FC931281

Overview
NameFC931281
Unique NameFC931281
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length340
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15300 contig Ccv1_Contig15300:1..340. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931281 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 2.256e-43
Identity = 84/108 (77.78%), Postives = 92/108 (85.19%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAENYKAEDEEHKKKVEAKNALENYAXHMRKHCQDEKIGSKLDPADKKKIEDAIDQAISWLDSNQLG*ADEFETR*RSLRA 325
            TTGQKNKITITNDKGRLSKDEIEKMVQEAE YK+EDEEHKKKVEAKNALENYA +MR   QDEKIG KL  ADKKKIED+I+QAI WL+ NQL  ADEFE + + L +
Sbjct:  500 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIQDEKIGEKLPAADKKKIEDSIEQAIQWLEGNQLAEADEFEDKMKELES 607          

HSP 2 Score: 29.6462 bits (65), Expect = 2.256e-43
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  301 DKMKELESICNP 336
            DKMKELESICNP
Sbjct:  600 DKMKELESICNP 611          
BLAST of FC931281 vs. ExPASy Swiss-Prot
Match: HSP72_ARATH (Heat shock cognate 70 kDa protein 2 OS=Arabidopsis thaliana GN=HSC70-2 PE=2 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 3.184e-42
Identity = 80/108 (74.07%), Postives = 93/108 (86.11%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAENYKAEDEEHKKKVEAKNALENYAXHMRKHCQDEKIGSKLDPADKKKIEDAIDQAISWLDSNQLG*ADEFETR*RSLRA 325
            TTG+KNKITITNDKGRLSK++IEKMVQEAE YK+EDEEHKKKVEAKNALENYA +MR   +DEKIG KL  ADKKK+ED+I++AI WLD NQLG ADEFE + + L +
Sbjct:  500 TTGKKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIRDEKIGEKLPAADKKKVEDSIEEAIQWLDGNQLGEADEFEDKMKELES 607          

HSP 2 Score: 29.261 bits (64), Expect = 3.184e-42
Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  301 DKMKELESICNP 336
            DKMKELES+CNP
Sbjct:  600 DKMKELESVCNP 611          
BLAST of FC931281 vs. ExPASy Swiss-Prot
Match: HSP71_SOLLC (Heat shock cognate 70 kDa protein 1 OS=Solanum lycopersicum GN=HSC-I PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.196e-41
Identity = 83/106 (78.30%), Postives = 91/106 (85.85%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAENYKAEDEEHKKKVEAKNALENYAXHMRKHCQDEKIGSKLDPADKKKIEDAIDQAISWLDSNQLG*ADEFETR*RSL 319
            TTGQKNKITITNDKGRLSK+EIEKMVQEAE YKAEDEE KKKVEAKN+LENYA +MR   +DEKIGSKL   DKKKIEDA+DQAISWL+SNQL   DEFE + + L
Sbjct:  502 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEELKKKVEAKNSLENYAYNMRNTVKDEKIGSKLSSDDKKKIEDAVDQAISWLESNQLAEVDEFEDKMKEL 607          

HSP 2 Score: 28.1054 bits (61), Expect = 1.196e-41
Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 1
Query:  301 DKMKELESICNP 336
            DKMKELE ICNP
Sbjct:  602 DKMKELEGICNP 613          
BLAST of FC931281 vs. ExPASy Swiss-Prot
Match: HSP7E_SPIOL (Chloroplast envelope membrane 70 kDa heat shock-related protein OS=Spinacia oleracea GN=SCE70 PE=1 SV=3)

HSP 1 Score: 159.458 bits (402), Expect = 5.853e-41
Identity = 79/108 (73.15%), Postives = 91/108 (84.26%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAENYKAEDEEHKKKVEAKNALENYAXHMRKHCQDEKIGSKLDPADKKKIEDAIDQAISWLDSNQLG*ADEFETR*RSLRA 325
            TTGQKNKI ITNDKGRLSK+EIEKMVQEAE YK+EDEEHKKKVE+KNALENYA +MR   +DEKIG+KL  ADKKKIE+AID +I WLD NQL  ADEF+ + + L +
Sbjct:  500 TTGQKNKIRITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVESKNALENYAYNMRNIVKDEKIGAKLSEADKKKIEEAIDASIQWLDGNQLAEADEFDDKMKELES 607          

