FC931272

Overview
NameFC931272
Unique NameFC931272
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC931272_ssr610 microsatellite FC931272_ssr610:610..621. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig9193 contig Ccv1_Contig9193:169..845. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPK6_ARATH (CBL-interacting serine/threonine-protein kinase 6 OS=Arabidopsis thaliana GN=CIPK6 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.087e-52
Identity = 106/185 (57.30%), Postives = 133/185 (71.89%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSAPK---------VVITKQEMEFEADKSSKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAV-KFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMST 526
            +TKLLDPNPN+RI I K+M+S WFKK A +         +  T+++++F   KS ++ ETLNAFHII+LSEGFDLSP                T+RPASSVIS  EE A+   KF+V+ SESRVR++G+++GRKGKLA+ A+IFAV PS +VVEVKKD+GDTLEYN FCS  LRPALKDI W ST
Sbjct:  255 VTKLLDPNPNTRITIEKVMDSPWFKKQATRSRNEPVAATITTTEEDVDFLVHKSKEETETLNAFHIIALSEGFDLSPLFEEKKKEEKREMRFATSRPASSVISSLEEAARVGNKFDVRKSESRVRIEGKQNGRKGKLAVEAEIFAVAPSFVVVEVKKDHGDTLEYNNFCSTALRPALKDIFWTST 439          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPK5_ORYSJ (CBL-interacting protein kinase 5 OS=Oryza sativa subsp. japonica GN=CIPK5 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.842e-39
Identity = 89/202 (44.06%), Postives = 121/202 (59.90%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSAPKVVITKQEME----------FEADK-----------SSKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADNPTL 544
            +++LLDPNPN RI + K++E  WFKK     V+  Q  E          F AD            SS +P +LNAF IISLS+GFDLS                 T +PAS+++S+ E++A+   F VK  +  V+LQG + GRKG+LAI+A+IF VTPS  VVEVKK  GDTLEY +FC+  LRP+L+DI W   +++P+L
Sbjct:  243 LSRLLDPNPNIRITVEKLVEHPWFKKGYKPAVMLSQPNESNNLKDVHTAFSADHKDNEGKAKEPASSLKPVSLNAFDIISLSKGFDLS-GLFENDKEQKADSRFMTQKPASAIVSKLEQIAETESFKVKKQDGLVKLQGSKEGRKGQLAIDAEIFEVTPSFFVVEVKKSAGDTLEYEKFCNKGLRPSLRDICWDGQSEHPSL 443          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPK6_ORYSJ (CBL-interacting protein kinase 6 OS=Oryza sativa subsp. japonica GN=CIPK6 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.524e-38
Identity = 94/192 (48.96%), Postives = 121/192 (63.02%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSA---------PKVVITKQEMEFEADKSSKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXX--TTRPASSVISRFEEVAKAVKFNVKTSESR---VRLQGQE-SGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTAD 532
            I +LLDPNP +RI++++++E+ WFKK++         P         + EA+K   +PETLNAFH+ISLSEGFDLSP                  T  PAS VISR E VA      ++ ++S    VRL+G E  G KG+LA+ ADIF+V PS+LVV+VKKD GDTLEY  FCS ELRPAL+DIVW + AD
Sbjct:  255 IPRLLDPNPTTRISVAQLVETPWFKKTSISRPVSIELPPAFADPAPAKEEAEKD--EPETLNAFHLISLSEGFDLSPLFEGDSAKGRRDGGMLFATREPASGVISRLEGVAARGGGRMRVTKSGARGVRLEGAERGGAKGRLAVAADIFSVAPSVLVVDVKKDGGDTLEYRSFCSEELRPALQDIVWGAAAD 444          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKK_ORYSJ (CBL-interacting protein kinase 20 OS=Oryza sativa subsp. japonica GN=CIPK20 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.590e-35
Identity = 82/191 (42.93%), Postives = 115/191 (60.21%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSAPKVVITKQEMEFEADKS------SKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTT-RPASSVISRFEEVAKAVKFNVKTSESR--------VRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTA 529
            I++LLDPNP +RI I ++++  WFKK   K   +   M+   ++       + +P +LNAF IISLS+GFDLS                  T +PA++++SR EE+A+   F VK  + +        V+LQG + GRKG+LAI+A+IF V+PS  VVEVKK  GDTLEY  FC+ +LRP+L DI W S A
