FC931346

Overview
NameFC931346
Unique NameFC931346
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length628
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15351 contig Ccv1_Contig15351:20..647. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_CUCSA (Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis sativus GN=PCK PE=2 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 3.309e-106
Identity = 183/209 (87.56%), Postives = 190/209 (90.91%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+RIVSARAYHSLFMHNMCIRPT+ ELEDFGTPDFTIY+AGQFPCNRYTHYMTSSTSID+NL RKEMVILGTQYAGEMKKGLFSLMHYLMP RQILSLHSGCNMGK+GDVA               DHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLEN+VFDEHTREVDY +KSVTENTRAAYPIEYI
Sbjct:  254 KVRIVSARAYHSLFMHNMCIRPTAGELEDFGTPDFTIYHAGQFPCNRYTHYMTSSTSIDMNLDRKEMVILGTQYAGEMKKGLFSLMHYLMPMRQILSLHSGCNMGKNGDVALFFGLSGTGKTTLSTDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENVVFDEHTREVDYSEKSVTENTRAAYPIEYI 462          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_ARATH (Phosphoenolpyruvate carboxykinase [ATP] OS=Arabidopsis thaliana GN=PCKA PE=1 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 5.645e-106
Identity = 179/209 (85.65%), Postives = 190/209 (90.91%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+RIVSARAYHSLFMHNMCIRPT EELE FGTPDFTIYNAGQFPCNRYTHYMTSSTS+D+NLAR+EMVILGTQYAGEMKKGLFS+MHYLMPKR+ILSLHSGCNMGKDGDVA               DHNRYLIGDDEHCW++ GVSNIEGGCYAKC+DLSREKEPDIWNAIKFGTVLEN+VFDEHTREVDY DKSVTENTRAAYPIE+I
Sbjct:  255 KVRIVSARAYHSLFMHNMCIRPTQEELESFGTPDFTIYNAGQFPCNRYTHYMTSSTSVDLNLARREMVILGTQYAGEMKKGLFSVMHYLMPKRRILSLHSGCNMGKDGDVALFFGLSGTGKTTLSTDHNRYLIGDDEHCWTETGVSNIEGGCYAKCVDLSREKEPDIWNAIKFGTVLENVVFDEHTREVDYSDKSVTENTRAAYPIEFI 463          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_MAIZE (Phosphoenolpyruvate carboxykinase [ATP] OS=Zea mays PE=2 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 1.816e-104
Identity = 178/209 (85.17%), Postives = 187/209 (89.47%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+RI+SARAYHSLFMHNMCIRPT EELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSID+NLAR+EMVI+GTQYAGEMKKGLF +MHYLMPKR ILSLHSGCNMGKDGDVA               DHN  LIGDDEHCWSDNGVSNIEGGCYAKCIDL++EKEPDIWNAIKFGTVLEN+VFDEHTREVDY D SVTENTRAAYPIEYI
Sbjct:  250 KVRIISARAYHSLFMHNMCIRPTDEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLARREMVIMGTQYAGEMKKGLFGVMHYLMPKRGILSLHSGCNMGKDGDVALFFGLSGTGKTTLSTDHNGLLIGDDEHCWSDNGVSNIEGGCYAKCIDLAQEKEPDIWNAIKFGTVLENVVFDEHTREVDYADYSVTENTRAAYPIEYI 458          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA2_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Urochloa panicoides GN=PCK2 PE=2 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.140e-98
Identity = 168/209 (80.38%), Postives = 185/209 (88.52%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+RI+++RAYH+LFMHNMCIRPT EELE FGTPDFTIYNAG+FP NRY +YMTSSTSI+I+LAR+EMVILGTQYAGEMKKGLF +MHYLMPKR ILSLHSGCNMGK+GDVA               DHNR LIGDDEHCWSDNGVSNIEGGCYAKCIDLS+EKEPDIWNAIKFGTVLEN+VF+E TREVDY DKS+TENTRAAYPIE+I
Sbjct:  210 KVRIITSRAYHALFMHNMCIRPTEEELESFGTPDFTIYNAGEFPANRYANYMTSSTSINISLARREMVILGTQYAGEMKKGLFGVMHYLMPKRGILSLHSGCNMGKEGDVALFFGLSGTGKTTLSTDHNRLLIGDDEHCWSDNGVSNIEGGCYAKCIDLSQEKEPDIWNAIKFGTVLENVVFNERTREVDYADKSITENTRAAYPIEFI 418          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA1_UROPA (Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Urochloa panicoides GN=PCK1 PE=1 SV=1)

