FC931220
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931220 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 317.005 bits (811), Expect = 6.552e-86 Identity = 161/223 (72.20%), Postives = 181/223 (81.17%), Query Frame = 1 Query: 61 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVRG*LSPCSS*CPLTFCFEVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCNAGLSYTHTDLIASLTLNDKGDTLNASYYHIVSPLTXYAVGAELTH 729 MVKGPGLYS+IGKKARDLLY+DY SDHKFTVTTY++ GVAIT+SG+KKGELFLADVSTQLKNKNITTDVKVDTNSN++TTITVDEPAPGLK+IFSF+VPDQ+SGK VELQY HEYAGI+T IG TA+P+ ALGTDLSFDTATGNFTKCNAGLS++ +DLIASL LNDKGDT++ASYYH V P+T AVGAELTH Sbjct: 1 MVKGPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGK-------------------VELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTNTAVGAELTH 204
BLAST of FC931220 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 297.745 bits (761), Expect = 4.113e-80 Identity = 151/223 (67.71%), Postives = 171/223 (76.68%), Query Frame = 1 Query: 61 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVRG*LSPCSS*CPLTFCFEVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCNAGLSYTHTDLIASLTLNDKGDTLNASYYHIVSPLTXYAVGAELTH 729 M KGPGLY+EIGKKARDLLYKDYQSDHKF++TTY+ GV ITSSG KKG+LFLADV+TQLKNKN+TTD+KVDTNSNLFTTITVDE APGLK+I SF VPDQRSGK +E+QY H+YAGI T +G TANPI ALGTD+SFDT TG+FTKCNAGLS+T+ DL+ASL LN+KGD L ASYYH VSPLT AVGAE+ H Sbjct: 1 MGKGPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGK-------------------LEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTAVGAEVNH 204
BLAST of FC931220 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2) HSP 1 Score: 270.396 bits (690), Expect = 7.033e-72 Identity = 137/223 (61.43%), Postives = 162/223 (72.65%), Query Frame = 1 Query: 61 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVRG*LSPCSS*CPLTFCFEVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCNAGLSYTHTDLIASLTLNDKGDTLNASYYHIVSPLTXYAVGAELTH 729 MVKGPGLY++IGKKARDLLYKDY SD KFT++TY+ GVAITSSG KKGELFL DV+TQLKNKNITTD+KVDTNSNLFTTITV+EPAPG+K+I SF VP+Q SGK VELQY HEYAGIS+ +G ANPI A G D+SFDT G TK NA +++ DLI SLTLN+KGD L+ASYYH ++PL+ AVG +++H Sbjct: 1 MVKGPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVPEQTSGK-------------------VELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAINPLSNTAVGVDISH 204
BLAST of FC931220 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3) HSP 1 Score: 265.003 bits (676), Expect = 2.955e-70 Identity = 139/223 (62.33%), Postives = 161/223 (72.20%), Query Frame = 1 Query: 61 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVRG*LSPCSS*CPLTFCFEVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCNAGLSYTHTDLIASLTLNDKGDTLNASYYHIVSPLTXYAVGAELTH 729 MVKGPGLY+EIGKKARDLLYKD+ SD KF++TT++ AGVAITS+G KKG+L L DV+ Q + KNITTD+KV T+S T TVDE APGL+SIFSF VPDQ SGK VELQY HEYAGIST +G T NP A+GTD+SFDT +GNFTK NAGLS+T DLIASLT+NDKGD LNASYYHIV+PL AVGAE++H Sbjct: 1 MVKGPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGK-------------------VELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTAVGAEVSH 204
BLAST of FC931220 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3) HSP 1 Score: 250.366 bits (638), Expect = 7.531e-66 Identity = 129/220 (58.64%), Postives = 157/220 (71.36%), Query Frame = 1 Query: 70 GPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVRG*LSPCSS*CPLTFCFEVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCNAGLSYTHTDLIASLTLNDKGDTLNASYYHIVSPLTXYAVGAELTH 729 GPGLY EIGKKARDLLY+DYQ+DHKFT+TTYTS GVAIT++ KK +L ++ +Q+KNKNIT DVK +++SN+ TT+TVDE PGLKSI SF VPDQRSGK ELQY H+YAG+S IG TA+P+ A+G D+S DTATGN TK NAGLS+++ DLIASL LN+KGD+L ASYYHIV+ + AVGAELTH Sbjct: 3 GPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGK-------------------FELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLTASYYHIVNH-SATAVGAELTH 202
BLAST of FC931220 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3) HSP 1 Score: 244.202 bits (622), Expect = 5.397e-64 Identity = 127/223 (56.95%), Postives = 154/223 (69.06%), Query Frame = 1 Query: 61 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSGKVRG*LSPCSS*CPLTFCFEVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCNAGLSYTHTDLIASLTLNDKGDTLNASYYHIVSPLTXYAVGAELTH 729 MVKGPGLY+EIGKKARDLLY+DYQ D KF+VTTY+S GVAIT++G KG LFL DV+TQ+KN N T DVKV T+S+L TT+T DEPAPGLK I +PD +SGK E+QY H+YAGIST +GFTA PI +LGTD++++T +GNF NAG ++T DL ASL LNDKG+ LNASYY IVSP T VGAE++H Sbjct: 1 MVKGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGK-------------------AEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASYYQIVSPST--VVGAEISH 202
BLAST of FC931220 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.598e-62 Identity = 126/221 (57.01%), Postives = 154/221 (69.68%), Query Frame = 1 Query: 70 GPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDE-PAPGLKSIFSFIVPDQRSGKVRG*LSPCSS*CPLTFCFEVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCNAGLSYTHTDLIASLTLNDKGDTLNASYYHIVSPLTXYAVGAELTH 729 GPGLYS IGKKA+DLLY+DYQ+DHKFT+TTYT+ G AIT++ KK +L + ++ +Q+KNKNIT DVK ++ SN+ TTIT D+ APGLK+I SF VPDQ+SGK VELQY H+YAGI+ IG TANP+ A+G D+S DTAT NF K NA LSYT+ DLIASL LN+KGD+L ASYYHIV + AVGAELTH Sbjct: 3 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGK-------------------VELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIVEK-SGTAVGAELTH 203
BLAST of FC931220 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 6.613e-54 Identity = 113/224 (50.45%), Postives = 144/224 (64.29%), Query Frame = 1 Query: 61 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDE-PAPGLKSIFSFIVPDQRSGKVRG*LSPCSS*CPLTFCFEVELQYQHEYAGISTGIGFTANPIXXXXXXXXXXXXALGTDLSFDTATGNFTKCNAGLSYTHTDLIASLTLNDKGDTLNASYYHIVSPLTXYAVGAELTH 729 MV GLY++IGKK RDLLYKDY + KF +TT + GVAIT++G +K E ++ TQ+KNK +T DVK ++ S+L TTITVDE PGLKSI + +VPDQRSGK+ E QY HEYAG++ +G +NP+ ++G D+SFDTAT +FTK NA LS T DLIASL LN+ GDTL ASYYH+V + AVGAEL+H Sbjct: 1 MVVAVGLYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKL-------------------EFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVASYYHLVKNHSGTAVGAELSH 205 The following BLAST results are available for this feature:
BLAST of FC931220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931220 ID=FC931220; Name=FC931220; organism=Citrus clementina; type=EST; length=729bpback to top |