FC931253

Overview
NameFC931253
Unique NameFC931253
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10622 contig Ccv1_Contig10622:208..907. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.032e-29
Identity = 74/213 (34.74%), Postives = 109/213 (51.17%), Query Frame = 1
Query:   85 IVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGA-----YPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYAN---VSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHXAKELLTLDN 699
            IV     G D++D++E  +RGI VTN  +  ++  A                     R+G W   G      + LG  + GK +GI+GLG IG  +AKR   F   I Y SR +K  V     A    +  L  +SD +++   LT ET+H+IN++ +  + K  ++IN+ RG ++D   LV  L  G + GAGLDVFE+EP+  +EL  LDN
Sbjct:   70 IVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKEEVERELNAEFKPLEDLLRESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDN 282          
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.032e-29
Identity = 74/213 (34.74%), Postives = 110/213 (51.64%), Query Frame = 1
Query:   85 IVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGA-----YPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYAN---VSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHXAKELLTLDN 699
            IV     G D++D++E  +RGI VTN     ++  A                     R+G W   G      + LG  + GK +GI+G G IG  +AKR   F   I Y SR +KP V     A    +  L  +SD +++   L +ET+HMIN++ +  + +  ++INV RG +ID K L+  L  G + GAGLDV+E+EP+  +EL +LDN
Sbjct:   71 IVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAKRARGFDMRILYYSRTRKPEVEKELNAEFKPLDELLRESDFVVLAVPLNKETYHMINEERLKMMKRTAILINVARGKVIDTKALIKALKEGWIAGAGLDVYEEEPYYNEELFSLDN 283          
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.532e-28
Identity = 72/213 (33.80%), Postives = 111/213 (52.11%), Query Frame = 1
Query:   85 IVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGA-----YPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHXAKELLTLDN 699
            IV     G D++D++E  RRGI VTN  +  ++  A                     R+G W   G      + LG  + GK +GIVG G IG  VA+R   FG  I Y SR +KP         + ++  L  +SD +++   LT+ET +MIN++ +  + K  +++N+ RG ++D K L+  L  G + GAGLDV+E+EP+  +EL +L N
Sbjct:   70 IVANYAVGYDNIDVEEATRRGIYVTNTPDVLTDATADFAWTLLLATARRLIEADHFTRSGEWKRRGIAWHPRWFLGYDVYGKTIGIVGFGRIGQAVARRARGFGMRILYYSRSRKPEAEKELGAEFRSLEDLLRESDFVVLAVPLTKETQYMINEERLRLMKKTAILVNIARGKVVDTKALMKALKEGWIAGAGLDVYEEEPYYNEELFSLKN 282          
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.001e-28
Identity = 71/214 (33.18%), Postives = 112/214 (52.34%), Query Frame = 1
Query:   82 EIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGA--YPL---GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYAN---VSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHXAKELLTLDN 699
            +IV     G D++D++E  + G+ +TN  +  +   A                     R+G W   G   +PL   G  + G+ +GIVG G IG  +A+R   FG  I Y SR +KP V     A    +  L  +SD +++   LT+ET+HMIN++ +  +    +++N+ RG ++D + LV  L  G + GAGLDVFE+EP+  +EL +LDN
Sbjct:   69 KIVANYAVGYDNIDIEEATKMGVYITNTPDVLTNATADMAWVLLLATARRLIEADKFVRSGEWKKRGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIARRAKGFGMRILYNSRTRKPEVEKELGAEFMPLDELLKESDFVVLVVPLTKETYHMINEERLKLMKPTAILVNIARGKVVDTEALVKALREGWIAGAGLDVFEEEPYYHEELFSLDN 282          
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: GYAR_THEGJ (Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.212e-27
Identity = 73/213 (34.27%), Postives = 108/213 (50.70%), Query Frame = 1
