FC931214

Overview
NameFC931214
Unique NameFC931214
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length689
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12680 contig Ccv1_Contig12680:107..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931214 vs. ExPASy Swiss-Prot
Match: PLZ12_LUPPO (Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.180e-51
Identity = 102/116 (87.93%), Postives = 110/116 (94.83%), Query Frame = 2
Query:  341 MTLDELFEQKGEVAKAVLEELEKVMGAYGYSIEHILMVDIIPDPAVRKAMNEINAAXRLQLASVYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQANTDGLRENIXDFSHKVEG 688
            M LD+LFEQKGEVAK+VLEELEKVMG YGY+IEHILMVDIIPD +VR+AMNEINAA R+QLAS+YKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQA TDGLRENI +FSHKVEG
Sbjct:    1 MNLDDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQLASLYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEG 116          
BLAST of FC931214 vs. ExPASy Swiss-Prot
Match: Y1128_SYNY3 (Uncharacterized protein slr1128 OS=Synechocystis sp. (strain PCC 6803) GN=slr1128 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.538e-12
Identity = 47/190 (24.74%), Postives = 100/190 (52.63%), Query Frame = 2
Query:   35 IDQASVGIVERWGRFEKLAEPGLHFFNPCAGQWLAGILSTRINSLDVRIETK-TKDNVFVQLLCSIQYRIVRANADDAFYELQNPKEQIQAYVFDVVRALVPRMTLDELFEQKGEVAKAVLEELEKVMGAYGYSIEHILMVDIIPDPAVRKAMNEINAAXRLQLASVYKGEAEKILQVKRAEAEAEAKYL 601
            +++ +  +VER G + K   PGL+F  P   + +    +TR   +D+  ++  TKDNV +     + +RI+  + + A+Y+++N +  +   V   +R+ + ++ LD+ F  + E+ + +L EL+     +G  +  + + DI+P  AV  +M     A R + A++   E ++   +  A+ +A+A+ L
Sbjct:   23 VNEKNEYLVERLGSYNKKLTPGLNFTVPILDR-VVFKQTTREKVIDIPPQSCITKDNVAITADAVVYWRII--DMEKAYYKVENLQSAMVNLVLTQIRSEIGKLELDQTFTARTEINELLLRELDISTDPWGVKVTRVELRDIMPSKAVLDSMELQMTAERKKRAAILTSEGQRDSAINSAQGDAQARVL 209          
BLAST of FC931214 vs. ExPASy Swiss-Prot
Match: Y827_METJA (Uncharacterized protein MJ0827 OS=Methanocaldococcus jannaschii GN=MJ0827 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11
Identity = 45/173 (26.01%), Postives = 89/173 (51.45%), Query Frame = 2
Query:   35 IDQASVGIVERWGRFEKLAEPGLHFFNPCAGQWLAGILSTRINSLDVRIETKTKDNVFVQLLCSIQYRIVRANADDAFYELQNPKEQIQAYVFDVVRALVPRMTLDELFEQKGEVAKAVLEELEKVMGAYGYSIEHILMVDIIPDPAVRKAMNEINAAXRLQLASVYKGEAEK 553
            ++Q   G++ R GR     +PG++   P     +   + TR+  +  + E  TKDN  V++   + YR++  + + A  E+++ +  I       +RA++  M LDE+  ++  +   +LE L++   A+G  IE + + +I P   ++ AM +   A RL+ A++ + E EK
Sbjct:   28 VNQYEGGLIFRLGRVIGKLKPGINIIIPFLDVPVKVDMRTRVTDIPPQ-EMITKDNAVVKVDAVVYYRVI--DVEKAILEVEDYEYAIINLAQTTLRAIIGSMELDEVLNKREYINSKLLEILDRETDAWGVRIEKVEVKEIDPPEDIKNAMAQQMKAERLKRAAILEAEGEK 197          
The following BLAST results are available for this feature:
BLAST of FC931214 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
PLZ12_LUPPO6.180e-5187.93Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE... [more]
Y1128_SYNY32.538e-1224.74Uncharacterized protein slr1128 OS=Synechocystis s... [more]
Y827_METJA8.165e-1126.01Uncharacterized protein MJ0827 OS=Methanocaldococc... [more]
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Properties
Property NameValue
Genbank descriptionC34102G02EF PostHarvP1 Citrus clementina cDNA clone C34102G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931214 ID=FC931214; Name=FC931214; organism=Citrus clementina; type=EST; length=689bp
GATGGGGAATTCGTTTTGCATGTTGTGTGGGTGCATCGACCAGGCGAGTG
TCGGCATCGTCGAGAGGTGGGGCCGGTTCGAGAAGTTGGCTGAACCGGGT
CTACACTTTTTCAACCCTTGCGCGGGGCAGTGGCTCGCTGGTATCCTCTC
CACCAGGATCAATTCCCTCGATGTCCGCATCGAGACCAAAACCAAGGACA
ATGTCTTTGTGCAACTGCTGTGTTCAATTCAGTACCGGATTGTCAGAGCA
AATGCTGATGATGCATTTTATGAGTTGCAGAACCCCAAAGAGCAGATCCA
GGCTTATGTGTTTGATGTGGTTCGTGCTCTTGTTCCAAGAATGACATTGG
ATGAGCTCTTTGAACAAAAAGGCGAAGTTGCTAAGGCTGTTTTGGAGGAA
CTTGAGAAGGTGATGGGTGCATATGGATATAGCATTGAGCACATATTGAT
GGTAGACATTATACCTGATCCTGCTGTGCGCAAGGCAATGAATGAGATCA
ATGCGGCTCANAGGCTTCAGCTTGCTAGTGTATATAAAGGGGAAGCTGAG
AAGATTCTCCAAGTTAAAAGAGCAGAAGCTGAAGCTGAAGCCAAGTACCT
TGGTGGCGTAGGTGTGGCCAGGCAACGGCAGGCAAATACAGATGGTTTGC
GAGAGAACATTTTNGACTTCTCTCATAAGGTAGAAGGCG
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