FC931236
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931236 vs. ExPASy Swiss-Prot
Match: Y615_SYNY3 (UPF0016 membrane protein sll0615 OS=Synechocystis sp. (strain PCC 6803) GN=sll0615 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.148e-28 Identity = 45/78 (57.69%), Postives = 55/78 (70.51%), Query Frame = 1 Query: 454 IFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKF-HTYGCYIGGLLFFAFPV 684 I +ESF LTF+AEWGDR+QIATIALA NA GV+ GA +GHTIC +AV+GG +A + IGGLLF+ F V Sbjct: 121 IVVESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAVIAVMGGKFVAGRISEKTVTLIGGLLFYLFAV 198 HSP 2 Score: 60.4622 bits (145), Expect = 1.148e-28 Identity = 35/95 (36.84%), Postives = 54/95 (56.84%), Query Frame = 3 Query: 84 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFWAAVTIHSLDVRSKIRSEE 368 AF A +I VSE+GD+TF IA ++AMR+P+ VL G + L MT+LS +G+I L +R + N A L+ F + + +++ EE Sbjct: 4 AFTAGLLLITVSELGDKTFFIAMILAMRYPRRWVLVGVVGGLAAMTILSVLMGQIFTFLPTR-YINYAEVALFLIFGTKLLWDARRIKATANLEE 97
BLAST of FC931236 vs. ExPASy Swiss-Prot
Match: TM165_RAT (Transmembrane protein 165 OS=Rattus norvegicus GN=Tmem165 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.326e-18 Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 451 PIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKFHTYG-CYIGGLLFFAFPVS 687 PIF+++ LTFLAEWGDRSQ+ TI LA ++ GVAVG T+GH +CT LAV+GG M+A K IGG++F AF S Sbjct: 234 PIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFS 313 HSP 2 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 3 Query: 63 SGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFF 311 + LG AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS G +I R +T +T L+A F Sbjct: 89 ANLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFG-YATTVIPRVYTYYVSTALFAIF 170
BLAST of FC931236 vs. ExPASy Swiss-Prot
Match: TM165_MOUSE (Transmembrane protein 165 OS=Mus musculus GN=Tmem165 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.326e-18 Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 451 PIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKFHTYG-CYIGGLLFFAFPVS 687 PIF+++ LTFLAEWGDRSQ+ TI LA ++ GVAVG T+GH +CT LAV+GG M+A K IGG++F AF S Sbjct: 234 PIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFS 313 HSP 2 Score: 74.3294 bits (181), Expect = 6.679e-13 Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 3 Query: 63 SGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFF 311 + LG AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS G +I R +T +T L+A F Sbjct: 89 TNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALALMTCLSVLFG-YATTVIPRVYTYYVSTALFAIF 170
BLAST of FC931236 vs. ExPASy Swiss-Prot
Match: TM165_HUMAN (Transmembrane protein 165 OS=Homo sapiens GN=TMEM165 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.326e-18 Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 1 Query: 451 PIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKFHTYG-CYIGGLLFFAFPVS 687 PIF+++ LTFLAEWGDRSQ+ TI LA ++ GVAVG T+GH +CT LAV+GG M+A K IGG++F AF S Sbjct: 235 PIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVTIIGGIVFLAFAFS 314 HSP 2 Score: 75.485 bits (184), Expect = 2.998e-13 Identity = 42/83 (50.60%), Postives = 58/83 (69.88%), Query Frame = 3 Query: 63 SGLGVFDAFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFF 311 + LG AF+A+ S+IIVSE+GD+TF IAA+MAMR+ + TVL+GA+ AL +MT LS G +I R +T +TVL+A F Sbjct: 89 TNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAGAMLALGLMTCLSVLFG-YATTVIPRVYTYYVSTVLFAIF 170
BLAST of FC931236 vs. ExPASy Swiss-Prot
Match: YD68_SCHPO (UPF0016 membrane protein C17G8.08c OS=Schizosaccharomyces pombe GN=SPAC17G8.08c PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.084e-18 Identity = 41/81 (50.62%), Postives = 59/81 (72.84%), Query Frame = 1 Query: 451 PIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKFHTYG-CYIGGLLFFAFPVSY 690 P+F+++F LTF++EWGDRSQIATIA+A N GV +GA +GH CT+LAV+ G +++K + +IGG+LF AF + Y Sbjct: 201 PLFIKAFALTFVSEWGDRSQIATIAMAASDNVYGVFMGANVGHACCTALAVISGKYISTKIKVHKVMFIGGILFIAFGLVY 281 HSP 2 Score: 68.1662 bits (165), Expect = 4.787e-11 Identity = 37/87 (42.53%), Postives = 53/87 (60.92%), Query Frame = 3 Query: 84 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFWAAVTIHSLDV 344 + I S SMI EIGD+TFI+AAL+A + + TV +G+ SALF+MT+L LG P L RK T+ VL+ F + + + +V Sbjct: 49 SLIFSISMIFGCEIGDKTFIVAALLAFENSRLTVFAGSYSALFIMTLLGVLLGHAAPLLFPRKLTDILGGVLFVIFGIKMLMEAKEV 135
BLAST of FC931236 vs. ExPASy Swiss-Prot
Match: YB37_YEAST (UPF0016 membrane protein YBR187W OS=Saccharomyces cerevisiae GN=YBR187W PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12 Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 451 PIFLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKFHTYGCYI-GGLLFFAFPVSY 690 P++++ F++ FL E GDRSQI+ IA+AT + V GA IGH IC+ LAVVGG +LA++ + LLFF F + Y Sbjct: 191 PVWVQIFLMVFLGELGDRSQISIIAMATDSDYWYVIAGAVIGHAICSGLAVVGGKLLATRISIRTITLASSLLFFIFALMY 271 HSP 2 Score: 71.2478 bits (173), Expect = 5.654e-12 Identity = 39/95 (41.05%), Postives = 59/95 (62.11%), Query Frame = 3 Query: 84 AFIASFSMIIVSEIGDETFIIAALMAMRHPKSTVLSGALSALFVMTVLSTGLGRIVPNLISRKHTNSAATVLYAFFWAAVTIHSLDVRSKIRSEE 368 +F+ S SMI +SEIGD+TF+IAALMAMRH + V S A ++L +MT+LS +G +S ++T A +L+ F +T+ L++ EE Sbjct: 41 SFLMSVSMIGLSEIGDKTFLIAALMAMRHKRVLVFSAAATSLAIMTILSGVVGHSAVAFLSERYTAFFAGILFLVFGYKLTMEGLEMSKDAGVEE 135
BLAST of FC931236 vs. ExPASy Swiss-Prot
Match: YLY5_SCHPO (UPF0016 membrane protein C186.05c OS=Schizosaccharomyces pombe GN=SPAC186.05c PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11 Identity = 31/79 (39.24%), Postives = 51/79 (64.56%), Query Frame = 1 Query: 457 FLESFILTFLAEWGDRSQIATIALATHKNAVGVAVGATIGHTICTSLAVVGGSMLASKFHTYG-CYIGGLLFFAFPVSY 690 F+++F L F++E GDRSQIATI ++ + + V +G IGH +CT +AV+ G +++K Y + GG++F F + Y Sbjct: 179 FIKAFALIFVSELGDRSQIATIVMSAKEKVLDVFIGVNIGHMLCTMVAVIVGRYISNKIEMYKVLFFGGIVFMIFGILY 257 The following BLAST results are available for this feature:
BLAST of FC931236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931236 ID=FC931236; Name=FC931236; organism=Citrus clementina; type=EST; length=691bpback to top |