FC931356

Overview
NameFC931356
Unique NameFC931356
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length745
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14052 contig Ccv1_Contig14052:112..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: PTI1_SOLLC (Pto-interacting protein 1 OS=Solanum lycopersicum GN=PTI1 PE=1 SV=2)

HSP 1 Score: 379.793 bits (974), Expect = 8.550e-105
Identity = 185/233 (79.40%), Postives = 207/233 (88.84%), Query Frame = 2
Query:   47 MSCFGCCEEDDMHKAADNGNAYMVKSSAGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 745
            MSCF CC++DDMH+A DNG  +M  +SAG +G   A+E+A +  Q V +QPI VP+I+VDELK+IT+NFG+ ALIGEGSYGRVY+G+LKSG AAAIKKLD+SKQPD EFLAQVSMVSRLK EN V+LLGYCVDG  RVLAYE+A NGSLHDILHGRKGVKGAQPGPVLSW QRVKIAVGAAKGLEYLHEKA PHIIHRDIKSSN+L+FDDDVAKIADFDLSNQAPDMAARLHS
Sbjct:    1 MSCFSCCDDDDMHRATDNG-PFMAHNSAGNNGGQRATESAQRETQTVNIQPIAVPSIAVDELKDITDNFGSKALIGEGSYGRVYHGVLKSGRAAAIKKLDSSKQPDREFLAQVSMVSRLKDENVVELLGYCVDGGFRVLAYEYAPNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKAQPHIIHRDIKSSNILLFDDDVAKIADFDLSNQAPDMAARLHS 232          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 4.855e-100
Identity = 182/237 (76.79%), Postives = 203/237 (85.65%), Query Frame = 2
Query:   47 MSCFGCC-EEDDMHKAADNGNAYMVKSS--AGTDGAYH-ASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 745
            MSCFGCC E+DDMHK AD G  +        G D  +H ASE A KG   VK+QPIEVP I   ELKE T++FG+N+LIGEGSYGRVYYG+L +   +AIKKLD++KQPD EFLAQVSMVSRLKH+NFVQLLGYCVDG SR+L+YEFA+NGSLHDILHGRKGVKGAQPGPVLSW QRVKIAVGAA+GLEYLHEKA+PHIIHRDIKSSNVL+F+DDVAKIADFDLSNQAPDMAARLHS
Sbjct:    1 MSCFGCCGEDDDMHKTADYGGRHNQAKHFPPGNDARHHQASETAQKGPPVVKLQPIEVPIIPFSELKEATDDFGSNSLIGEGSYGRVYYGVLNNDLPSAIKKLDSNKQPDNEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHS 237          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y2197_ARATH (Probable protein kinase At2g41970 OS=Arabidopsis thaliana GN=At2g41970 PE=2 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 6.837e-70
Identity = 132/237 (55.70%), Postives = 171/237 (72.15%), Query Frame = 2
Query:   62 CCEEDDMHKAADNGNAYMVKSS-------AGTDGAYHASEAAPKGAQAVKVQPIEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDAS--KQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHS 745
            CC   D   A    N Y    +        G +     +  AP+     KV PIE+P++++DEL  +  NFG  ALIGEGSYGRV+ G  K G A AIKKLDAS  ++PD +F +Q+S+VSRLKH++FV+LLGYC++  +R+L Y+FA+ GSLHD+LHGRKGV+GA+PGPVL+W QRVKIA GAAKGLE+LHEK  P I+HRD++SSNVL+FDD VAK+ADF+L+N + D AARLHS
Sbjct:    3 CCGGADEEPAGPPANQYAAPPNKAGNPNFGGGNRGEPRNPNAPRSGAPAKVLPIEIPSVALDELNRMAGNFGNKALIGEGSYGRVFCGKFK-GEAVAIKKLDASSSEEPDSDFTSQLSVVSRLKHDHFVELLGYCLEANNRILIYQFATKGSLHDVLHGRKGVQGAEPGPVLNWNQRVKIAYGAAKGLEFLHEKVQPPIVHRDVRSSNVLLFDDFVAKMADFNLTNASSDTAARLHS 238          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: BRI1_ARATH (Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidopsis thaliana GN=BRI1 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.700e-36
Identity = 83/193 (43.01%), Postives = 116/193 (60.10%), Query Frame = 2
Query:  170 KGAQAVKVQPIEVPA--ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARL 739
            K A ++ +   E P   ++  +L + T  F  ++LIG G +G VY  ILK G A AIKKL   S Q D EF+A++  + ++KH N V LLGYC  G  R+L YEF   GSL D+LH  K     + G  L+W  R KIA+G+A+GL +LH    PHIIHRD+KSSNVL+ ++  A+++DF ++     M   L
