FC931325
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931325 vs. ExPASy Swiss-Prot
Match: ATX3H_ARATH (Ataxin-3 homolog OS=Arabidopsis thaliana GN=At3g54130 PE=2 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 4.268e-74 Identity = 137/161 (85.09%), Postives = 143/161 (88.82%), Query Frame = 2 Query: 239 MEGASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGR-VPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVRDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHPLKFYLSAYLDS 718 ME SNGGMLYHEVQES LCAVHCVNTVLQGPFFSEFDLAA+A+DLD ERQVMLEG V + GDFL EESHNVSL GDFSIQVLQKALEV DLQVIPLNCP AEPAQIDPELE+AFICHLHDHWFCIRKVNGEWYNFDSL AAP+H KFYLSA+LDS Sbjct: 1 MERTSNGGMLYHEVQESNLCAVHCVNTVLQGPFFSEFDLAAVAADLDGKERQVMLEGAAVGGFAPGDFLAEESHNVSLGGDFSIQVLQKALEVWDLQVIPLNCPDAEPAQIDPELESAFICHLHDHWFCIRKVNGEWYNFDSLLAAPQHLSKFYLSAFLDS 161
BLAST of FC931325 vs. ExPASy Swiss-Prot
Match: ATX3_ORYSJ (Putative ataxin-3 homolog OS=Oryza sativa subsp. japonica GN=Os01g0851400 PE=3 SV=1) HSP 1 Score: 242.276 bits (617), Expect = 1.987e-63 Identity = 122/161 (75.78%), Postives = 132/161 (81.99%), Query Frame = 2 Query: 248 ASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASS--GDFLTEE--SHNVSLDGDFSIQVLQKALEVRDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHPLKFYLSAYLDS 718 ASNGG+LYHEVQE KLCAVHCVNT LQGPFFSEFDL+ALA DLD+ ERQVM EG AA++ GDFL E SHNVSL GDFSIQVLQKALEV DLQVIPL+ P DPELE AFICHL DHWFCIRKVNGEWYNF+SLY APEH KFYLSA++D+ Sbjct: 7 ASNGGLLYHEVQEGKLCAVHCVNTTLQGPFFSEFDLSALAVDLDQRERQVMSEGAAGAATTAAGDFLAEGEGSHNVSLGGDFSIQVLQKALEVWDLQVIPLDSPDVGSCLFDPELETAFICHLQDHWFCIRKVNGEWYNFNSLYPAPEHLSKFYLSAFIDT 167
BLAST of FC931325 vs. ExPASy Swiss-Prot
Match: ATX3_HUMAN (Ataxin-3 OS=Homo sapiens GN=ATXN3 PE=1 SV=3) HSP 1 Score: 128.257 bits (321), Expect = 4.182e-29 Identity = 63/149 (42.28%), Postives = 91/149 (61.07%), Query Frame = 2 Query: 266 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVRDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHPLKFYLSAYL 712 ++HE QE LCA HC+N +LQG +FS +L+++A LD ER M EG V + FL + S N+ G FSIQV+ AL+V L++I N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL PE YL+ +L Sbjct: 4 IFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERMRMAEGGVTSEDYRTFLQQPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFL 152
BLAST of FC931325 vs. ExPASy Swiss-Prot
Match: ATX3_RAT (Ataxin-3 OS=Rattus norvegicus GN=Atxn3 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.134e-29 Identity = 63/149 (42.28%), Postives = 91/149 (61.07%), Query Frame = 2 Query: 266 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVRDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHPLKFYLSAYL 712 ++HE QE LCA HC+N +LQG +FS +L+++A LD ER M EG V + FL + S N+ G FSIQV+ AL+V L++I N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL PE YL+ +L Sbjct: 4 IFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERLRMAEGGVTSEDYRTFLQQPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFL 152
BLAST of FC931325 vs. ExPASy Swiss-Prot