Sbjct:  253 ISRLLDPNPTTRITIDELVKHPWFKKGHTKRPASSNTMKLNEEEKPANAAMNMKPASLNAFDIISLSQGFDLSGMFCCHGHSSRTQDQLFVTGKPATAIVSRLEEIAETEHFTVKKKQKKRQEEDGMAVKLQGWKEGRKGQLAIDAEIFEVSPSCYVVEVKKTAGDTLEYQAFCNRDLRPSLNDICWTSPA 443          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKK_ARATH (CBL-interacting serine/threonine-protein kinase 20 OS=Arabidopsis thaliana GN=CIPK20 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.130e-33
Identity = 81/188 (43.09%), Postives = 112/188 (59.57%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSAPKVVITKQEMEFEADKS--------SKQPETLNAFHIIS-LSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVA-KAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADN 535
            ++++LDPNPNSRI I KIME+SWF+K   K+   K     + D          S +P + NAF +IS LS+GFDLS                 T + A  ++S+FEE+A  + +FN+  S+  V+++ +  GRKG LAI+ +IF VT S  +VE KK  GDT+EY QFC  ELRP+LKDIVW    +N
Sbjct:  243 LSRILDPNPNSRIKIEKIMENSWFQKGFKKIETPKSPESHQIDSLISDVHAAFSVKPMSYNAFDLISSLSQGFDLS---GLFEKEERSESKFTTKKDAKEIVSKFEEIATSSERFNLTKSDVGVKMEDKREGRKGHLAIDVEIFEVTNSFHMVEFKKSGGDTMEYKQFCDRELRPSLKDIVWKWQGNN 427          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKI_ORYSJ (CBL-interacting protein kinase 18 OS=Oryza sativa subsp. japonica GN=CIPK18 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.749e-32
Identity = 84/197 (42.64%), Postives = 111/197 (56.35%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSAPKVVITKQEMEFE---------------ADKSSKQPE---------TLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVKTSESRV-RLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVW 517
            ++++LDPNP SR+ I+KIME+ WFKK     +I K     E                  SSK+ E          LNAF IISLSEGFDLS                 +++ AS++IS+ E+VA   K  VK  E  V +++G   GRKG LAI+A+IF VTPS  +VE+KK+NGDTLEY      +++PALKDIVW
Sbjct:  246 VSRILDPNPRSRMPITKIMETYWFKKGLDSKLILKNVETNEPVTALADVNVVFSSMGSSSSKKTEEKQDAGKLTNLNAFDIISLSEGFDLS--GLFEETDKKKEARFTSSQSASAIISKLEDVASCSKLTVKKKEGGVLKMEGASEGRKGVLAIDAEIFEVTPSFHLVEIKKNNGDTLEYQHLWKEDMKPALKDIVW 440          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPK2_ORYSJ (CBL-interacting protein kinase 2 OS=Oryza sativa subsp. japonica GN=CIPK2 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 8.957e-31
Identity = 77/195 (39.49%), Postives = 115/195 (58.97%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSA----------PKVVI-TKQEMEFEADKSS----KQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNV-KTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADNP 538
            + ++LDPNP++RI++ KIME+ WF+K            PK  I      +F++  S+    K+P  LNAF IISLS G DLS                 +T  AS++IS+ E++AK ++  + K     ++++G + GRKG + I+A+IF VTP+  +VE+KK NGDTLEY +  + E+RPALKDIVW    + P
Sbjct:  244 LLRILDPNPSTRISMDKIMENPWFRKGLDAKLLRYNLQPKDAIPVDMSTDFDSFNSAPTLEKKPSNLNAFDIISLSTGLDLS---GMFEESDKKESKFTSTSTASTIISKIEDIAKGLRLKLTKKDGGLLKMEGSKPGRKGVMGIDAEIFEVTPNFHLVELKKTNGDTLEYRKVLNQEMRPALKDIVWAWQGEQP 435          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKC_ARATH (CBL-interacting serine/threonine-protein kinase 12 OS=Arabidopsis thaliana GN=CIPK12 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.689e-29
Identity = 80/225 (35.56%), Postives = 112/225 (49.78%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSAPKV-----------VITKQEMEFEADKSSK----------------------QPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWMSTADNPTLGLNLEEQQI*N 577
            ++KLL+ NP  R    +IME+SWFKK    +           V+   E+E ++ +S +                      +P +LNAF IIS S+GFDLS                 +  P S +IS+ EE+AK V F V+  + RV L+G   G KG L I A+IF +TPSL+VVEVKK  GD  EY  FC+NEL+P L+++        P     ++E  I N
Sbjct:  257 LSKLLETNPEKRFTFPEIMENSWFKKGFKHIKFYVEDDKLCNVVDDDELESDSVESDRDSAASESEIEYLEPRRRVGGLPRPASLNAFDIISFSQGFDLS----GLFDDDGEGSRFVSGAPVSKIISKLEEIAKVVSFTVRKKDCRVSLEGSRQGVKGPLTIAAEIFELTPSLVVVEVKKKGGDKTEYEDFCNNELKPKLQNLTADDVVAEPVAVSAVDETAIPN 477          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKI_ARATH (CBL-interacting serine/threonine-protein kinase 18 OS=Arabidopsis thaliana GN=CIPK18 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.206e-29
