FC931264

Overview
NameFC931264
Unique NameFC931264
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length724
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:261..985. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_CUCSA (Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis sativus GN=PCK PE=2 SV=1)

HSP 1 Score: 417.542 bits (1072), Expect = 3.479e-116
Identity = 198/225 (88.00%), Postives = 206/225 (91.56%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            LFSLMHYLMP RQILSLHSGCNMGK+GDVA               DHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLEN+VFDEHTREVDY +KSVTENTRAAYPIEYIPNAKIPCVGPHPKN+ILLACDAFGVLPPVSKLSL QTMYHFISGYTALVAGTEEG KEP+ATFSACFGAAFIMLHP++YAAMLAEKM+KHGATGWLV
Sbjct:  335 LFSLMHYLMPMRQILSLHSGCNMGKNGDVALFFGLSGTGKTTLSTDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENVVFDEHTREVDYSEKSVTENTRAAYPIEYIPNAKIPCVGPHPKNVILLACDAFGVLPPVSKLSLPQTMYHFISGYTALVAGTEEGVKEPQATFSACFGAAFIMLHPSRYAAMLAEKMKKHGATGWLV 559          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_ARATH (Phosphoenolpyruvate carboxykinase [ATP] OS=Arabidopsis thaliana GN=PCKA PE=1 SV=1)

HSP 1 Score: 405.601 bits (1041), Expect = 1.368e-112
Identity = 191/225 (84.89%), Postives = 202/225 (89.78%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            LFS+MHYLMPKR+ILSLHSGCNMGKDGDVA               DHNRYLIGDDEHCW++ GVSNIEGGCYAKC+DLSREKEPDIWNAIKFGTVLEN+VFDEHTREVDY DKSVTENTRAAYPIE+IPNAKIPCVGPHP N+ILLACDAFGVLPPVSKL+L QTMYHFISGYTALVAGTE+G KEP ATFSACFGAAFIMLHPTKYAAMLAEKM+  GATGWLV
Sbjct:  336 LFSVMHYLMPKRRILSLHSGCNMGKDGDVALFFGLSGTGKTTLSTDHNRYLIGDDEHCWTETGVSNIEGGCYAKCVDLSREKEPDIWNAIKFGTVLENVVFDEHTREVDYSDKSVTENTRAAYPIEFIPNAKIPCVGPHPTNVILLACDAFGVLPPVSKLNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMKSQGATGWLV 560          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_MAIZE (Phosphoenolpyruvate carboxykinase [ATP] OS=Zea mays PE=2 SV=1)

HSP 1 Score: 401.749 bits (1031), Expect = 1.976e-111
Identity = 192/225 (85.33%), Postives = 200/225 (88.89%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            LF +MHYLMPKR ILSLHSGCNMGKDGDVA               DHN  LIGDDEHCWSDNGVSNIEGGCYAKCIDL++EKEPDIWNAIKFGTVLEN+VFDEHTREVDY D SVTENTRAAYPIEYIP AKIPCVGPHPKN+ILLACDAFGVLPPVSKL L QTMYHFISGYTALVAGTE+G KEP+ATFSACFGAAFIMLHPTKYAAMLAEKMQK+GATGWLV
Sbjct:  331 LFGVMHYLMPKRGILSLHSGCNMGKDGDVALFFGLSGTGKTTLSTDHNGLLIGDDEHCWSDNGVSNIEGGCYAKCIDLAQEKEPDIWNAIKFGTVLENVVFDEHTREVDYADYSVTENTRAAYPIEYIPIAKIPCVGPHPKNVILLACDAFGVLPPVSKLILAQTMYHFISGYTALVAGTEDGIKEPQATFSACFGAAFIMLHPTKYAAMLAEKMQKYGATGWLV 555          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA2_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Urochloa panicoides GN=PCK2 PE=2 SV=1)