HSP 1 Score: 356.681 bits (914), Expect = 5.658e-98
Identity = 167/209 (79.90%), Postives = 184/209 (88.04%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+RI+++RAYH+LFMHNMCIRPT EELE FGTPDFTIYNAG+FP NRY +YMTSSTSI+I+LAR+EMVILGTQYAGEMKKGLF +MHYLMPKR ILSLHSGCNMGK+GDVA               DHNR LIGDDEHCWSDNGVSNIEGGCYAKCIDLS+EKEPDIWNAI FGTVLEN+VF+E TREVDY DKS+TENTRAAYPIE+I
Sbjct:  208 KVRIITSRAYHALFMHNMCIRPTEEELETFGTPDFTIYNAGEFPANRYANYMTSSTSINISLARREMVILGTQYAGEMKKGLFGVMHYLMPKRGILSLHSGCNMGKEGDVALFFGLSGTGKTTLSTDHNRLLIGDDEHCWSDNGVSNIEGGCYAKCIDLSKEKEPDIWNAITFGTVLENVVFNERTREVDYADKSITENTRAAYPIEFI 416          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA2_SALRD (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Salinibacter ruber (strain DSM 13855) GN=pckA2 PE=3 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 1.771e-75
Identity = 128/209 (61.24%), Postives = 163/209 (77.99%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+RI+ +R YH+LFMHNM IRP+ EEL  FG PDF IYNAG+FP NR T +M+S TS+D++   +EMVILGT+YAGEMKKG+F++MHYLMPK+ +LS+H   N G +GDV+               D NR LIGDDEHCWSD+GV NIEGGCYAK + LS E+EP+I+NAI++GTVLEN+V+DE TR VDY D S+T+NTRA+YP++YI
Sbjct:  118 KVRIICSRPYHALFMHNMLIRPSQEELASFGEPDFVIYNAGEFPANRQTKHMSSKTSVDLSFENQEMVILGTEYAGEMKKGVFTVMHYLMPKKDVLSMHCSANEGDEGDVSLFFGLSGTGKTTLSADPNRKLIGDDEHCWSDDGVFNIEGGCYAKAVGLSEEEEPEIYNAIRYGTVLENMVYDEDTRAVDYDDTSITQNTRASYPLDYI 326          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_DICDI (Phosphoenolpyruvate carboxykinase [ATP] OS=Dictyostelium discoideum GN=pckA PE=1 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 3.340e-74
Identity = 135/211 (63.98%), Postives = 164/211 (77.73%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTS-EELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMPKRQILSLHSGCNMGKD-GDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+R++ ARAYH+LFMHNM IRP + EEL +FG PD+TIYNAGQFP NRYT  M+SS+SI I+ ARKEMVILGTQYAGEMKKG+ ++M YLMPK  +L LHS CN  ++ GD                 D NR LIGDDEH W+D G  NIEGGCYAKCIDLSREKEP+I++AIKFG VLEN+V++E++R+VDY D S+TENTR AYP+E+I
Sbjct:  149 KVRVICARAYHALFMHNMLIRPANREELRNFGEPDYTIYNAGQFPANRYTKGMSSSSSIAIDFARKEMVILGTQYAGEMKKGILTIMMYLMPKMGVLPLHSSCNQARNNGDTTLFFGLSGTGKTTLSADINRELIGDDEHVWTDTGCFNIEGGCYAKCIDLSREKEPEIFDAIKFGAVLENVVYNEYSRKVDYNDVSITENTRCAYPLEHI 359          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_KLULA (Phosphoenolpyruvate carboxykinase [ATP] OS=Kluyveromyces lactis GN=PCK1 PE=3 SV=2)

HSP 1 Score: 276.559 bits (706), Expect = 7.441e-74
Identity = 133/211 (63.03%), Postives = 163/211 (77.25%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMP-KRQILSLHSGCNMG-KDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+R+V ARAYH+LFM NM IRP+ EELE+FG PDFT++NAGQFP N +T  MTS T+++IN  + EMVILGT+YAGEMKKG+F++M YLMP    +L+LHS  N G +D DV                D +R LIGDDEHCWSD+GV NIEGGCYAKC+ LS EKEP+I+NAIKFG+VLENI++D +TREVDY D ++TENTR AYPIEYI
Sbjct:  128 KVRVVCARAYHALFMTNMLIRPSKEELENFGEPDFTVWNAGQFPANTHTSGMTSKTTVEINFKQMEMVILGTEYAGEMKKGIFTVMFYLMPVNHNVLTLHSSANQGIQDNDVTLFFGLSGTGKTTLSADPHRLLIGDDEHCWSDHGVFNIEGGCYAKCLGLSAEKEPEIFNAIKFGSVLENIIYDPNTREVDYEDSTITENTRCAYPIEYI 338          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_CANAL (Phosphoenolpyruvate carboxykinase [ATP] OS=Candida albicans GN=PCK1 PE=3 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.269e-73
