FC931275
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931275 vs. ExPASy Swiss-Prot
Match: VA727_ARATH (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1) HSP 1 Score: 317.775 bits (813), Expect = 3.841e-86 Identity = 161/204 (78.92%), Postives = 176/204 (86.27%), Query Frame = 1 Query: 103 MNQKGLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRXERIELLVDK-QRTCIQADSFRDKEAVRRR 711 M+QKGLIYSFV+KGTVVLAEHT YSGNFSTIA+QCLQKLP +SSKYTYSCDGHTFNFL+D+GFVFLVVADES GRSVPFVFLERVK+DFK+RY ASI+N+E HPLA RFS+AYNLDREFGP LKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDR E+IELLVDK + QADSF+ + RR Sbjct: 1 MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVDNGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRR 204
BLAST of FC931275 vs. ExPASy Swiss-Prot
Match: VA725_ARATH (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2) HSP 1 Score: 228.409 bits (581), Expect = 3.065e-59 Identity = 114/210 (54.29%), Postives = 150/210 (71.43%), Query Frame = 1 Query: 85 LRNWKEMNQKGLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRXERIELLVDK-QRTCIQADSFRDKEAVRRR 711 LR + M Q+ LIYSFV++GTV+L E+T + GNF+ +A QCLQKLP+S++K+TY+CDGHTFN+L+++GF + VVA ESVGR +P FLERVK+DF +RYG A +L+REFG +LKEHMQYC+ HP+E+SKL+K+KAQ+TEVKG+MM+NIEKVLDR E+IELLVDK + QA FR + RR Sbjct: 60 LRVTRTMGQQNLIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQ-------------------ANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRR 250
BLAST of FC931275 vs. ExPASy Swiss-Prot
Match: VA726_ARATH (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2) HSP 1 Score: 226.483 bits (576), Expect = 1.165e-58 Identity = 112/204 (54.90%), Postives = 146/204 (71.57%), Query Frame = 1 Query: 103 MNQKGLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRXERIELLVDK-QRTCIQADSFRDKEAVRRR 711 M Q+ LIYSFV++GTV+LAE+T + GNF+++A QCLQKLP+S++K+TY+CDGHTFN+L D+GF + VV ES GR +P FLERVK+DF +RYG + A +L++EFG +LKEHMQYC HPEE+SKLSK+KAQ+TEVKG+MM+NIEKVLDR E+IELLVDK + QA FR + +R Sbjct: 1 MGQQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLADNGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAK-------------------ANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKR 185
BLAST of FC931275 vs. ExPASy Swiss-Prot
Match: VA722_ARATH (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2) HSP 1 Score: 221.861 bits (564), Expect = 2.868e-57 Identity = 110/204 (53.92%), Postives = 147/204 (72.06%), Query Frame = 1 Query: 103 MNQKGLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRXERIELLVDK-QRTCIQADSFRDKEAVRRR 711 M Q+ LIYSFV++GTV+L E T + GNF++IA QCLQKLP+S++K+TY+CDGHTFN+L+++GF + VVA +S GR +P FLERVK+DF +RYG + A +L++EFG +LKEHMQYCM HP+E+SKL+K+KAQ++EVKG+MM+NIEKVLDR E+IELLVDK + QA FR + RR Sbjct: 1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGG-------------------KAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRR 185
BLAST of FC931275 vs. ExPASy Swiss-Prot
Match: VA721_ARATH (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.090e-56 Identity = 110/204 (53.92%), Postives = 145/204 (71.08%), Query Frame = 1 Query: 103 MNQKGLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRXERIELLVDK-QRTCIQADSFRDKEAVRRR 711 M Q+ LIYSFV++GTV+L E T + GNF++IA QCLQKLP+S++K+TY+CDGHTFN+L++ GF + VVA +S GR +P FLERVK+DF +RYG + A +L++EFG +LKEHMQYCM HP+E+SKL+K+KAQ++EVKG+MM+NIEKVLDR E+IELLVDK + QA FR RR Sbjct: 1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVEDGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGG-------------------KAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRR 185
BLAST of FC931275 vs. ExPASy Swiss-Prot
