FC931231

Overview
NameFC931231
Unique NameFC931231
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length703
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931231 vs. ExPASy Swiss-Prot
Match: PNCB_CAEEL (Nicotinate phosphoribosyltransferase OS=Caenorhabditis elegans GN=Y54G2A.17 PE=2 SV=2)

HSP 1 Score: 255.758 bits (652), Expect = 1.674e-67
Identity = 118/192 (61.46%), Postives = 150/192 (78.12%), Query Frame = 3
Query:  126 MVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVASKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFDATSNVAAGKVF 701
            +V PLL D YQ TM YAYWK G H+E AVFD++FRKNPF GE+T+FAGLE+C+RF+ NFK ++ +I +V+  LP + E  F++YL  +N S + + A+ EGSVVFPKVPLL + GP+A+ QL+ET  +NL+NYASLV TNAAR R  +     LLEFGLRRAQGP+GG+ ASKYCYIGGFDATSNV AGK++
Sbjct:   27 LVQPLLTDFYQITMCYAYWKTGTHNEPAVFDVFFRKNPFQGEFTVFAGLEDCLRFVENFKFSQSDIDYVKKILPENAEPEFYEYLETLNGSHLTIEAVAEGSVVFPKVPLLTINGPLAMCQLIETSILNLVNYASLVATNAARFRQASGWKIQLLEFGLRRAQGPNGGLTASKYCYIGGFDATSNVLAGKLY 218          
BLAST of FC931231 vs. ExPASy Swiss-Prot
Match: PNCB_DROME (Nicotinate phosphoribosyltransferase OS=Drosophila melanogaster GN=CG3714 PE=2 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 1.085e-66
Identity = 117/194 (60.31%), Postives = 151/194 (77.84%), Query Frame = 3
Query:  120 NPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVASKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFDATSNVAAGKVF 701
            N +V PLL DLYQ TMAYAYWK+ K D+ AVFDL+FR NPF GE+TIFAGLEEC++F+ +F  ++ +I +++ +LP   E  FF+YL  +   DV ++AI EG+V FP+VP++++EGP+ +VQLLET  + L+NYASL+ TNAAR+R VA K   LLEFGLRRAQGPDGG+ ASKY Y GGFD TSNV AGK+F
Sbjct:   22 NGVVQPLLTDLYQITMAYAYWKSDKTDDTAVFDLFFRNNPFHGEFTIFAGLEECLKFLDSFHYSQSDIEYLKQTLPEGIEHEFFEYLGNLTARDVTLYAIDEGTVAFPRVPIIKIEGPLIIVQLLETTLLTLVNYASLMATNAARYRMVAGKHVKLLEFGLRRAQGPDGGLSASKYSYTGGFDGTSNVLAGKLF 215          
BLAST of FC931231 vs. ExPASy Swiss-Prot
Match: PNCB_DICDI (Nicotinate phosphoribosyltransferase OS=Dictyostelium discoideum GN=naprt PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.956e-65
Identity = 118/201 (58.71%), Postives = 151/201 (75.12%), Query Frame = 3
Query:   87 NQAGRSVSGPTNPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVASKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFDATSNVAA 689
            +Q  +    P N  VTPLL DLYQ TMAY+ WK  +H+  AVFDLYFRK+PFGGE+T+FAGLEE IRF+++F  T+EE+ F+++ +P  CE  F DYL  ++ S V ++A+ EGSVVFP+VPLLRVEGP+ + QL ET  + L+N+ASLV TNAARHR    K K++LEFGLRRAQGPDG + AS+Y Y+GG D TSNV A
Sbjct:   46 DQESKDKIKPLNGFVTPLLTDLYQITMAYSLWKNNRHEIPAVFDLYFRKSPFGGEFTVFAGLEEVIRFVSDFHYTKEEVGFIKEMIP-DCEQEFLDYLSKLDSSSVTLYAMKEGSVVFPRVPLLRVEGPMILCQLFETTLLCLVNFASLVATNAARHRLAVGKEKVMLEFGLRRAQGPDGAMSASRYSYLGGADGTSNVLA 245          