HSP 2 Score: 29.6462 bits (65), Expect = 5.853e-41
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  301 DKMKELESICNP 336
            DKMKELESICNP
Sbjct:  600 DKMKELESICNP 611          
BLAST of FC931281 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 9.938e-41
Identity = 80/108 (74.07%), Postives = 90/108 (83.33%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAENYKAEDEEHKKKVEAKNALENYAXHMRKHCQDEKIGSKLDPADKKKIEDAIDQAISWLDSNQLG*ADEFETR*RSLRA 325
            TTGQKNKITITNDKGRLSK+EIEKMVQEAE YK+EDEEHKKKVEAKNALENYA +MR   +DEKI SKL   D+ KIEDAI+QAI WLD NQL  A+EFE + + L +
Sbjct:  500 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDEKIASKLSADDRTKIEDAIEQAIQWLDGNQLAEAEEFEDKMKELES 607          

HSP 2 Score: 28.8758 bits (63), Expect = 9.938e-41
Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  301 DKMKELESICNP 336
            DKMKELES+CNP
Sbjct:  600 DKMKELESLCNP 611          
BLAST of FC931281 vs. ExPASy Swiss-Prot
Match: HSP7C_PETHY (Heat shock cognate 70 kDa protein OS=Petunia hybrida GN=HSP70 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.295e-40
Identity = 79/108 (73.15%), Postives = 92/108 (85.19%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAENYKAEDEEHKKKVEAKNALENYAXHMRKHCQDEKIGSKLDPADKKKIEDAIDQAISWLDSNQLG*ADEFETR*RSLRA 325
            TTGQKNKITITNDKGRLSK+EIE+MVQEAE YK+EDEE KKKVEAKNALENYA +MR   +D+KI S+L  ADKK+IEDAID+AI WLD+NQL  ADEFE + + L +
Sbjct:  500 TTGQKNKITITNDKGRLSKEEIERMVQEAEKYKSEDEELKKKVEAKNALENYAYNMRNTIKDDKINSQLSAADKKRIEDAIDEAIKWLDNNQLAEADEFEDKMKELES 607          

HSP 2 Score: 29.6462 bits (65), Expect = 1.295e-40
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  301 DKMKELESICNP 336
            DKMKELESICNP
Sbjct:  600 DKMKELESICNP 611          
BLAST of FC931281 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.295e-40
Identity = 79/108 (73.15%), Postives = 90/108 (83.33%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAENYKAEDEEHKKKVEAKNALENYAXHMRKHCQDEKIGSKLDPADKKKIEDAIDQAISWLDSNQLG*ADEFETR*RSLRA 325
            TTGQKNKITITNDKGRLSKDEIEKMVQEAE YK+EDEEHKKKV+AKNALENYA +MR   +DEKIG KL   DKKKIED+I+ AI WL++NQL   DEFE + + L +
Sbjct:  500 TTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHKKKVDAKNALENYAYNMRNTIRDEKIGEKLAGDDKKKIEDSIEAAIEWLEANQLAECDEFEDKMKELES 607          

HSP 2 Score: 29.6462 bits (65), Expect = 1.295e-40
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  301 DKMKELESICNP 336
            DKMKELESICNP
Sbjct:  600 DKMKELESICNP 611          
BLAST of FC931281 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 8.252e-40
Identity = 80/106 (75.47%), Postives = 89/106 (83.96%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAENYKAEDEEHKKKVEAKNALENYAXHMRKHCQDEKIGSKLDPADKKKIEDAIDQAISWLDSNQLG*ADEFETR*RSL 319
            TTGQKNKITITNDKGRLSK+EIEKMVQEAE YKAEDEE KKKV+AKNALENYA +MR   +D+KI SKL   DKKKIEDA+D AISWLDSNQL   +EFE + + L
Sbjct:  496 TTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEVKKKVDAKNALENYAYNMRNTIKDDKIASKLPAEDKKKIEDAVDGAISWLDSNQLAEVEEFEDKMKEL 601          

