FC931251

Overview
NameFC931251
Unique NameFC931251
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length757
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15293 contig Ccv1_Contig15293:1..757. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931251 vs. ExPASy Swiss-Prot
Match: Y1861_PYRAE (Putative ankyrin repeat protein PAE1861 OS=Pyrobaculum aerophilum GN=PAE1861 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.067e-13
Identity = 45/114 (39.47%), Postives = 66/114 (57.89%), Query Frame = 3
Query:  339 LHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNG 680
            LH+ AG   A +VK LLE+     V+  A++ +G+TPLHMA+++ C +  +LLL  G  +  K   G TPLH        ++D   +K LL Y AD +A DN G+TPL +  +G
Sbjct:  129 LHLVAG--DAGLVKLLLEYG----VDPNARDAHGKTPLHMASEHNCAQCVELLLKRGPDVNVKDGAGRTPLHY-------ADDVDCIKLLLRYGADLNAVDNMGRTPLHYAEDG 229          
BLAST of FC931251 vs. ExPASy Swiss-Prot
Match: ANK3_HUMAN (Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 3.899e-12
Identity = 52/160 (32.50%), Postives = 77/160 (48.12%), Query Frame = 3
Query:  234 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 713
            +H  A+SG     + L+++   +  E      QTPLH+SA   KA+IV+ LL+   +      A    G TPLH++A+ G  + A  LL HGA +      G TPLH++  Y            LL+ +A   A    G TPL H++    + K+  LLL
Sbjct:  470 LHMAARSGQAEVVRYLVQDGAQV--EAKAKDDQTPLHISARLGKADIVQQLLQQGASPN----AATTSGYTPLHLSAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYG----KLEVANLLLQKSASPDAAGKSGLTPL-HVAAHYDNQKVALLLL 618          

HSP 2 Score: 69.707 bits (169), Expect = 1.935e-11
Identity = 51/127 (40.16%), Postives = 65/127 (51.18%), Query Frame = 3
Query:  333 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 713
            TPLHV+A Y K E+   LL+   +     +A    G TPLH+AA     + A LLL  GA   A A NG TPLH++        D AT  TLLEY AD +A   +G   + HL+   G   +  LLL
Sbjct:  567 TPLHVAAKYGKLEVANLLLQKSASP----DAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAA--KKNQMDIAT--TLLEYGADANAVTRQGIASV-HLAAQEGHVDMVSLLL 684          