BLAST of FC931231 vs. ExPASy Swiss-Prot
Match: PNCB_DANRE (Nicotinate phosphoribosyltransferase OS=Danio rerio GN=naprt1 PE=2 SV=2)

HSP 1 Score: 236.884 bits (603), Expect = 8.049e-62
Identity = 114/207 (55.07%), Postives = 153/207 (73.91%), Query Frame = 3
Query:   81 SENQAGRSVSGPTNPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVASKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFDATSNVAAGKVF 701
            + N+AG  ++      V PLL DLYQ  MAYAYW+AG+H+E AVF+L+FR NPFGG +++FAGL +C+ F+ NF  +++++ ++R  LP   + GFF YL+ ++CS V V A+ EGSVVF +VPLL V GP+AVVQLLET  + L+NYASLV +NAAR R  A   + L+E GLRRAQGPDGG+ AS+Y YIGGFD TSN  AG+++
Sbjct:    3 TSNEAGSVLN-----RVPPLLTDLYQ--MAYAYWRAGRHNEPAVFELFFRDNPFGGGFSLFAGLSDCLLFLQNFSFSDDDVQYLRSVLPADTDAGFFSYLKELDCSCVSVSAVPEGSVVFARVPLLEVSGPLAVVQLLETSLLCLVNYASLVCSNAARFRLAAGPRRRLMEMGLRRAQGPDGGLTASRYTYIGGFDLTSNALAGRLY 202          
BLAST of FC931231 vs. ExPASy Swiss-Prot
Match: PNCB_BOVIN (Nicotinate phosphoribosyltransferase OS=Bos taurus GN=NAPRT1 PE=2 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 4.134e-58
Identity = 104/188 (55.32%), Postives = 141/188 (75.00%), Query Frame = 3
Query:  135 PLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVASKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFDATSNVAAGKV 698
            PLL DLYQ TMA  YW+AG+  ++A F+L+FR+ PFGG + + AGL +C+RF+  F+L + ++ F+  +LP   +  FF++LR ++CS V V A+ EGS+ FP VPLL+V GP+ VVQLLETP + L++YASL+ TNAAR R +A   K LLE GLRRAQGPDGG+ AS Y Y+GGFDA+SNV AG++
Sbjct:   15 PLLTDLYQATMALGYWRAGRAQDQAEFELFFRQCPFGGAFALAAGLRDCVRFLRAFRLRDADVQFLASALPPDTDPAFFEHLRALDCSGVTVRALPEGSLAFPGVPLLQVSGPLLVVQLLETPLLCLVSYASLIATNAARLRLIAGPDKRLLEMGLRRAQGPDGGLTASTYSYLGGFDASSNVLAGQL 202          
BLAST of FC931231 vs. ExPASy Swiss-Prot
Match: PNCB_HUMAN (Nicotinate phosphoribosyltransferase OS=Homo sapiens GN=NAPRT1 PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 1.571e-57
Identity = 104/188 (55.32%), Postives = 140/188 (74.47%), Query Frame = 3
Query:  135 PLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVASKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFDATSNVAAGKV 698
            PLL DLYQ TMA  YW+AG+  + A F+L+FR+ PFGG + + AGL +C+RF+  F+L + ++ F+   LP   +  FF++LR ++CS+V V A+ EGS+ FP VPLL+V GP+ VVQLLETP + L++YASLV TNAAR R +A   K LLE GLRRAQGPDGG+ AS Y Y+GGFD++SNV AG++
Sbjct:   15 PLLTDLYQATMALGYWRAGRARDAAEFELFFRRCPFGGAFALAAGLRDCVRFLRAFRLRDADVQFLASVLPPDTDPAFFEHLRALDCSEVTVRALPEGSLAFPGVPLLQVSGPLLVVQLLETPLLCLVSYASLVATNAARLRLIAGPEKRLLEMGLRRAQGPDGGLTASTYSYLGGFDSSSNVLAGQL 202          
BLAST of FC931231 vs. ExPASy Swiss-Prot
Match: PNCB_RAT (Nicotinate phosphoribosyltransferase OS=Rattus norvegicus GN=Naprt1 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.268e-56
