH PS+E + A++ L TP S D L + IC +LE DP+R YW WRKS Sbjct: 164 GWEDELAYCQQLLEDDIYNNSAWNQRYFVVTRSPLLGGLVAMRELEVNYTVQAIRASPENESPWRYLRGLYKNDTQSLVQDSQVASVLWDVLTSQNSHVHALRFLLDLLCHDLEPSQELKSAVDVL-TPQSCSPDLALTKKICSILEHADPMRVKYWNWRKS 324
BLAST of FC931204 vs. ExPASy Swiss-Prot
Match: FNTA_DICDI (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Dictyostelium discoideum GN=fntA PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.171e-11 Identity = 53/171 (30.99%), Postives = 81/171 (47.37%), Query Frame = 1 Query: 4 WEDELDYCQILLGEDIFNNSAWNQRYFVVTRSPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGLYKDDTESWINDPRISSVCLKVLSTKSNYVFALSTLLDLICHGFRPSEEFREAINALNTPDSGPLDSDLGRAICRVL-ECVDPLRCNYWLWRKSKLPLTVSSQ 513 W EL LL D NNS WN R+FV++ +++ + EV F I +P NESPW YL+GL+K S I P + + L++ KS Y+ S + +I ++ N+LN IC++L E +DP+ NYW ++ + T+S Q Sbjct: 170 WNGELAMVDKLLSLDHRNNSVWNHRFFVISNLNPSPFPLSLIEREVEFAFNHIRHSPNNESPWSYLKGLFKGQKISTIY-PSLLDILLEM---KSKYI-GCSHVNSIILDIYQEQNTKISLENSLN--------------ICKLLSETIDPIHKNYWNFKYN----TISDQ 317
BLAST of FC931204 vs. ExPASy Swiss-Prot
Match: FNTA_HUMAN (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Homo sapiens GN=FNTA PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.608e-11 Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 4 WEDELDYCQILLGEDIFNNSAWNQRYFVVTRSPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGLYKD 219 W++EL Y LL ED+ NNS WNQRYFV++ + A+ + EV +T+E I P NES W YL+G+ +D Sbjct: 216 WDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDR-AVLEREVQYTLEMIKLVPHNESAWNYLKGILQD 286
BLAST of FC931204 vs. ExPASy Swiss-Prot
Match: FNTA_BOVIN (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Bos taurus GN=FNTA PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.608e-11 Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 4 WEDELDYCQILLGEDIFNNSAWNQRYFVVTRSPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGLYKD 219 W++EL Y LL ED+ NNS WNQRYFV++ + A+ + EV +T+E I P NES W YL+G+ +D Sbjct: 212 WDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDR-AILEREVQYTLEMIKLVPHNESAWNYLKGILQD 282
BLAST of FC931204 vs. ExPASy Swiss-Prot
Match: FNTA_RAT (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Rattus norvegicus GN=Fnta PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11 Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 4 WEDELDYCQILLGEDIFNNSAWNQRYFVVTRSPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGLYKD 219 W++EL Y LL ED+ NNS WNQR+FV++ + A+ + EV +T+E I P NES W YL+G+ +D Sbjct: 216 WDNELQYVDQLLKEDVRNNSVWNQRHFVISNTTGYSDR-AVLEREVQYTLEMIKLVPHNESAWNYLKGILQD 286
BLAST of FC931204 vs. ExPASy Swiss-Prot
Match: FNTA_MOUSE (Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha OS=Mus musculus GN=Fnta PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.911e-11 Identity = 32/72 (44.44%), Postives = 46/72 (63.89%), Query Frame = 1 Query: 4 WEDELDYCQILLGEDIFNNSAWNQRYFVVTRSPLLGGLIAMRDSEVNFTIEAILGNPENESPWRYLRGLYKD 219 W++EL Y LL ED+ NNS WNQR+FV++ + A+ + EV +T+E I P NES W YL+G+ +D Sbjct: 216 WDNELQYVDQLLKEDVRNNSVWNQRHFVISNTTGYSDR-AVLEREVQYTLEMIKLVPHNESAWNYLKGILQD 286 The following BLAST results are available for this feature:
BLAST of FC931204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931204 ID=FC931204; Name=FC931204; organism=Citrus clementina; type=EST; length=772bpback to top |