HSP 3 Score: 68.5514 bits (166), Expect = 4.310e-11
Identity = 48/129 (37.21%), Postives = 64/129 (49.61%), Query Frame = 3
Query:  333 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 719
            TP+HV+A      IV  L+    +        N+ GET LHMAA++G  E  + L+  GA +EAKA +  TPLH+S     R      V+ LL+  A  +A    G TPL HLS   G   +   LL H
Sbjct:  435 TPIHVAAFMGHVNIVSQLMHHGASPNTT----NVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISA----RLGKADIVQQLLQQGASPNAATTSGYTPL-HLSAREGHEDVAAFLLDH 554          
BLAST of FC931251 vs. ExPASy Swiss-Prot
Match: Y381_RICFE (Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis GN=RF_0381 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.092e-12
Identity = 44/145 (30.34%), Postives = 75/145 (51.72%), Query Frame = 3
Query:  234 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDH 668
            +H  A+SG+L     L+     +  + +  +  T LH +       +V  L+    +  +++ A+   GET LH A   G  +   LL+  GA + AK ++G+T LH    Y++ S++ A V  L+ Y AD +AK+N G+TPL +
Sbjct:  968 LHFAAESGNLNLVSLLIHNGTDINTKTDDGL--TALHYAVESGNLNLVSLLI----HKGIDVNAKTNSGETILHFAVDLGSLDLVSLLMVRGADVNAKTDDGLTALH----YAVESDNLALVSLLMVYGADVNAKNNSGETPLHY 1102          
BLAST of FC931251 vs. ExPASy Swiss-Prot
Match: TRPA1_RAT (Transient receptor potential cation channel subfamily A member 1 OS=Rattus norvegicus GN=Trpa1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.134e-11
Identity = 59/197 (29.95%), Postives = 99/197 (50.25%), Query Frame = 3
Query:  153 GIRRQLPQLGQMQKNQ----DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK-DNEGKTPLDHLSNGPGSAKLRELLLWHSEE 728
            G+R   P+  QMQ  +    D  +    P  +H   + G  ++   LLR N S+ ++      ++PLH +A Y +    + LL+   + ++ L   +++G TPLH+AAKNG ++  +LLL  GA      +NG T LH    ++       T+K +L+ N  C+ + D EG T L H +   G AK   +LL ++ +
Sbjct:  389 GLRNLRPEFLQMQHIKELVMDEDNDGCTP--LHYACRQGAPVSVNNLLRFNVSVHSKSKD--KKSPLHFAASYGRINTCQRLLQDISDTRL-LNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALF-LSDHNGWTALH----HASMGGYTQTMKVILDTNLKCTDRLDEEGNTAL-HFAAREGHAKAVAMLLSYNAD 574          
BLAST of FC931251 vs. ExPASy Swiss-Prot
Match: LCTA_LATTR (Alpha-latrocrustotoxin-Lt1a (Fragment) OS=Latrodectus tredecimguttatus PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.134e-11
Identity = 46/160 (28.75%), Postives = 82/160 (51.25%), Query Frame = 3
Query:  234 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 713
            +H  +  G+L   +    E    +N +  V   TPLH++  + K ++ +SLL+      +++  +     TPLH+AA  G ++  K +L  GA ++ +  NG T LHL    +I + +  T + L+   A+ +AK N+G TPL H +   G   + +LL+
Sbjct:  669 LHYASMLGNLEFVKYFTSEQGIDVNAKTKVKNWTPLHLAILFKKFDVAQSLLQVRN---IDISTRADQAITPLHLAAATGNSQIVKTILNSGAVVDQETANGFTALHL----AIMNPNTETPQFLIAKGANINAKTNDGSTPL-HFAAALGKTNIFQLLM 820          
BLAST of FC931251 vs. ExPASy Swiss-Prot
Match: V245_FOWPV (Putative ankyrin repeat protein FPV245 OS=Fowlpox virus GN=FPV245 PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.527e-11
Identity = 45/131 (34.35%), Postives = 68/131 (51.91%), Query Frame = 3
Query:  336 PLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWHSEE 728
            P+H++   N  EI+K LLE      V+    + YG +PLH AAK G     KL+L H   I  K NNG+TPLH ++ Y+       +   LL  N   +  D +G TPL +    P S  + ++LL+++ +
Sbjct:  160 PIHIATRSNSYEIIKLLLEKGAYANVK----DNYGNSPLHNAAKYGDYACIKLVLDHTNNISNKCNNGVTPLHNAILYN------RSAVELLINNRSINDTDVDGYTPLHYALQPPCSIDIIDILLYNNAD 280          
BLAST of FC931251 vs. ExPASy Swiss-Prot
Match: ANK1_HUMAN (Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.527e-11
Identity = 53/160 (33.12%), Postives = 77/160 (48.12%), Query Frame = 3
Query:  234 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 713
            +H  A+   +   + LL+   S   E   V   TPLH++A    AE+V  LL    N  +     N  G TPLH+ A+ G    A +L+ HG  ++A    G TPLH++  Y     +   VK LL++ AD +AK   G +PL H +   G   +  LLL
Sbjct:  606 LHIAAKQNQVEVARSLLQYGGSANAES--VQGVTPLHLAAQEGHAEMVALLLSKQANGNLG----NKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYG----NIKLVKFLLQHQADVNAKTKLGYSPL-HQAAQQGHTDIVTLLL 754          