Query:   85 IVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGA--YPL---GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPFYAN---VSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHXAKELLTLDN 699
            IV     G D+VD++E  RRGI VTN  +  +   A                     R+G W   G   +PL   G  + GK +GI+G G IG  VA+R   FG  I Y SR +KP       A    +  L  +SD +++   LT+ET+HMI +  +  +    +++N+ RG ++D + L+  L  G + GAGLDVFE+EP+  +EL +L N
Sbjct:   70 IVANYAVGYDNVDVEEATRRGIYVTNTPDVLTNATADFAWTLLLATARRLIEADSFTRSGEWKRKGIAWHPLMFLGHDVYGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPEAEEELKAEFKPLEELLKESDFVVLAVPLTKETYHMIGERELKLMKPTAILVNIARGKVVDTEALIKALKEGWIAGAGLDVFEEEPYYNEELFSLKN 282          
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.774e-27
Identity = 72/213 (33.80%), Postives = 107/213 (50.23%), Query Frame = 1
Query:   85 IVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPD-----HGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHXAKELLTLDN 699
            IV     G D++D++E  RRGI VTN  +  +   A                     R+G W       H  + LG  L GK +GIVG G IG  +A+R   F   I Y SR +K          Y  +  +  +SD +I+   LT+ET +MIN++ +  +    +++N+ RG ++D K L+  L  G + GAGLDVFE+EP+  +EL +LDN
Sbjct:   70 IVANYAVGYDNIDVEEATRRGIYVTNTPDVLTNATADHAFALLLATARHVVKGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTIGIVGFGRIGQAIARRAKGFNMRILYYSRTRKSQAEKELGAEYRPLEEVLKESDFVILAVPLTKETMYMINEERLKLMKPTAILVNIARGKVVDTKALIKALKEGWIAGAGLDVFEEEPYYNEELFSLDN 282          
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.929e-27
Identity = 74/214 (34.58%), Postives = 107/214 (50.00%), Query Frame = 1
Query:   82 EIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWP--DHGAYPL---GSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSRKKKPGVSYPF---YANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHXAKELLTLDN 699
            +I+     G D++D++E  +RGI VTN     ++  A                     R+G W   + G +PL   G  L GK +GIVG G IG  +AKR   FG  I Y SR +KP         Y +   L  +SD + +   LT+ET+HMI +  +  +    ++IN  RGA++D   L+  L  G + GAGLDVFE+EP+  +EL  L N
Sbjct:   69 KIIAQYAVGYDNIDIEEATKRGIYVTNTPGVLTDATADLAFALLLAVARRIVEADAFVRSGEWKKSEVGWHPLMFLGYGLKGKTLGIVGFGRIGQALAKRAKGFGMKIIYYSRTRKPEAEEEIGAEYVDFETLLKESDFISLHVPLTKETYHMIGEKELKLMKPNAILINTSRGAVVDTNALIKALKEGWIAGAGLDVFEEEPYYNEELFKLKN 282          
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: GYAR_KORCO (Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8) GN=gyaR PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.531e-23
Identity = 72/214 (33.64%), Postives = 105/214 (49.07%), Query Frame = 1
Query:   85 IVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPD--HGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIAYTSR------KKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHXAKE-LLTLDN 699
            IV     G D++D++E  +RGI VTN     +E  A                     R G W    H    LG  + G+ +GIVG+G IG+ VA+R   FG  I Y         +K+ GV Y     +  L  +SD + +   LTEET+HMI ++ +  + +  +++N  RG ++D+K L   L  G + GAGLDVFE EP    + LL L+N
Sbjct:   70 IVAQYAVGYDNIDVKEATKRGIYVTNTPGVLTETTADFAFALLMAAARRVVEADRYVREGKWKVAWHPMMMLGYDVYGRTLGIVGMGRIGAAVARRAKGFGMRILYYDSIRREDFEKELGVEY---VPLEKLLEESDFVSLHVPLTEETYHMIGEEQLRRMKRTAILVNTSRGKVVDQKALYKALKEGWIAGAGLDVFEQEPIPPDDPLLKLEN 280          
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: SERA_METJA (D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii GN=serA PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.641e-22
Identity = 65/210 (30.95%), Postives = 104/210 (49.52%), Query Frame = 1
