FC931271

Overview
NameFC931271
Unique NameFC931271
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15265 contig Ccv1_Contig15265:627..1332. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 421.009 bits (1081), Expect = 3.060e-117
Identity = 205/228 (89.91%), Postives = 214/228 (93.86%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSV+VD+YGTGKIPDKEILKIVKENFDFRPGMI+INLDLKRGGN RFLKTAAYGHFGRDDPD
Sbjct:  150 ARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVYVDTYGTGKIPDKEILKIVKENFDFRPGMITINLDLKRGGNSRFLKTAAYGHFGRDDPD 377
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK2_VITVI (S-adenosylmethionine synthetase 2 OS=Vitis vinifera GN=METK2 PE=3 SV=1)

HSP 1 Score: 418.698 bits (1075), Expect = 1.518e-116
Identity = 203/228 (89.04%), Postives = 214/228 (93.86%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTCPWLRPDGKTQVTVEY+N+ GARVP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPD+EILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD
Sbjct:  150 ARLTEVRKNGTCPWLRPDGKTQVTVEYHNDGGARVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 377
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK_LITCN (S-adenosylmethionine synthetase OS=Litchi chinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 417.927 bits (1073), Expect = 2.590e-116
Identity = 205/228 (89.91%), Postives = 212/228 (92.98%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTC WLRPDGKTQVTVEYYN NGA VPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPD+EILKIVKENFDFRPGMIS+NLDLKRGGNGRFLKTAAYGHFGR+DPD
Sbjct:  150 ARLTEVRKNGTCAWLRPDGKTQVTVEYYNGNGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILKIVKENFDFRPGMISVNLDLKRGGNGRFLKTAAYGHFGREDPD 377
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 417.542 bits (1072), Expect = 3.383e-116
Identity = 202/228 (88.60%), Postives = 213/228 (93.42%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTCPWLRPDGKTQVTVEYYN+NGA VP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPV+P+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKENFDFRPGMI+INLDLKRGGN RFLKTAAYGHFGR+DPD
Sbjct:  150 ARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPD 377
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK1_ELAUM (S-adenosylmethionine synthetase 1 OS=Elaeagnus umbellata GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 417.542 bits (1072), Expect = 3.383e-116
Identity = 203/228 (89.04%), Postives = 212/228 (92.98%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTCPWLRPDGKTQVTVEYYNENGA VPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRC+VQVSYAIGVPEPLSVFVDSYGTG+IPDKEIL IVKENFDFRPGMI+INLDLKRGGNGRFLKTA YGHFGRDDPD
Sbjct:  150 ARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGQIPDKEILNIVKENFDFRPGMITINLDLKRGGNGRFLKTAGYGHFGRDDPD 377
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 417.157 bits (1071), Expect = 4.418e-116
Identity = 204/228 (89.47%), Postives = 213/228 (93.42%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTC WLRPDGKTQVTVEY+NENGA VP+RVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMI+INLDLKRGGNGRFLKTAAYGHFGRDDPD
Sbjct:  150 ARLTEVRKNGTCSWLRPDGKTQVTVEYHNENGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDPD 377
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 416.772 bits (1070), Expect = 5.770e-116
Identity = 202/228 (88.60%), Postives = 214/228 (93.86%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTCPWLRPDGKTQVTVEYYNENGA VPVRVHTV+ISTQHDETVTND+IAADLK+HVIKPVIP+KYLD++TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKENFDFRPGMI+INLDLKRGG+GRFLKTAAYGHFGRDDPD
Sbjct:  150 ARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVVISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGSGRFLKTAAYGHFGRDDPD 377
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 415.616 bits (1067), Expect = 1.285e-115
Identity = 202/228 (88.60%), Postives = 212/228 (92.98%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTCPWLRPDGKTQVTVEYYNE GA VP+RVHT+LISTQHDETVTNDEIAADLK+HVIKPVIPDKYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGMI+INLDLKRGGN RFLKTAAYGHFGRDDPD
Sbjct:  150 ARLTEVRKNGTCPWLRPDGKTQVTVEYYNEKGATVPIRVHTLLISTQHDETVTNDEIAADLKEHVIKPVIPDKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKESFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGRDDPD 377
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK3_POPTR (S-adenosylmethionine synthetase 3 OS=Populus trichocarpa GN=METK3 PE=2 SV=1)

