FC931318

Overview
NameFC931318
Unique NameFC931318
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT_GOSHI (Actin OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 4.088e-73
Identity = 137/160 (85.62%), Postives = 141/160 (88.12%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRD+KEKLAY+ALDYEQ                LPDGQVITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSSIEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 311
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT13_SOLTU (Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 6.972e-73
Identity = 137/160 (85.62%), Postives = 140/160 (87.50%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTT+AEREIVRDMKEKLAYVALDYEQ                LPDGQVITIGAERFRCPEVLFQPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDCLMKILTERGYSFTTSAEREIVRDMKEKLAYVALDYEQELETAKSSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 311
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT12_SOLTU (Actin-100 (Fragment) OS=Solanum tuberosum GN=AC100 PE=3 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 6.972e-73
Identity = 137/160 (85.62%), Postives = 140/160 (87.50%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTT+AEREIVRDMKEKLAYVALDYEQ                LPDGQVITIGAERFRCPEVLFQPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  132 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDCLMKILTERGYSFTTSAEREIVRDMKEKLAYVALDYEQELETAKSSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 291
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT5_TOBAC (Actin-93 (Fragment) OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 2.029e-72
Identity = 136/160 (85.00%), Postives = 140/160 (87.50%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKLAY+ALDYEQ                LPDGQVITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  132 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETAKTSSSMEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 291
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT11_SOLTU (Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.649e-72
Identity = 135/160 (84.38%), Postives = 141/160 (88.12%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTT+AEREIVRD+KEKLAY+ALDYEQ                LPDGQVITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 311
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT5_SOLTU (Actin-66 (Fragment) OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 4.519e-72
Identity = 135/160 (84.38%), Postives = 140/160 (87.50%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKL+Y+ALDYEQ                LPDGQVITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  132 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDYEQEIETAKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 291
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT4_TOBAC (Actin-66 (Fragment) OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 4.519e-72
Identity = 135/160 (84.38%), Postives = 140/160 (87.50%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTT+AEREIVRD+KEKLAYVALDYEQ                LPDGQVITIG+ERFRCPEVLFQPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  132 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDCLMKILTERGYSFTTSAEREIVRDVKEKLAYVALDYEQELETAKSSSSVEKSYELPDGQVITIGSERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 291
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSJ (Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.902e-72
Identity = 135/160 (84.38%), Postives = 139/160 (86.88%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKLAY+ALDYEQ                LPDGQVITIGAERFRCPEVLFQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  152 GIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDCLMKILTERGYSFTTTAEREIVRDIKEKLAYIALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 311
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSI (Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2 SV=2)

HSP 1 Score: 270.781 bits (691), Expect = 5.902e-72
Identity = 135/160 (84.38%), Postives = 139/160 (86.88%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKLAY+ALDYEQ                LPDGQVITIGAERFRCPEVLFQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  152 GIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDCLMKILTERGYSFTTTAEREIVRDIKEKLAYIALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 311
[Close]
BLAST of FC931318 vs. ExPASy Swiss-Prot
Match: ACT1_ORYSJ (Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.902e-72
Identity = 135/160 (84.38%), Postives = 139/160 (86.88%), Query Frame = 1 
Query:  262 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDMKEKLAYVALDYEQXXXXXXXXXXXXXXXXLPDGQVITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNICASGGVTMFPGL 741
            GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDMKEKL+Y+ALDY+Q                LPDGQVITIGAERFRCPEVLFQPS IGMEAAGIHETTYNSIMKCDVDIRKDLYGNI  SGG TMFPG+
Sbjct:  152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETAKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGI 311
The following BLAST results are available for this feature:
BLAST of FC931318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 428
Match NameE-valueIdentityDescription
ACT_GOSHI4.088e-7385.63Actin OS=Gossypium hirsutum PE=3 SV=1[more]
ACT13_SOLTU6.972e-7385.63Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1[more]
ACT12_SOLTU6.972e-7385.63Actin-100 (Fragment) OS=Solanum tuberosum GN=AC100... [more]
ACT5_TOBAC2.029e-7285.00Actin-93 (Fragment) OS=Nicotiana tabacum PE=3 SV=1[more]
ACT11_SOLTU2.649e-7284.38Actin-97 OS=Solanum tuberosum GN=AC97 PE=3 SV=1[more]
ACT5_SOLTU4.519e-7284.38Actin-66 (Fragment) OS=Solanum tuberosum PE=3 SV=1[more]
ACT4_TOBAC4.519e-7284.38Actin-66 (Fragment) OS=Nicotiana tabacum PE=3 SV=1[more]
ACT3_ORYSJ5.902e-7284.38Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE... [more]
ACT3_ORYSI5.902e-7284.38Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2... [more]
ACT1_ORYSJ5.902e-7284.38Actin-1 OS=Oryza sativa subsp. japonica GN=ACT1 PE... [more]

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Properties
Property NameValue
Genbank descriptionC34103H01EF PostHarvP1 Citrus clementina cDNA clone C34103H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931318 ID=FC931318; Name=FC931318; organism=Citrus clementina; type=EST; length=772bp
ATAAGAAAGTAGGGAAAGGTGGCATTTAATGTGGAATAAACACAAAAAGA
AATTAAGTTATCCAATATAATTCCAGCTCGAAGGGACTAAGTTGCAAGAT
GTTCAATTGGACGGAATAACTTCACCTTTCATTTGTTCTGAAAACTTGGC
AGATGATTGAACTTCTTTTTCCCTATATTGTTATTGAAAATTGCTAATTT
GTTCACCTTTATTACTCATCTCTTGATTTTTGCATTCACCAGAAGTGTGA
TTATTTGAATAGGTATTGTGTTGGATTCTGGTGATGGTGTGAGCCACACA
GTACCCATTTATGAAGGCTATGCCCTCCCTCATGCCATCCTTCGGTTGGA
CCTTGCTGGTCGTGATCTAACAGACGCCTTGATGAAGATCCTCACTGAGA
GAGGGTATTCTTTTACCACGACTGCTGAGCGGGAAATTGTCCGTGACATG
AAGGAAAAACTTGCGTATGTTGCCCTTGATTATGAGCAAGAGTTGGAGGC
TGCAAAAAGCAGCTCTGCAGTTGAGAAGAGTTATGAGTTGCCTGACGGGC
AGGTGATTACAATTGGAGCTGAGAGGTTCCGCTGCCCAGAAGTACTTTTC
CAGCCATCTTTGATTGGAATGGAAGCAGCTGGAATTCATGAAACCACTTA
CAATTCCATAATGAAGTGTGATGTTGATATCAGGAAAGATCTGTATGGAA
ACATTTGTGCTAGTGGTGGGGTCACTATGTTTCCTGGATTGCTGATCGGA
TGAGCAGGAAATTACTGCCCTT
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