Match: ATX3_MOUSE (Ataxin-3 OS=Mus musculus GN=Atxn3 PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 7.134e-29 Identity = 63/149 (42.28%), Postives = 91/149 (61.07%), Query Frame = 2 Query: 266 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVRDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHPLKFYLSAYL 712 ++HE QE LCA HC+N +LQG +FS +L+++A LD ER M EG V + FL + S N+ G FSIQV+ AL+V L++I N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL PE YL+ +L Sbjct: 4 IFHEKQEGSLCAQHCLNNLLQGEYFSPVELSSIAHQLDEEERLRMAEGGVTSEDYRTFLQQPSGNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFL 152
BLAST of FC931325 vs. ExPASy Swiss-Prot
Match: ATX3_CHICK (Ataxin-3 OS=Gallus gallus GN=ATXN3 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.589e-28 Identity = 63/149 (42.28%), Postives = 90/149 (60.40%), Query Frame = 2 Query: 266 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVRDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHPLKFYLSAYL 712 ++HE QE LCA HC+N +LQG +FS +L+++A LD ER M EG V + FL + S N+ G FSIQV+ AL+V L++I N P + IDP E +FIC+ +HWF +RK+ +W+N +SL PE YL+ +L Sbjct: 4 IFHERQEGSLCAQHCLNNLLQGEYFSPVELSSIAQQLDEEERMRMAEGGVSSEEYRTFLQQPSVNMDDSGFFSIQVISNALKVWGLELILFNSPEYQRLGIDPINEKSFICNYKEHWFTVRKLGKQWFNLNSLLMGPELISDTYLALFL 152
BLAST of FC931325 vs. ExPASy Swiss-Prot
Match: ATX3L_HUMAN (Putative ataxin-3-like protein OS=Homo sapiens GN=ATXN3L PE=5 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 2.997e-27 Identity = 62/138 (44.93%), Postives = 82/138 (59.42%), Query Frame = 2 Query: 266 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVRDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPE 679 ++HE QE LCA HC+N +LQG +FS +LA++A LD ER M EG V + FL + S N+ G FSIQV+ AL+ L++I N P + IDP E +FIC+ HWF IRK W+N +SL A PE Sbjct: 4 IFHEKQEGFLCAQHCLNNLLQGEYFSPVELASIAHQLDEEERMRMAEGGVTSEEYLAFLQQPSENMDDTGFFSIQVISNALKFWGLEIIHFNNPEYQKLGIDPINERSFICNYKQHWFTIRKFGKHWFNLNSLLAGPE 141
BLAST of FC931325 vs. ExPASy Swiss-Prot
Match: ATX3_CAEEL (Ataxin-3 homolog OS=Caenorhabditis elegans GN=atx-3 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.673e-17 Identity = 48/149 (32.21%), Postives = 80/149 (53.69%), Query Frame = 2 Query: 266 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVRDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHPLKFYLSAYL 712 ++ E QE+ LCA H +N +LQ + DL LA +D+ E+Q++ + + S N++ G FSIQVL+KALE L++ + P + +P A+IC+L +HWF +RK +W+ +S+ P+ Y+S +L Sbjct: 10 IFFEHQEAALCAQHALNMLLQDALYKWQDLRDLAIQMDKMEQQIL--------GNANPTPGRSENMNESGYFSIQVLEKALETFSLKLTNIENPAMVDYKNNPLTARAYICNLREHWFVLRKFGNQWFELNSVNRGPKLLSDTYVSMFL 150
BLAST of FC931325 vs. ExPASy Swiss-Prot
Match: ATX3_CAEBR (Ataxin-3 homolog OS=Caenorhabditis briggsae GN=atx-3 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16 Identity = 45/149 (30.20%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 266 LYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALASDLDRSERQVMLEGRVPAASSGDFLTEESHNVSLDGDFSIQVLQKALEVRDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHPLKFYLSAYL 712 ++ E Q++ LCA H +N +LQ F+ +L LA +D+ E ++ + S N++ G FSIQV++KALE DL++I + P + +P A++ +L +HWF +RK +W+ +S+ P+ Y+ YL Sbjct: 11 IFFERQQAALCAQHALNMLLQDSLFTYENLRDLARQMDQMEHDIL--------GNNANAVGRSENMNDSGFFSIQVIEKALETFDLKLINMENPAMAEFKANPLTARAYVLNLREHWFVLRKFGNQWFELNSVKNGPKLLTDTYVKEYL 151 The following BLAST results are available for this feature:
BLAST of FC931325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931325 ID=FC931325; Name=FC931325; organism=Citrus clementina; type=EST; length=718bpback to top |