HSP 1 Score: 400.208 bits (1027), Expect = 5.748e-111
Identity = 188/225 (83.56%), Postives = 201/225 (89.33%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            LF +MHYLMPKR ILSLHSGCNMGK+GDVA               DHNR LIGDDEHCWSDNGVSNIEGGCYAKCIDLS+EKEPDIWNAIKFGTVLEN+VF+E TREVDY DKS+TENTRAAYPIE+IPNAKIPCVGPHPKN+ILLACDA+GVLPPVSKL+L QTMYHFISGYTA+VAGTE+G KEP ATFSACFGAAFIM HPTKYAAMLAEKMQK+GATGWLV
Sbjct:  291 LFGVMHYLMPKRGILSLHSGCNMGKEGDVALFFGLSGTGKTTLSTDHNRLLIGDDEHCWSDNGVSNIEGGCYAKCIDLSQEKEPDIWNAIKFGTVLENVVFNERTREVDYADKSITENTRAAYPIEFIPNAKIPCVGPHPKNVILLACDAYGVLPPVSKLNLAQTMYHFISGYTAIVAGTEDGVKEPTATFSACFGAAFIMYHPTKYAAMLAEKMQKYGATGWLV 515          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA1_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Urochloa panicoides GN=PCK1 PE=1 SV=1)

HSP 1 Score: 396.356 bits (1017), Expect = 8.300e-110
Identity = 186/225 (82.67%), Postives = 199/225 (88.44%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            LF +MHYLMPKR ILSLHSGCNMGK+GDVA               DHNR LIGDDEHCWSDNGVSNIEGGCYAKCIDLS+EKEPDIWNAI FGTVLEN+VF+E TREVDY DKS+TENTRAAYPIE+IPNAKIPCVGPHPKN+ILLACDA+GVLPPVSKL+L QTMYHFISGYTA+VAGTE+G KEP ATFSACFGAAFIM HPTKYAAMLAEKMQK+G TGWLV
Sbjct:  289 LFGVMHYLMPKRGILSLHSGCNMGKEGDVALFFGLSGTGKTTLSTDHNRLLIGDDEHCWSDNGVSNIEGGCYAKCIDLSKEKEPDIWNAITFGTVLENVVFNERTREVDYADKSITENTRAAYPIEFIPNAKIPCVGPHPKNVILLACDAYGVLPPVSKLNLAQTMYHFISGYTAIVAGTEDGVKEPTATFSACFGAAFIMYHPTKYAAMLAEKMQKYGRTGWLV 513          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_CANGA (Phosphoenolpyruvate carboxykinase [ATP] OS=Candida glabrata GN=PCK1 PE=3 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.130e-81
Identity = 143/228 (62.72%), Postives = 174/228 (76.32%), Query Frame = 3
Query:    3 LFSLMHYLMP-KRQILSLHSGCNMG-KDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGP-HPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F++M YLMP    +L+LHS CN G K+GDV                D +R LIGDDEHCWSD GV NIEGGCYAKCI+LSREKEP+I++AI+FG+VLEN+++D  + EVDY D S+TENTR AYPI++IP+AKIPC+ P HPKNIILL CDA GVLPPVSKL+ EQ MYHFISGYT+ +AGTE+G  EP  TFS+CFG  F+ LHP +YA MLAEKM +H A  WL+
Sbjct:  211 IFTVMFYLMPVHHNVLTLHSSCNQGIKNGDVTLFFGLSGTGKTTLSADPHRLLIGDDEHCWSDEGVFNIEGGCYAKCINLSREKEPEIFDAIRFGSVLENVIYDSESHEVDYDDSSITENTRCAYPIDFIPSAKIPCLAPAHPKNIILLTCDASGVLPPVSKLTPEQVMYHFISGYTSKMAGTEQGVTEPEPTFSSCFGQPFLSLHPMRYATMLAEKMHEHSANAWLI 438          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_KLULA (Phosphoenolpyruvate carboxykinase [ATP] OS=Kluyveromyces lactis GN=PCK1 PE=3 SV=2)

