FC931338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931338 vs. ExPASy Swiss-Prot
Match: ADAT2_BOVIN (tRNA-specific adenosine deaminase 2 OS=Bos taurus GN=DEADC1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.765e-22 Identity = 56/127 (44.09%), Postives = 76/127 (59.84%), Query Frame = 1 Query: 241 DTLAFMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSLHLSD 621 +T +M+ A+Q AK ALD+ EVPVGC+++ + +V+ M AID LD ++ G S SE+ F LYVT EPCIMCAAAL ++ I V YGC NE+FGGCGS+L + +D Sbjct: 21 ETEKWMEQAMQMAKDALDNTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALDWCRRRGRSPSEV---FEHTVLYVTVEPCIMCAAALRLMRIPLVVYGCQNERFGGCGSVLDIASAD 144 HSP 2 Score: 22.3274 bits (46), Expect = 3.765e-22 Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 3 Query: 663 FQCTGGVMASEAVSL 707 FQCT G A EAV + Sbjct: 152 FQCTPGYRAEEAVEM 166
BLAST of FC931338 vs. ExPASy Swiss-Prot
Match: ADAT2_HUMAN (tRNA-specific adenosine deaminase 2 OS=Homo sapiens GN=ADAT2 PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.410e-21 Identity = 54/127 (42.52%), Postives = 78/127 (61.42%), Query Frame = 1 Query: 241 DTLAFMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSLHLSD 621 +T +M+ A+ AK AL++ EVPVGC+++ + +V+ M AID +LD +++G S SE+ F LYVT EPCIMCAAAL ++ I V YGC NE+FGGCGS+L++ +D Sbjct: 21 ETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEV---FEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144
BLAST of FC931338 vs. ExPASy Swiss-Prot
Match: ADAT2_MOUSE (tRNA-specific adenosine deaminase 2 OS=Mus musculus GN=Adat2 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.152e-20 Identity = 53/127 (41.73%), Postives = 78/127 (61.42%), Query Frame = 1 Query: 241 DTLAFMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSLHLSD 621 +T +M+ A++ AK AL+++EVPVGC+++ + +V+ M AID +LD ++G S S + F LYVT EPCIMCAAAL ++ I V YGC NE+FGGCGS+L++ +D Sbjct: 21 ETEKWMEEAMRMAKEALENIEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCHQHGQSPSTV---FEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASAD 144 HSP 2 Score: 20.7866 bits (42), Expect = 1.152e-20 Identity = 9/15 (60.00%), Postives = 9/15 (60.00%), Query Frame = 3 Query: 663 FQCTGGVMASEAVSL 707 FQC G A EAV L Sbjct: 152 FQCIPGYRAEEAVEL 166
BLAST of FC931338 vs. ExPASy Swiss-Prot
Match: ADAT2_XENTR (tRNA-specific adenosine deaminase 2 OS=Xenopus tropicalis GN=adat2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.064e-19 Identity = 51/119 (42.86%), Postives = 69/119 (57.98%), Query Frame = 1 Query: 253 FMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSL 609 +M A Q A+ AL++ EVPVGC+++ D +V+ M AID +LD +KN ++ F LYVT EPCIMCA AL +L I V YGC NE+FGGCGS+L++ Sbjct: 8 WMHKAFQMAQDALNNGEVPVGCLMVYDNQVVGKGRNEVNETKNATRHAEMVAIDQVLDWCEKNSKKSRDV---FENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNV 123
BLAST of FC931338 vs. ExPASy Swiss-Prot
Match: ADAT2_XENLA (tRNA-specific adenosine deaminase 2 OS=Xenopus laevis GN=adat2 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.312e-18 Identity = 50/123 (40.65%), Postives = 69/123 (56.10%), Query Frame = 1 Query: 253 FMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSLHLSD 621 +M A Q A+ AL++ EVPVGC+++ +V+ M AID +LD + N +++ F LYVT EPCIMCA AL +L I V YGC NE+FGGCGS+L++ D Sbjct: 13 WMHKAFQMAQDALNNGEVPVGCLMVYGNQVVGKGRNEVNETKNATQHAEMVAIDQVLDWCEMNSKKSTDV---FENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNVSGDD 132
BLAST of FC931338 vs. ExPASy Swiss-Prot
Match: ADAT2_DANRE (tRNA-specific adenosine deaminase 2 OS=Danio rerio GN=adat2 PE=2 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16 Identity = 49/119 (41.18%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 253 FMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSL 609 +M A A AL++ EVPVGC+++ + ++I M A+D +LD W + L + + E + LYVT EPCIMCAAAL +L I V YGC NE+FGGCGS+L + Sbjct: 24 WMAKAFDMAVEALENGEVPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLD-WCR--LREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDV 139
BLAST of FC931338 vs. ExPASy Swiss-Prot
Match: TAD2_SCHPO (tRNA-specific adenosine deaminase subunit tad2 OS=Schizosaccharomyces pombe GN=tad2 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 5.423e-13 Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 1 Query: 307 PVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSLHLSDS 624 P CV + G+VI + AI+ +L+ + A F + LYVT EPC+MCAAAL L IK VY+GC N++FGGCGS+ S++ S Sbjct: 238 PGSCVFVYKGEVIGRGFNETNCSLSGIRHAELIAIEKILEHYP---------ASVFKETTLYVTVEPCLMCAAALKQLHIKAVYFGCGNDRFGGCGSVFSINKDQS 334
BLAST of FC931338 vs. ExPASy Swiss-Prot
Match: Y196_STRP8 (Uncharacterized deaminase spyM18_0196 OS=Streptococcus pyogenes serotype M18 GN=spyM18_0196 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.591e-12 Identity = 40/126 (31.75%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 253 FMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSLHLSDSKM 630 FM A+++A+ +L E+P+GCVI++DG++I M AI N + E + L+VT EPC+MC+ A+ + I V YG +N+KFGG S+ + L+D ++ Sbjct: 11 FMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAI---------NEANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQI-LTDERL 126
BLAST of FC931338 vs. ExPASy Swiss-Prot
Match: TADA_STRP6 (tRNA-specific adenosine deaminase OS=Streptococcus pyogenes serotype M6 GN=tadA PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.591e-12 Identity = 40/126 (31.75%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 253 FMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSLHLSDSKM 630 FM A+++A+ +L E+P+GCVI++DG++I M AI N + E + L+VT EPC+MC+ A+ + I V YG +N+KFGG S+ + L+D ++ Sbjct: 11 FMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAI---------NEANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQI-LTDERL 126
BLAST of FC931338 vs. ExPASy Swiss-Prot
Match: TADA_STRP3 (tRNA-specific adenosine deaminase OS=Streptococcus pyogenes serotype M3 GN=tadA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.591e-12 Identity = 40/126 (31.75%), Postives = 65/126 (51.59%), Query Frame = 1 Query: 253 FMDLAIQQAKLALDSLEVPVGCVILEDGKVIXXXXXXXXXXXXXXXXXXMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSLHLSDSKM 630 FM A+++A+ +L E+P+GCVI++DG++I M AI N + E + L+VT EPC+MC+ A+ + I V YG +N+KFGG S+ + L+D ++ Sbjct: 11 FMQEALKEAEKSLQKAEIPIGCVIVKDGEIIGRGHNAREESNQAIMHAEMMAI---------NEANAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQI-LTDERL 126 The following BLAST results are available for this feature:
BLAST of FC931338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931338 ID=FC931338; Name=FC931338; organism=Citrus clementina; type=EST; length=709bpback to top |