FC931228
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_EMENI (40S ribosomal protein S19 OS=Emericella nidulans GN=rps19 PE=3 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 1.972e-70 Identity = 130/140 (92.86%), Postives = 135/140 (96.43%), Query Frame = 2 Query: 62 MGGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIAKTTV 481 MGGVTVRDVDAQKFI AY+AFLKRQGKLPIPGWVDTVKTSASNELPPQDADW+YVRAAA ARHIY+RKTVGVGRLRK HGSTKNRGSRPAHHVDASG+VDRK LQ+LEKIGVLE DEEKGGRRITQSGQRDLDRIAKTTV Sbjct: 1 MGGVTVRDVDAQKFIVAYAAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWYYVRAAAVARHIYLRKTVGVGRLRKVHGSTKNRGSRPAHHVDASGAVDRKVLQSLEKIGVLEQDEEKGGRRITQSGQRDLDRIAKTTV 140
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19B_YEAST (40S ribosomal protein S19-B OS=Saccharomyces cerevisiae GN=RPS19B PE=1 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 8.064e-48 Identity = 94/141 (66.67%), Postives = 117/141 (82.98%), Query Frame = 2 Query: 62 MGGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDAD-WFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIAKTTV 481 M GV+VRDV AQ FI+AY++FL+RQGKL +PG+VD VKTS+ NE+PPQDA+ WFY RAA+ ARHIYMRK VGVG+L K +G K+RG RP H+DASGS++RK LQALEKIG++E KGGRRI+++GQRDLDRIA T+ Sbjct: 1 MAGVSVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEI-SPKGGRRISENGQRDLDRIAAQTL 140
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19A_YEAST (40S ribosomal protein S19-A OS=Saccharomyces cerevisiae GN=RPS19A PE=1 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.375e-47 Identity = 94/141 (66.67%), Postives = 117/141 (82.98%), Query Frame = 2 Query: 62 MGGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDAD-WFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIAKTTV 481 M GV+VRDV AQ FI+AY++FL+RQGKL +PG+VD VKTS+ NE+PPQDA+ WFY RAA+ ARHIYMRK VGVG+L K +G K+RG RP H+DASGS++RK LQALEKIG++E KGGRRI+++GQRDLDRIA T+ Sbjct: 1 MPGVSVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEI-SPKGGRRISENGQRDLDRIAAQTL 140
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19A_SCHPO (40S ribosomal protein S19-A OS=Schizosaccharomyces pombe GN=rps19a PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.002e-47 Identity = 92/136 (67.65%), Postives = 107/136 (78.68%), Query Frame = 2 Query: 62 MGGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 M GV+V+DVDAQKFI+AY+AFLKR GK+ P W+D VKT EL P D DW+YVRAAA ARHIY+RK VGVGRL K +G + NRG RP+HH D SGSV RK +Q+LEKIGVLE + GGRRI+Q GQRDLDRIA Sbjct: 1 MAGVSVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLE-KSDNGGRRISQQGQRDLDRIA 135
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19B_SCHPO (40S ribosomal protein S19-B OS=Schizosaccharomyces pombe GN=rps19b PE=2 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 1.164e-46 Identity = 91/136 (66.91%), Postives = 107/136 (78.68%), Query Frame = 2 Query: 62 MGGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 M GV+V+DVDAQ+FI+AY+AFLKR GK+ P W+D VKT EL P D DW+YVRAAA ARHIY+RK VGVGRL K +G + NRG RP+HH D SGSV RK +Q+LEKIGVLE + GGRRI+Q GQRDLDRIA Sbjct: 1 MAGVSVKDVDAQQFINAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSVNRGMRPSHHRDGSGSVQRKVVQSLEKIGVLE-KSDNGGRRISQQGQRDLDRIA 135
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_BRABE (40S ribosomal protein S19 OS=Branchiostoma belcheri GN=RPS19 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.178e-36 Identity = 76/135 (56.30%), Postives = 96/135 (71.11%), Query Frame = 2 Query: 65 GGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 GGVTV+DV+ Q+F+ A++AFLK+ GKL +P WVD VKT+ EL P D DWFY+RAA+ ARH+YMR VGVG + K +G K RG++PA S V R LQ+LE I ++E D GGRR+T GQRDLDRIA Sbjct: 3 GGVTVKDVNQQEFVKAFAAFLKKSGKLKLPEWVDLVKTAPHKELAPYDPDWFYLRAASTARHLYMRGGVGVGAMCKIYGGRKRRGTKPAKFRVCSRGVSRTVLQSLEGIKMVEKD-AAGGRRLTSQGQRDLDRIA 136
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_ORYSJ (40S ribosomal protein S19 OS=Oryza sativa subsp. japonica GN=RPS19A PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.590e-35 Identity = 68/132 (51.52%), Postives = 94/132 (71.21%), Query Frame = 2 Query: 74 TVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 TV+DV+ +F+ AYSA LKR GK+ +P WVD VKT+ ELPP D DW+Y RAA+ AR IY+R+ +GVG +K +G + GSRP H +SG++ R LQ L+K+G+++ D KGGR IT G+RDLD++A Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVD-PKGGRLITSQGRRDLDQVA 138
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_RAT (40S ribosomal protein S19 OS=Rattus norvegicus GN=Rps19 PE=2 SV=3) HSP 1 Score: 147.517 bits (371), Expect = 5.994e-35 Identity = 72/136 (52.94%), Postives = 96/136 (70.59%), Query Frame = 2 Query: 62 MGGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 M GVTV+DV+ Q+F+ A +AFLK+ GKL +P WVDTVK + EL P D +WFY RAA+ ARH+Y+R GVG + K +G + G RP+H S SV R+ LQALE + ++E D++ GGR++T GQRDLDRIA Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQD-GGRKLTPQGQRDLDRIA 135
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_MOUSE (40S ribosomal protein S19 OS=Mus musculus GN=Rps19 PE=1 SV=3) HSP 1 Score: 147.517 bits (371), Expect = 5.994e-35 Identity = 72/136 (52.94%), Postives = 96/136 (70.59%), Query Frame = 2 Query: 62 MGGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 M GVTV+DV+ Q+F+ A +AFLK+ GKL +P WVDTVK + EL P D +WFY RAA+ ARH+Y+R GVG + K +G + G RP+H S SV R+ LQALE + ++E D++ GGR++T GQRDLDRIA Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQD-GGRKLTPQGQRDLDRIA 135
BLAST of FC931228 vs. ExPASy Swiss-Prot
Match: RS19_PONAB (40S ribosomal protein S19 OS=Pongo abelii GN=RPS19 PE=2 SV=3) HSP 1 Score: 145.206 bits (365), Expect = 2.975e-34 Identity = 71/136 (52.21%), Postives = 95/136 (69.85%), Query Frame = 2 Query: 62 MGGVTVRDVDAQKFISAYSAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWFYVRAAACARHIYMRKTVGVGRLRKAHGSTKNRGSRPAHHVDASGSVDRKALQALEKIGVLETDEEKGGRRITQSGQRDLDRIA 469 M GVTV+DV+ Q+F+ A +AFLK+ GKL +P WVDTVK + EL P D +WFY RAA+ ARH+Y+R GVG + K +G + G P+H S SV R+ LQALE + ++E D++ GGR++T GQRDLDRIA Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQD-GGRKLTPQGQRDLDRIA 135 The following BLAST results are available for this feature:
BLAST of FC931228 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931228 ID=FC931228; Name=FC931228; organism=Citrus clementina; type=EST; length=676bpback to top |