HSP 1 Score: 300.442 bits (768), Expect = 6.198e-81
Identity = 144/228 (63.16%), Postives = 173/228 (75.88%), Query Frame = 3
Query:    3 LFSLMHYLMP-KRQILSLHSGCNMG-KDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGP-HPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F++M YLMP    +L+LHS  N G +D DV                D +R LIGDDEHCWSD+GV NIEGGCYAKC+ LS EKEP+I+NAIKFG+VLENI++D +TREVDY D ++TENTR AYPIEYIP+AKIPC+   HPKNI+LL CDA GVLPPVSKL+ +Q MYHFISGYT+ +AGTE+G  EP ATFS+CFG  F+ LHP KYA MLAEKM +H A  WL+
Sbjct:  209 IFTVMFYLMPVNHNVLTLHSSANQGIQDNDVTLFFGLSGTGKTTLSADPHRLLIGDDEHCWSDHGVFNIEGGCYAKCLGLSAEKEPEIFNAIKFGSVLENIIYDPNTREVDYEDSTITENTRCAYPIEYIPSAKIPCLADHHPKNIVLLTCDASGVLPPVSKLTPDQVMYHFISGYTSKMAGTEQGVTEPEATFSSCFGQPFLSLHPMKYATMLAEKMAEHNANAWLI 436          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA2_SALRD (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Salinibacter ruber (strain DSM 13855) GN=pckA2 PE=3 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.381e-80
Identity = 142/225 (63.11%), Postives = 172/225 (76.44%), Query Frame = 3
Query:    3 LFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGPHPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F++MHYLMPK+ +LS+H   N G +GDV+               D NR LIGDDEHCWSD+GV NIEGGCYAK + LS E+EP+I+NAI++GTVLEN+V+DE TR VDY D S+T+NTRA+YP++YI  AKIP +G HP NII L  DAFGV+PPVSKL+ EQ MYHFISGYTA VAGTE G  EP+ATFSACFGAAF++  P KYA MLAEK++ H A  WLV
Sbjct:  199 VFTVMHYLMPKKDVLSMHCSANEGDEGDVSLFFGLSGTGKTTLSADPNRKLIGDDEHCWSDDGVFNIEGGCYAKAVGLSEEEEPEIYNAIRYGTVLENMVYDEDTRAVDYDDTSITQNTRASYPLDYIDRAKIPGMGGHPDNIIFLTYDAFGVMPPVSKLTPEQAMYHFISGYTAKVAGTEVGVDEPQATFSACFGAAFLVWPPDKYAEMLAEKIRAHDAEAWLV 423          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_NEUCR (Phosphoenolpyruvate carboxykinase [ATP] OS=Neurospora crassa GN=pck-1 PE=3 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 5.247e-80
Identity = 145/227 (63.88%), Postives = 170/227 (74.89%), Query Frame = 3
Query:    3 LFSLMHYLMP-KRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGP-HPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F++M Y  P K  IL+LHS  N GKDGDV                D NR LIGDDEHCWSD GV NIEGGCYAK I LS EKEPDI+NAI++G+VLEN+VF+  TREVDY D ++TENTR AYPIEYIPNAKIPC+ P HPKNIILL CDA GVLPP+SKL   QTM+HFISGYT+ +AGTE+G  EP+ATFS+CF   F+ LHP +YA MLAEK++ H A  WL+
Sbjct:  229 IFTVMFYEGPVKHNILTLHSSANEGKDGDVTLFFGLSGTGKTTLSADPNRRLIGDDEHCWSDRGVFNIEGGCYAKTIGLSAEKEPDIFNAIRYGSVLENVVFNPETREVDYGDATLTENTRCAYPIEYIPNAKIPCLSPNHPKNIILLTCDARGVLPPISKLDSAQTMFHFISGYTSKMAGTEDGILEPQATFSSCFAQPFLALHPMRYAKMLAEKIENHNANAWLL 455          
BLAST of FC931264 vs. ExPASy Swiss-Prot
Match: PCKA_ASHGO (Phosphoenolpyruvate carboxykinase [ATP] OS=Ashbya gossypii GN=PCK1 PE=3 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 2.604e-79