HSP 1 Score: 415.616 bits (1067), Expect = 1.285e-115
Identity = 204/228 (89.47%), Postives = 212/228 (92.98%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            ++LTEVRKNGTC WLRPDGKTQVTVEYYNENGA VPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL+IVKE+FDFRPGMISINLDLKRGGN RFLKTAAYGHFGRDDPD
Sbjct:  151 ARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKESFDFRPGMISINLDLKRGGNSRFLKTAAYGHFGRDDPD 378
[Close]
BLAST of FC931271 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 415.616 bits (1067), Expect = 1.285e-115
Identity = 205/228 (89.91%), Postives = 212/228 (92.98%), Query Frame = 2 
Query:   23 SKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGARVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPDKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDPD 706
            +KLTEVRKNGTC WLRPDGKTQVTVEY+NENGA VPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIP+KYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEIL+IVKE+FDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDD D
Sbjct:  150 AKLTEVRKNGTCAWLRPDGKTQVTVEYFNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILEIVKESFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDAD 377
The following BLAST results are available for this feature:
BLAST of FC931271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CARPA3.060e-11789.91S-adenosylmethionine synthetase OS=Carica papaya G... [more]
METK2_VITVI1.518e-11689.04S-adenosylmethionine synthetase 2 OS=Vitis vinifer... [more]
METK_LITCN2.590e-11689.91S-adenosylmethionine synthetase OS=Litchi chinensi... [more]
METK2_CATRO3.383e-11688.60S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK1_ELAUM3.383e-11689.04S-adenosylmethionine synthetase 1 OS=Elaeagnus umb... [more]
METK5_VITVI4.418e-11689.47S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]
METK1_CATRO5.770e-11688.60S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]
METK_CAMSI1.285e-11588.60S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK3_POPTR1.285e-11589.47S-adenosylmethionine synthetase 3 OS=Populus trich... [more]
METK2_BRAJU1.285e-11589.91S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]

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Properties
Property NameValue
Genbank descriptionC34103D02EF PostHarvP1 Citrus clementina cDNA clone C34103D02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931271 ID=FC931271; Name=FC931271; organism=Citrus clementina; type=EST; length=706bp
CATGTGCTTGCAACAAGCTTGGTCTAAGCTTACAGAAGTGAGGAAGAATG
GGACCTGTCCATGGCTGAGGCCAGATGGCAAAACACAAGTCACTGTTGAG
TATTACAATGAGAATGGCGCCAGGGTTCCTGTTCGTGTCCATACTGTGCT
TATCTCAACTCAGCACGATGAGACTGTAACTAATGATGAGATTGCTGCAG
ATCTCAAGCAACATGTGATCAAGCCCGTGATTCCTGACAAGTACTTGGAT
GACAAAACTATTTTCCATCTTAACCCATCTGGCCGTTTTGTTATTGGTGG
CCCTCACGGTGATGCTGGGCTCACTGGCCGGAAGATTATTATTGATACTT
ATGGTGGCTGGGGGGCACACGGCGGTGGGGCTTTCTCAGGGAAAGATCCT
ACCAAGGTTGATAGAAGCGGTGCTTACATTGTACGGCAAGCTGCTAAGAG
TATTGTGGCAAGTGGGCTTGCCAGGAGATGCATTGTTCAGGTTTCTTACG
CTATTGGTGTGCCCGAGCCTTTGTCAGTTTTTGTTGATAGTTATGGGACT
GGGAAGATCCCTGACAAGGAAATTTTGAAGATTGTGAAGGAGAATTTTGA
TTTTAGGCCTGGGATGATTTCTATTAATCTTGATCTCAAGAGGGGTGGCA
ACGGCAGGTTCTTGAAGACTGCCGCTTATGGGCACTTTGGCAGAGATGAT
CCTGAT
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