Query:   82 EIVVGSTAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGAYPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCSIA----YTSRKKKPGVSYPFYANVSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEPHXAKELLTLDN 699
            +++  +  G+D++D++    +GI+V NA +A S   A                     + G W D   +  G  L GK +G++GLG IG +V KR   FG +I     Y  ++    +      +++ L   +D + +   LT +T H+I ++ +  + K  +I+N  RG LIDEK L   L  G++  A LDVFE+EP     LLTLDN
Sbjct:   65 KVIGRAGVGVDNIDVEAATEKGIIVVNAPDASSISVAELTMGLMLAAARNIPQATASLKRGEW-DRKRFK-GIELYGKTLGVIGLGRIGQQVVKRAKAFGMNIIGYDPYIPKEVAESMGVELVDDINELCKRADFITLHVPLTPKTRHIIGREQIALMKKNAIIVNCARGGLIDEKALYEALKEGKIRAAALDVFEEEPPKDNPLLTLDN 272          
BLAST of FC931253 vs. ExPASy Swiss-Prot
Match: GRHPR_MOUSE (Glyoxylate reductase/hydroxypyruvate reductase OS=Mus musculus GN=Grhpr PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.143e-22
Identity = 67/206 (32.52%), Postives = 102/206 (49.51%), Query Frame = 1
Query:  100 TAGIDHVDLQECRRRGILVTNAGNAFSEDGAXXXXXXXXXXXXXXXXXXXXXRNGLWPDHGA-YPLGSTLGGKRVGIVGLGSIGSEVAKRLVPFGCS-IAYTSRKKKPGVSYPFYAN---VSGLAADSDVLIVCCALTEETHHMINKDVMTALGKEGVIINVGRGALIDEKELVHFLVRGELGGAGLDVFEDEP-HXAKELLTLDN 699
            + G+DH+ L E ++RGI V       ++  A                     +NG W      +  G  L    VGIVGLG IG  +A+RL PFG     YT R+ +P  +  F A    ++ LAA+SD ++V C+LT +T  + +KD    +    + IN+ RG ++++++L   L  G++  AGLDV   EP   +  LLTL N
Sbjct:   82 SVGVDHLALDEIKKRGIRVGYTPGVLTDATAELAVSLLLTTCRRLPEAIEEVKNGGWSSWSPLWMCGYGLSQSTVGIVGLGRIGQAIARRLKPFGVQRFLYTGRQPRPQEAAEFQAEFVPIAQLAAESDFIVVSCSLTPDTMGLCSKDFFQKMKNTAIFINISRGDVVNQEDLYQALASGQIAAAGLDVTTPEPLPPSHPLLTLKN 287          
The following BLAST results are available for this feature:
BLAST of FC931253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
GYAR_PYRHO4.032e-2934.74Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]
GYAR_PYRAB4.032e-2934.74Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
GYAR_PYRKO1.532e-2833.80Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_THEON2.001e-2833.18Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_THEGJ2.212e-2734.27Glyoxylate reductase OS=Thermococcus gammatolerans... [more]
GYAR_PYRFU3.774e-2733.80Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
GYAR_THELI4.929e-2734.58Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
GYAR_KORCO2.531e-2333.64Glyoxylate reductase OS=Korarchaeum cryptofilum (s... [more]
SERA_METJA1.641e-2230.95D-3-phosphoglycerate dehydrogenase OS=Methanocaldo... [more]
GRHPR_MOUSE2.143e-2232.52Glyoxylate reductase/hydroxypyruvate reductase OS=... [more]

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Properties
Property NameValue
Genbank descriptionC34103B08EF PostHarvP1 Citrus clementina cDNA clone C34103B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931253 ID=FC931253; Name=FC931253; organism=Citrus clementina; type=EST; length=700bp
CACGCCAGCTCCGTACGCGCCATTCTCTGCTTGGGCCCCTCTCCCCTCAC
CTCCGACACCCTCTCCCTCCTCCCGGCGTTGGAAATCGTCGTGGGGTCCA
CCGCAGGCATCGACCATGTTGACCTGCAGGAGTGCCGCCGACGCGGCATT
CTTGTGACTAATGCTGGTAACGCCTTCTCTGAGGACGGTGCTGATTATGT
GGTCGGTTTGTTGGTTGATGTTCTCAGGAGGGTTTCCAGCAGTGATCGGT
TTGTTCGGAACGGGTTGTGGCCCGATCATGGGGCCTACCCACTTGGGTCA
ACGTTGGGAGGAAAGCGAGTTGGGATTGTGGGGTTGGGTAGCATAGGCTC
TGAAGTTGCAAAAAGGCTTGTGCCCTTCGGCTGTAGCATTGCTTACACAT
CAAGAAAGAAAAAGCCAGGTGTTTCGTATCCTTTTTATGCAAATGTTTCT
GGCCTTGCTGCTGATAGTGATGTCCTCATTGTGTGTTGTGCTCTGACCGA
GGAAACTCACCACATGATTAACAAGGATGTCATGACAGCACTGGGCAAGG
AAGGGGTGATAATAAATGTTGGGCGCGGTGCTCTTATTGATGAGAAGGAA
CTGGTTCACTTCTTGGTGCGGGGGGAGCTTGGTGGAGCTGGTCTTGATGT
GTTTGAGGACGAGCCTCATNGTGCCAAGGAGCTGCTTACATTGGATAATG
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