Identity = 141/227 (62.11%), Postives = 169/227 (74.45%), Query Frame = 3
Query:    3 LFSLMHYLMP-KRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYIPNAKIPCVGP-HPKNIILLACDAFGVLPPVSKLSLEQTMYHFISGYTALVAGTEEGAKEPRATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLV 677
            +F++M YLMP    +L+LHS  N G + DV                D +R LIGDDEHCWSD GV NIEGGCYAKCI LS EKEP+I+NAIK+G+VLEN+V+D  TR VDY D S+TENTR AYPIEYIP+A+IPC+   HP NI+LL CDA GVLPPVS+L+ EQ MYHFISGYT+ +AGTE+G  EP ATFS+CFG  F+ LHP KYA MLAEKM +H A+ WL+
Sbjct:  209 IFTVMFYLMPINHNVLTLHSSANQGPNNDVTLFFGLSGTGKTTLSADQHRKLIGDDEHCWSDYGVFNIEGGCYAKCIGLSGEKEPEIFNAIKYGSVLENVVYDPVTRVVDYEDSSITENTRCAYPIEYIPSAQIPCLSENHPSNIVLLTCDASGVLPPVSRLTPEQVMYHFISGYTSKMAGTEQGVTEPEATFSSCFGQPFLALHPMKYATMLAEKMSQHNASAWLI 435          
The following BLAST results are available for this feature:
BLAST of FC931264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_CUCSA3.479e-11688.00Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis... [more]
PCKA_ARATH1.368e-11284.89Phosphoenolpyruvate carboxykinase [ATP] OS=Arabido... [more]
PCKA_MAIZE1.976e-11185.33Phosphoenolpyruvate carboxykinase [ATP] OS=Zea may... [more]
PCKA2_UROPA5.748e-11183.56Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Uroch... [more]
PCKA1_UROPA8.300e-11082.67Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Uroch... [more]
PCKA_CANGA2.130e-8162.72Phosphoenolpyruvate carboxykinase [ATP] OS=Candida... [more]
PCKA_KLULA6.198e-8163.16Phosphoenolpyruvate carboxykinase [ATP] OS=Kluyver... [more]
PCKA2_SALRD1.381e-8063.11Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Salin... [more]
PCKA_NEUCR5.247e-8063.88Phosphoenolpyruvate carboxykinase [ATP] OS=Neurosp... [more]
PCKA_ASHGO2.604e-7962.11Phosphoenolpyruvate carboxykinase [ATP] OS=Ashbya ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34103C07EF PostHarvP1 Citrus clementina cDNA clone C34103C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931264 ID=FC931264; Name=FC931264; organism=Citrus clementina; type=EST; length=724bp
GTCTATTCAGCTTAATGCATTACCTAATGCCTAAACGTCAAATCCTCTCC
CTCCACTCTGGCTGCAATATGGGAAAAGATGGGGATGTTGCCCTTTTCTT
CGGACTATCCGGTACTGGGAAGACAACTCTGTCTACTGATCATAACCGGT
ACTTAATTGGAGATGATGAGCACTGCTGGAGTGATAATGGAGTATCAAAC
ATTGAAGGCGGGTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGA
GCCTGATATCTGGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTG
TGTTTGATGAGCATACACGAGAAGTGGACTACTTGGACAAATCTGTCACG
GAGAACACTCGTGCCGCGTATCCCATAGAGTATATCCCAAATGCAAAGAT
ACCTTGTGTTGGCCCTCATCCAAAGAATATAATCCTTTTGGCTTGTGATG
CATTTGGTGTACTCCCACCTGTGAGCAAGTTGAGCTTGGAACAGACCATG
TACCACTTCATCAGTGGCTACACTGCTCTGGTTGCTGGAACAGAGGAAGG
TGCGAAGGAGCCACGGGCAACATTCTCAGCCTGTTTTGGTGCCGCATTTA
TAATGCTACACCCTACAAAGTATGCTGCCATGCTGGCTGAAAAAATGCAG
AAGCATGGGGCTACTGGATGGTTGGTTACACTGGCTGGTCAGGTGGAAGC
TATGGGTCNAGAATCGTATTAATT
back to top