Identity = 104/191 (54.45%), Postives = 138/191 (72.25%), Query Frame = 3
Query:  126 MVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVASKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFDATSNVAAGKV 698
            +V PLL DLYQ TM   YW+AG+  E A F+L+FR  PFGG + + AGL++CIRF+  F+L + ++ F+   LP   +  FF++LR ++CS V V A+ EGS+ FP VPLL+V GP+ +VQLLETP + L++YASLV TNAAR R +A   K LLE GLRRAQGPDGG  AS Y Y+GGFD++SN  AG++
Sbjct:   12 VVRPLLTDLYQATMGLGYWRAGRACEEAEFELFFRHCPFGGSFALTAGLQDCIRFLRAFRLRDADVQFLASVLPPDTDPAFFEHLRALDCSRVSVRALPEGSLAFPGVPLLQVSGPLLLVQLLETPLLCLVSYASLVATNAARLRLIAGPDKRLLEMGLRRAQGPDGGFTASIYSYLGGFDSSSNTLAGQL 202          
BLAST of FC931231 vs. ExPASy Swiss-Prot
Match: PNCB_MOUSE (Nicotinate phosphoribosyltransferase OS=Mus musculus GN=Naprt1 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.268e-56
Identity = 104/191 (54.45%), Postives = 139/191 (72.77%), Query Frame = 3
Query:  126 MVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVASKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFDATSNVAAGKV 698
            +V PLL DLYQ TMA  YW+AG+  E A F+L+FR  PFGG + + AGL++C+RF+  F+L + ++ F+   LP   +  FF++LR ++CS V V A+ EGS+ FP VPLL+V GP+ +VQLLETP + L++YASLV TNAAR R +A   K LLE GLRRAQGPDGG  AS Y Y+GGFD++SN  AG++
Sbjct:   12 VVRPLLTDLYQATMALGYWRAGRACEAAEFELFFRHCPFGGSFALSAGLQDCMRFLRAFRLRDADVQFLASVLPPDTDPAFFEHLRALDCSGVTVRALPEGSLAFPGVPLLQVSGPLLLVQLLETPLLCLVSYASLVATNAARLRLIAGPDKKLLEMGLRRAQGPDGGFTASIYSYLGGFDSSSNTLAGQL 202          
BLAST of FC931231 vs. ExPASy Swiss-Prot
Match: PNCB_BACSU (Nicotinate phosphoribosyltransferase OS=Bacillus subtilis GN=pncB PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.291e-39
Identity = 82/188 (43.62%), Postives = 125/188 (66.49%), Query Frame = 3
Query:  138 LLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVASKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFDATSNVAAGKVF 701
            L  DLYQ  MA  YW+ G H+++A+F+L+FR+ PF   Y +FAGLE+ I ++ NFK T+ ++++++D L G  ED F +YLRG++ +   ++++ EG +VF   P++RVE P+   QL+ET  +N++NY +L+ T AAR + V    ++ LEFG RRA   D  +  ++   IGGF ATSNV AGK F
Sbjct:   13 LHTDLYQINMAETYWRDGIHEKKAIFELFFRRLPFENGYAVFAGLEKAIEYLENFKFTDSDLSYLQDEL-GYHED-FIEYLRGLSFTG-SLYSMKEGELVFNNEPIMRVEAPLVEAQLIETALLNIVNYQTLIATKAARIKGVIG-DEVALEFGTRRAHEMDAAMWGARAALIGGFSATSNVRAGKRF 196          
BLAST of FC931231 vs. ExPASy Swiss-Prot
Match: PNCB_MYCTU (Nicotinate phosphoribosyltransferase OS=Mycobacterium tuberculosis GN=Rv1330c PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.249e-14
Identity = 57/199 (28.64%), Postives = 90/199 (45.23%), Query Frame = 3