Identity = 77/202 (38.12%), Postives = 107/202 (52.97%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSAPKV---------------------------VITKQEMEFEADK----SSKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVKTSESRVRLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIV 514
            +T+LLD NP++RI I +IM++ WFKK    V                            +++ + EF+  +    S  +P +LNAF IIS S GFDLS                 +  P S +IS+ EE+AK V F V+  E  +RL+G   G KG L I A+IF +TPSL+VVEVKK  GD  EY +FC+ ELRP L+ ++
Sbjct:  305 LTRLLDTNPDTRITIPEIMKNRWFKKGFKHVKFYIEDDKLCREDEDEEEEASSSGRSSTVSESDAEFDVKRMGIGSMPRPSSLNAFDIISFSSGFDLS---GLFEEEGGEGTRFVSGAPVSKIISKLEEIAKIVSFTVRKKEWSLRLEGCREGAKGPLTIAAEIFELTPSLVVVEVKKKGGDREEYEEFCNKELRPELEKLI 503          
BLAST of FC931272 vs. ExPASy Swiss-Prot
Match: CIPKA_ARATH (CBL-interacting serine/threonine-protein kinase 10 OS=Arabidopsis thaliana GN=CIPK10 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.065e-27
Identity = 74/207 (35.75%), Postives = 114/207 (55.07%), Query Frame = 2
Query:    2 ITKLLDPNPNSRIAISKIMESSWFKKSA--PKVVITKQEMEFEA-------------------------------DKSSKQPETLNAFHIISLSEGFDLSPXXXXXXXXXXXXXXXXTTRPASSVISRFEEVAKAVKFNVKTSESRV-RLQGQESGRKGKLAINADIFAVTPSLLVVEVKKDNGDTLEYNQFCSNELRPALKDIVWM 520
            + K+LDPNP +RI I++I ESSWF+K     +  + K+  E  +                               +  + +P  LNAF +I+LS GFDL+                 + +PAS +IS+ EEVA+ +K +++  E+ + +L+  + GRKG L+++A+IF VTP+  +VEVKK NGDTLEY +  + +LRPAL DIVW+
Sbjct:  243 LCKMLDPNPETRITIARIRESSWFRKGLHMKQKKMEKRVKEINSVEAGTAGTNENGAGPSENGAGPSENGDRVTEENHTDEPTNLNAFDLIALSAGFDLA---GLFGDDNKRESRFTSQKPASVIISKLEEVAQRLKLSIRKREAGLFKLERLKEGRKGILSMDAEIFQVTPNFHLVEVKKSNGDTLEYQKLVAEDLRPALSDIVWV 446          
The following BLAST results are available for this feature:
BLAST of FC931272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
CIPK6_ARATH1.087e-5257.30CBL-interacting serine/threonine-protein kinase 6 ... [more]
CIPK5_ORYSJ6.842e-3944.06CBL-interacting protein kinase 5 OS=Oryza sativa s... [more]
CIPK6_ORYSJ1.524e-3848.96CBL-interacting protein kinase 6 OS=Oryza sativa s... [more]
CIPKK_ORYSJ4.590e-3542.93CBL-interacting protein kinase 20 OS=Oryza sativa ... [more]
CIPKK_ARATH1.130e-3343.09CBL-interacting serine/threonine-protein kinase 20... [more]
CIPKI_ORYSJ4.749e-3242.64CBL-interacting protein kinase 18 OS=Oryza sativa ... [more]
CIPK2_ORYSJ8.957e-3139.49CBL-interacting protein kinase 2 OS=Oryza sativa s... [more]
CIPKC_ARATH1.689e-2935.56CBL-interacting serine/threonine-protein kinase 12... [more]
CIPKI_ARATH2.206e-2938.12CBL-interacting serine/threonine-protein kinase 18... [more]
CIPKA_ARATH2.065e-2735.75CBL-interacting serine/threonine-protein kinase 10... [more]

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Properties
Property NameValue
Genbank descriptionC34103D03EF PostHarvP1 Citrus clementina cDNA clone C34103D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931272 ID=FC931272; Name=FC931272; organism=Citrus clementina; type=EST; length=677bp
GATCACCAAGCTTCTCGATCCAAACCCTAACTCAAGAATCGCTATTTCAA
AGATCATGGAGTCTTCTTGGTTCAAAAAGTCTGCTCCCAAGGTTGTGATA
ACTAAGCAAGAGATGGAATTTGAAGCTGACAAGTCATCGAAGCAACCTGA
GACTCTAAATGCGTTTCATATCATCTCTTTGTCGGAAGGGTTTGATTTGT
CACCTTTGTTTGAGGAGAAAAAGAGAGCGGAAAGAGAGGAGCTGAGATTT
GCAACCACGAGGCCTGCAAGCAGTGTGATCTCAAGATTTGAAGAGGTGGC
CAAGGCCGTTAAGTTTAATGTCAAAACGAGCGAGTCAAGAGTCAGATTAC
AAGGCCAAGAAAGCGGAAGGAAAGGCAAATTGGCTATCAATGCTGACATC
TTTGCCGTTACACCGTCGCTTTTGGTGGTGGAAGTGAAGAAAGATAATGG
TGATACATTGGAGTACAATCAATTCTGTAGCAACGAGCTTCGGCCGGCGC
TTAAGGACATTGTCTGGATGTCAACTGCTGACAATCCCACGCTTGGCTTG
AACCTGGAGGAGCAACAAATTTAAAATTGATTGCTGATGAATTGTGGGTA
TATCTCAGATGATTGATTGATTGTTGTTGATTATGGGATTTAGAGTTTGA
TTAATTTGATGGTGATCATGGAATATC
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