HSP 2 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 46/110 (41.82%), Postives = 59/110 (53.64%), Query Frame = 3
Query:  333 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPL 662
            TPLHV++      IVK+LL+   +  V     N+  ETPLHMAA+ G  E AK LL + A + AKA +  TPLH +     R      VK LLE NA+ +     G TPL
Sbjct:  406 TPLHVASFMGHLPIVKNLLQRGASPNVS----NVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAA----RIGHTNMVKLLLENNANPNLATTAGHTPL 507          
BLAST of FC931251 vs. ExPASy Swiss-Prot
Match: ANK2_MOUSE (Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.300e-11
Identity = 55/176 (31.25%), Postives = 82/176 (46.59%), Query Frame = 3
Query:  201 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPS------LLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELL 710
            D + +   PA +H  A+  D  +   LL+ + +      ++  R      TPLH++A Y    +   LL       V+  A+N  G TPLH+A+K G     KLLL  G  I+AK  +G+TPLH +     RS     V+ LLE  A   A+   G +PL   + G     ++ LL
Sbjct:  186 DTKGKVRLPA-LHIAARKDDTKSAALLLQNDHNADVQSKMMVNRTTESGFTPLHIAAHYGNVNVATLLLN--RGAAVDFTARN--GITPLHVASKRGNTNMVKLLLDRGGQIDAKTRDGLTPLHCAA----RSGHDQVVELLLERKAPLLARTKNGLSPLHMAAQGDHVECVKHLL 352          
BLAST of FC931251 vs. ExPASy Swiss-Prot
Match: ANK2_HUMAN (Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 3.300e-11
Identity = 55/176 (31.25%), Postives = 82/176 (46.59%), Query Frame = 3
Query:  201 DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPS------LLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELL 710
            D + +   PA +H  A+  D  +   LL+ + +      ++  R      TPLH++A Y    +   LL       V+  A+N  G TPLH+A+K G     KLLL  G  I+AK  +G+TPLH +     RS     V+ LLE  A   A+   G +PL   + G     ++ LL
Sbjct:  186 DTKGKVRLPA-LHIAARKDDTKSAALLLQNDHNADVQSKMMVNRTTESGFTPLHIAAHYGNVNVATLLLN--RGAAVDFTARN--GITPLHVASKRGNTNMVKLLLDRGGQIDAKTRDGLTPLHCAA----RSGHDQVVELLLERGAPLLARTKNGLSPLHMAAQGDHVECVKHLL 352          
BLAST of FC931251 vs. ExPASy Swiss-Prot
Match: TRPA1_HUMAN (Transient receptor potential cation channel subfamily A member 1 OS=Homo sapiens GN=TRPA1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.310e-11
Identity = 58/197 (29.44%), Postives = 98/197 (49.75%), Query Frame = 3
Query:  153 GIRRQLPQLGQMQKNQ----DRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK-DNEGKTPLDHLSNGPGSAKLRELLLWHSEE 728
            G++   P+  QMQ+ +    D  +    P  +H   + G   +   LL  N S+ ++      ++PLH +A Y +    + LL+   + ++ L   +++G TPLH+AAKNG ++  +LLL  GA      +NG T LH    ++       T+K +L+ N  C+ + D +G T L H +   G AK   LLL H+ +
Sbjct:  388 GLKNLRPEFMQMQQIKELVMDEDNDGCTP--LHYACRQGGPGSVNNLLGFNVSIHSKSKD--KKSPLHFAASYGRINTCQRLLQDISDTRL-LNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALF-LSDHNGWTALH----HASMGGYTQTMKVILDTNLKCTDRLDEDGNTAL-HFAAREGHAKAVALLLSHNAD 573          
The following BLAST results are available for this feature:
BLAST of FC931251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
Y1861_PYRAE2.067e-1339.47Putative ankyrin repeat protein PAE1861 OS=Pyrobac... [more]
ANK3_HUMAN3.899e-1232.50Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3[more]
Y381_RICFE5.092e-1230.34Putative ankyrin repeat protein RF_0381 OS=Rickett... [more]
TRPA1_RAT1.134e-1129.95Transient receptor potential cation channel subfam... [more]
LCTA_LATTR1.134e-1128.75Alpha-latrocrustotoxin-Lt1a (Fragment) OS=Latrodec... [more]
V245_FOWPV2.527e-1134.35Putative ankyrin repeat protein FPV245 OS=Fowlpox ... [more]
ANK1_HUMAN2.527e-1133.13Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3[more]
ANK2_MOUSE3.300e-1131.25Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2[more]
ANK2_HUMAN3.300e-1131.25Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=3[more]
TRPA1_HUMAN4.310e-1129.44Transient receptor potential cation channel subfam... [more]

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Properties
Property NameValue
Genbank descriptionC34103B06EF PostHarvP1 Citrus clementina cDNA clone C34103B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931251 ID=FC931251; Name=FC931251; organism=Citrus clementina; type=EST; length=757bp
GAGGGGACAGTGAAGCAGCAGCAGTGTTAGAAGAATCGGGCGCAAGAGTC
GGAGGGTGGGGAATTAATTTCCTTAAGTGACCGCCAAAGACTCAACAAGA
AACAAAAAATTCTATCTTTATCTGAATCTCCATTTGGCTTTTAGATTAAG
GGGGGATTAGGCGCCAATTACCTCAGCTGGGGCAGATGCAGAAGAATCAA
GATCGACGGTCAAGATCTGCCAAGCCCGCCACCATTCATGGCTGCGCCCA
GTCTGGGGATCTTCTCGCCTTCCAGAGGCTACTTCGAGAGAACCCATCTC
TTCTCAATGAAAGAAATCCCGTTATGGCACAAACACCCCTTCATGTTTCC
GCTGGTTATAACAAGGCTGAAATAGTTAAATCTCTGCTTGAATGGCCAGG
AAACGATAAGGTTGAGTTGGAGGCCCAAAACATGTATGGAGAAACTCCAT
TGCACATGGCAGCGAAGAATGGATGTAATGAAGCTGCAAAGTTACTTCTT
GCTCATGGTGCTTTTATTGAAGCCAAAGCTAATAATGGGATGACACCATT
ACACCTTTCCGTCTGGTACTCTATTCGGTCTGAAGACTACGCAACTGTTA
AGACATTGCTTGAGTATAATGCTGACTGCAGTGCTAAGGACAATGAGGGC
AAGACTCCTCTAGATCATCTCTCAAATGGCCCAGGCAGTGCGAAGTTGCG
TGAACTATTACTCTGGCACAGTGAAGAGCAGCGGAAGAGAAGAGCACTTG
AAGCGTG
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