Identity = 134/211 (63.51%), Postives = 162/211 (76.78%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMP-KRQILSLHSGCNMG-KDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+RI+ ARAYH+LFM NM IRPT EEL++FG PDFTIYNAGQFP N +T  MTS+TS++IN    EMVILGT+YAGEMKKG+F++M YLMP K ++L+LHS CN G + GDV                D  R LIGDDEHCWSDNGV NIEGGCYAKC+DLS EKEP+I+N+IKFG +LEN+V+   T+ VDY D S+TENTR AYPI++I
Sbjct:  139 KVRIICARAYHALFMTNMLIRPTEEELKNFGEPDFTIYNAGQFPANIHTKGMTSATSVEINFKDMEMVILGTEYAGEMKKGIFTVMFYLMPIKHKVLTLHSSCNQGVEKGDVTLFFGLSGTGKTTLSADPQRKLIGDDEHCWSDNGVFNIEGGCYAKCLDLSAEKEPEIFNSIKFGAILENVVYXXITKVVDYGDSSITENTRCAYPIDFI 349          
BLAST of FC931346 vs. ExPASy Swiss-Prot
Match: PCKA_CANGA (Phosphoenolpyruvate carboxykinase [ATP] OS=Candida glabrata GN=PCK1 PE=3 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 4.823e-73
Identity = 132/211 (62.56%), Postives = 161/211 (76.30%), Query Frame = 1
Query:    1 KLRIVSARAYHSLFMHNMCIRPTSEELEDFGTPDFTIYNAGQFPCNRYTHYMTSSTSIDINLARKEMVILGTQYAGEMKKGLFSLMHYLMP-KRQILSLHSGCNMG-KDGDVAXXXXXXXXXXXXXXXDHNRYLIGDDEHCWSDNGVSNIEGGCYAKCIDLSREKEPDIWNAIKFGTVLENIVFDEHTREVDYLDKSVTENTRAAYPIEYI 627
            K+R+V ARAYH+LFM NM IRPT EEL +FG PDFT++NAGQFP N  T  MTS T+I+IN    EMVILGT+YAGEMKKG+F++M YLMP    +L+LHS CN G K+GDV                D +R LIGDDEHCWSD GV NIEGGCYAKCI+LSREKEP+I++AI+FG+VLEN+++D  + EVDY D S+TENTR AYPI++I
Sbjct:  130 KVRVVCARAYHALFMTNMLIRPTEEELANFGEPDFTVWNAGQFPANARTQDMTSKTTIEINFKAMEMVILGTEYAGEMKKGIFTVMFYLMPVHHNVLTLHSSCNQGIKNGDVTLFFGLSGTGKTTLSADPHRLLIGDDEHCWSDEGVFNIEGGCYAKCINLSREKEPEIFDAIRFGSVLENVIYDSESHEVDYDDSSITENTRCAYPIDFI 340          
The following BLAST results are available for this feature:
BLAST of FC931346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_CUCSA3.309e-10687.56Phosphoenolpyruvate carboxykinase [ATP] OS=Cucumis... [more]
PCKA_ARATH5.645e-10685.65Phosphoenolpyruvate carboxykinase [ATP] OS=Arabido... [more]
PCKA_MAIZE1.816e-10485.17Phosphoenolpyruvate carboxykinase [ATP] OS=Zea may... [more]
PCKA2_UROPA1.140e-9880.38Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Uroch... [more]
PCKA1_UROPA5.658e-9879.90Phosphoenolpyruvate carboxykinase [ATP] 1 OS=Uroch... [more]
PCKA2_SALRD1.771e-7561.24Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Salin... [more]
PCKA_DICDI3.340e-7463.98Phosphoenolpyruvate carboxykinase [ATP] OS=Dictyos... [more]
PCKA_KLULA7.441e-7463.03Phosphoenolpyruvate carboxykinase [ATP] OS=Kluyver... [more]
PCKA_CANAL1.269e-7363.51Phosphoenolpyruvate carboxykinase [ATP] OS=Candida... [more]
PCKA_CANGA4.823e-7362.56Phosphoenolpyruvate carboxykinase [ATP] OS=Candida... [more]

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Properties
Property NameValue
Genbank descriptionC34104B05EF PostHarvP1 Citrus clementina cDNA clone C34104B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931346 ID=FC931346; Name=FC931346; organism=Citrus clementina; type=EST; length=628bp
AAACTCCGAATTGTTTCTGCCAGAGCTTACCATTCCTTGTTCATGCACAA
CATGTGCATCCGACCCACGTCAGAAGAATTAGAAGATTTTGGTACTCCGG
ACTTCACAATATACAATGCTGGGCAGTTTCCTTGCAACCGTTACACCCAC
TATATGACTTCCTCTACTAGCATTGACATAAATCTTGCTAGGAAAGAAAT
GGTCATTCTTGGCACCCAGTATGCCGGAGAAATGAAGAAAGGTCTATTCA
GCTTAATGCATTACCTAATGCCTAAACGTCAAATCCTCTCCCTCCACTCT
GGCTGCAATATGGGAAAAGATGGGGATGTTGCCCTTTTCTTCGGACTATC
CGGTACTGGGAAGACAACTCTGTCTACTGATCATAACCGGTACTTAATTG
GAGATGATGAGCACTGCTGGAGTGATAATGGAGTATCAAACATTGAAGGC
GGGTGCTATGCCAAATGCATTGATCTTTCAAGGGAGAAGGAGCCTGATAT
CTGGAATGCCATCAAATTCGGGACTGTGCTAGAAAACATTGTGTTTGATG
AGCATACACGAGAAGTGGACTACTTGGACAAATCTGTCACGGAGAACACT
CGTGCCGCGTATCCCATAGAGTATATCC
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