Match: VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2) HSP 1 Score: 186.808 bits (473), Expect = 1.023e-46 Identity = 95/205 (46.34%), Postives = 137/205 (66.83%), Query Frame = 1 Query: 103 MNQKGLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASS-SKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRXERIELLVDK-QRTCIQADSFRDKEAVRRR 711 M Q+ IYSFV++GT++LAE+T ++GNF +IA QCLQKLP+SS SK+TY+CD HTFNFL++ G+ + VVA +S+ + + FLERVK DFK+RYG + +IA +L++EFGP +KEHM Y + H EE+ KL K+KAQ++EVK IM++NI+K +DR E + +L DK + QA ++ + RR Sbjct: 1 MGQESFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVEDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKAST-------------------AIAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRR 186
BLAST of FC931275 vs. ExPASy Swiss-Prot
Match: VA723_ARATH (Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana GN=VAMP723 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 6.628e-46 Identity = 89/181 (49.17%), Postives = 124/181 (68.51%), Query Frame = 1 Query: 103 MNQKGLIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRXERIELL 645 M Q+ L YSF+++GTV+L E T + GNF+++A Q L+ LP+S++K+TY+CDGHTFN L+++GF + VVA +S GR +P FLERVK+DF +RYG + A +L++EFG LKEHMQYCM HP+E+S L+K KAQ++EVK +MM+NIEKVL R E+L Sbjct: 1 MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQ-------------------ANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEML 162
BLAST of FC931275 vs. ExPASy Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.389e-27 Identity = 69/198 (34.85%), Postives = 116/198 (58.59%), Query Frame = 1 Query: 118 LIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASS-SKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRXERIELLVDKQRTCIQADSFRDKEAVRR 708 ++Y+ V++GTVVL+E T+ S N STIA Q L+K+P + S +YS D + F+ G L +A+E+ GR +PF FLE + F + YG ++ ++AY ++ EF L + + Y + P +++++K ++ +V+G+M++NI+KVLDR ER+ELLVDK +Q ++FR ++ RR Sbjct: 3 ILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHT--------------------ALAYAMNEEFSRVLSQQIDYYSNDPNA-DRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTAN-MQGNTFRFRKQARR 178
BLAST of FC931275 vs. ExPASy Swiss-Prot
Match: VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana GN=VAMP713 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.276e-27 Identity = 69/199 (34.67%), Postives = 119/199 (59.80%), Query Frame = 1 Query: 118 LIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPA--SSSKYTYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRXERIELLVDKQRTCIQADSFRDKEAVRR 708 +I++ V++GTVVL+E ++ S N S+I+ Q L+KLP S S +YS D + F+ G L +ADE+ GR++PF FL+ + F + YG +I + + AY+++ EF L + M++ + P ++S++K ++++V+ +M++NI+KVLDR ER+ELLVDK +Q ++FR ++ RR Sbjct: 3 IIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIHSAQ--------------------AYSMNDEFSRVLSQQMEFYSNDPNA-DRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTEN-MQGNTFRFRKQARR 179
BLAST of FC931275 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.619e-26 Identity = 68/198 (34.34%), Postives = 113/198 (57.07%), Query Frame = 1 Query: 118 LIYSFVSKGTVVLAEHTSYSGNFSTIAIQCLQKLPASSSKY-TYSCDGHTFNFLLDSGFVFLVVADESVGRSVPFVFLERVKDDFKQRYGASIQNEESHPLAXXXXXXXXXXXRFSIAYNLDREFGPRLKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRXERIELLVDKQRTCIQADSFRDKEAVRR 708 ++Y+ V++GTVVLAE ++ S N STIA Q L+K+P + + +YS D + F+ G L +ADE GR +PF FLE + F + YG +I + + AY ++ EF L + ++Y + P +S++K ++ +V+ +M++NI+ +LDR ER+ELLVDK +Q ++FR ++ RR Sbjct: 3 ILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQ--------------------AYAMNDEFSRVLNQQIEYYSNDP-NADTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTAN-MQGNTFRFRKQTRR 178 The following BLAST results are available for this feature:
BLAST of FC931275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931275 ID=FC931275; Name=FC931275; organism=Citrus clementina; type=EST; length=730bpback to top |