HSP 2 Score: 28.1054 bits (61), Expect = 8.252e-40
Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 1
Query:  301 DKMKELESICNP 336
            DKMKELE ICNP
Sbjct:  596 DKMKELEGICNP 607          
BLAST of FC931281 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.909e-35
Identity = 71/106 (66.98%), Postives = 85/106 (80.19%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAENYKAEDEEHKKKVEAKNALENYAXHMRKHCQDEKIGSKLDPADKKKIEDAIDQAISWLDSNQLG*ADEFETR*RSL 319
            T G KNKITITNDKGRLSK+EIEKMV++AE YKAEDEE KKKVEAKN+LENYA +MR   +DEKIG KL P +K+KIE A++ AI WL+ NQ+   DEFE + + L
Sbjct:  499 TAGVKNKITITNDKGRLSKEEIEKMVKDAERYKAEDEEVKKKVEAKNSLENYAYNMRNTIKDEKIGGKLSPDEKQKIEKAVEDAIQWLEGNQMAEVDEFEDKQKEL 604          

HSP 2 Score: 26.1794 bits (56), Expect = 1.909e-35
Identity = 10/12 (83.33%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  301 DKMKELESICNP 336
            DK KELE ICNP
Sbjct:  599 DKQKELEGICNP 610          
BLAST of FC931281 vs. ExPASy Swiss-Prot
Match: HSP70_LUPPO (Heat shock 70 kDa protein (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 1.934e-35
Identity = 74/108 (68.52%), Postives = 83/108 (76.85%), Query Frame = 2
Query:    2 TTGQKNKITITNDKGRLSKDEIEKMVQEAENYKAEDEEHKKKVEAKNALENYAXHMRKHCQDEKIGSKLDPADKKKIEDAIDQAISWLDSNQLG*ADEFETR*RSLRA 325
            TTGQKNKITITNDKGRLSK++IEKMVQE E YKAEDEE KKKV+ KNALENYA  MR    D+KI SKL   DKKKIED +D AIS LD NQL   +EFE + + L +
Sbjct:  108 TTGQKNKITITNDKGRLSKEDIEKMVQEVEKYKAEDEEVKKKVDTKNALENYAYSMRNTITDDKITSKLPTEDKKKIEDTVDGAISRLDGNQLPEVEEFEDKMKELES 215          

HSP 2 Score: 28.8758 bits (63), Expect = 1.934e-35
Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 1
Query:  301 DKMKELESICNP 336
            DKMKELES+CNP
Sbjct:  208 DKMKELESLCNP 219          
The following BLAST results are available for this feature:
BLAST of FC931281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 177
Match NameE-valueIdentityDescription
HSP71_ARATH2.256e-4377.78Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HSP72_ARATH3.184e-4274.07Heat shock cognate 70 kDa protein 2 OS=Arabidopsis... [more]
HSP71_SOLLC1.196e-4178.30Heat shock cognate 70 kDa protein 1 OS=Solanum lyc... [more]
HSP7E_SPIOL5.853e-4173.15Chloroplast envelope membrane 70 kDa heat shock-re... [more]
HSP72_SOLLC9.938e-4174.07Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP7C_PETHY1.295e-4073.15Heat shock cognate 70 kDa protein OS=Petunia hybri... [more]
HSP73_ARATH1.295e-4073.15Heat shock cognate 70 kDa protein 3 OS=Arabidopsis... [more]
HSP70_MAIZE8.252e-4075.47Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP70_SOYBN1.909e-3566.98Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HSP70_LUPPO1.934e-3568.52Heat shock 70 kDa protein (Fragment) OS=Lupinus po... [more]

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Properties
Property NameValue
Genbank descriptionC34103D12EF PostHarvP1 Citrus clementina cDNA clone C34103D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931281 ID=FC931281; Name=FC931281; organism=Citrus clementina; type=EST; length=340bp
GACAACGGGCCAAAAGAACAAGATCACAATCACCAACGATAAGGGTAGAT
TGTCAAAGGATGAAATTGAGAAGATGGTTCAAGAGGCCGAGAACTACAAG
GCTGAAGACGAGGAGCACAAGAAGAAGGTCGAGGCCAAGAATGCCTTGGA
AAACTATGCCTNACATATGAGGAAACACTGTCAGGACGAGAAGATCGGCT
CCAAACTTGATCCAGCTGACAAGAAGAAGATTGAGGATGCCATTGATCAG
GCAATTTCATGGCTTGATAGCAACCAGCTGGGCTGAGCCGATGAATTTGA
GACAAGATGAAGGAGCTTGAGAGCATCTGCAATCCATCAT
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