Query:   93 AGRSVSGPTNPMVTPLLNDLYQFTMAYAYWKAGKHDERAVFDLYFRKNPFGGEYTIFAGLEECIRFIANFKLTEEEITFVRDSLPGSCEDGFFDYLRGINCSDVEVHAITEGSVVFPKVPLLRVEGPVAVVQLLETPFVNLINYASLVTTNAARHRFVASKSKMLLEFGLRRAQGPDGGIGASKYCYIGGFDATSNVAA 689
            A R    P N     LL D Y+ TM  A  + G  +    F+++ R+ P G  Y + AG    +  +  F+   +    +   L    +     YLR       ++    EG + FP  P+L V G  A   LLET  +++ N+ + + + AAR    A+  + L+E G RR       + A++  YI GF A+SN+AA
Sbjct:    7 ARRREGEPDNQDPAGLLTDKYELTMLAAALRDGSANRPTTFEVFARRLPTGRRYGVVAGTGRLLEALPQFRFDADACELLAQFL----DPATVRYLREFRFRG-DIDGYAEGELYFPGSPVLSVRGSFAECVLLETLVLSIFNHDTAIASAAAR-MVSAAGGRPLIEMGSRRTH-ERAAVAAARAAYIAGFAASSNLAA 198          
The following BLAST results are available for this feature:
BLAST of FC931231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
PNCB_CAEEL1.674e-6761.46Nicotinate phosphoribosyltransferase OS=Caenorhabd... [more]
PNCB_DROME1.085e-6660.31Nicotinate phosphoribosyltransferase OS=Drosophila... [more]
PNCB_DICDI5.956e-6558.71Nicotinate phosphoribosyltransferase OS=Dictyostel... [more]
PNCB_DANRE8.049e-6255.07Nicotinate phosphoribosyltransferase OS=Danio reri... [more]
PNCB_BOVIN4.134e-5855.32Nicotinate phosphoribosyltransferase OS=Bos taurus... [more]
PNCB_HUMAN1.571e-5755.32Nicotinate phosphoribosyltransferase OS=Homo sapie... [more]
PNCB_RAT2.268e-5654.45Nicotinate phosphoribosyltransferase OS=Rattus nor... [more]
PNCB_MOUSE2.268e-5654.45Nicotinate phosphoribosyltransferase OS=Mus muscul... [more]
PNCB_BACSU3.291e-3943.62Nicotinate phosphoribosyltransferase OS=Bacillus s... [more]
PNCB_MYCTU6.249e-1428.64Nicotinate phosphoribosyltransferase OS=Mycobacter... [more]
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Properties
Property NameValue
Genbank descriptionC34102H10EF PostHarvP1 Citrus clementina cDNA clone C34102H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931231 ID=FC931231; Name=FC931231; organism=Citrus clementina; type=EST; length=703bp
GATCATACAATTCAAAAAACTTACTGAAAAAGAAACAATAAATTTGTGAA
AGAAAAATGGAGGGCAAAGCGAATGGACCGAGTGAAAACCAAGCGGGTCG
GTCCGTTTCTGGCCCGACTAACCCGATGGTTACGCCTCTGTTAAACGATC
TTTATCAGTTCACCATGGCTTATGCTTATTGGAAAGCTGGCAAGCATGAT
GAACGTGCTGTGTTTGATTTATATTTTCGAAAGAATCCGTTTGGTGGTGA
ATATACTATCTTTGCTGGTTTGGAAGAATGCATAAGGTTCATTGCTAACT
TCAAATTGACAGAGGAGGAGATCACTTTTGTCCGTGATAGCCTGCCTGGT
TCATGTGAGGATGGCTTCTTCGATTATCTTAGAGGAATCAACTGTTCTGA
TGTTGAAGTGCATGCTATTACAGAGGGATCAGTTGTTTTCCCAAAGGTAC
CCCTGCTGCGAGTTGAAGGGCCAGTTGCTGTGGTTCAATTGCTGGAAACT
CCATTTGTGAATCTTATTAATTATGCCTCATTAGTGACTACAAATGCTGC
AAGACATCGATTTGTTGCTAGCAAGTCAAAAATGTTACTCGAGTTTGGCC
TTCGACGGGCTCAGGGCCCTGATGGAGGAATAGGAGCATCAAAATACTGC
TACATTGGAGGATTTGATGCCACNAGCAATGTTGCTGCTGGGAAAGTATT
TGG
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