Sbjct:  854 KEALSINLAAFEKPLRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKDGSAVAIKKLIHVSGQGDREFMAEMETIGKIKHRNLVPLLGYCKVGDERLLVYEFMKYGSLEDVLHDPK-----KAGVKLNWSTRRKIAIGSARGLAFLHHNCSPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHL 1041          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.439e-35
Identity = 79/172 (45.93%), Postives = 108/172 (62.79%), Query Frame = 2
Query:  212 AISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLD-ASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPD 724
            A + +EL + T NF     +G G YG+VY G L +G   AIK+    S Q   EF  ++ ++SR+ H+N V+LLG+C D   ++L YE+  NGSL D L G+ GVK       L W +R+KIA+G+ KGL YLHE ADP IIHRD+KS+N+L+ +   AK+ADF LS    D
Sbjct:  621 AFTFEELSKCTNNFSDANDVGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSGKNGVK-------LDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGD 785          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.439e-35
Identity = 97/244 (39.75%), Postives = 125/244 (51.23%), Query Frame = 2
Query:   47 MSCFGCCEEDDMHKA--ADNGNAYMVKSSAGT---------DGAYHASEAAPKGAQAVKVQP------IEVPAISVDELKEITENFGTNALIGEGSYGRVYYGILKS-GHAAAIKKLDASK-QPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            M CF C +  D  K    D  N    K S  T          G    S     G++   + P      I     +  EL   T NF  +  +GEG +GRVY G L S G   A+K+LD +  Q + EFL +V M+S L H N V L+GYC DG  R+L YEF   GSL D LH     K A     L W  R+KIA GAAKGLE+LH+KA+P +I+RD KSSN+L+ +    K++DF L+   P
Sbjct:    1 MGCFSCFDSSDDEKLNPVDESNHGQKKQSQPTVSNNISGLPSGGEKLSSKTNGGSKRELLLPRDGLGQIAAHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEA-----LDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGP 239          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.879e-35
Identity = 85/211 (40.28%), Postives = 121/211 (57.35%), Query Frame = 2
Query:  137 DGAYHASEA-------APKGAQAVKVQPIEVPA--ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARL 739
            DG  H++ A       + + A ++ +   E P   ++  +L E T  F  ++L+G G +G VY   LK G   AIKKL   S Q D EF A++  + ++KH N V LLGYC  G  R+L YE+   GSL D+LH RK +     G  L+W  R KIA+GAA+GL +LH    PHIIHRD+KSSNVL+ ++  A+++DF ++     M   L
Sbjct:  841 DGHSHSATANSAWKFTSAREALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRKKI-----GIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHL 1046          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.455e-35
Identity = 85/211 (40.28%), Postives = 121/211 (57.35%), Query Frame = 2
Query:  137 DGAYHASEA-------APKGAQAVKVQPIEVPA--ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARL 739
            DG  H++ A       + + A ++ +   E P   ++  +L E T  F  ++L+G G +G VY   LK G   AIKKL   S Q D EF A++  + ++KH N V LLGYC  G  R+L YE+   GSL D+LH RK     + G  L+W  R KIA+GAA+GL +LH    PHIIHRD+KSSNVL+ ++  A+++DF ++     M   L
Sbjct:  841 DGHSHSATANSAWKFTSAREALSINLAAFEKPLRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMKYGSLEDVLHDRK-----KTGIKLNWPARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHL 1046          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: Y5613_ARATH (Probable receptor-like protein kinase At5g61350 OS=Arabidopsis thaliana GN=At5g61350 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.142e-35
Identity = 73/166 (43.98%), Postives = 109/166 (65.66%), Query Frame = 2
Query:  227 ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKK-LDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAP 721
            EL+  T+NF  NA+ G G +G+VY G +  G   AIK+   +S+Q   EF  ++ M+S+L+H + V L+G+C +    +L YE+ SNG L D L+G K      P P LSW+QR++I +G+A+GL YLH  A   IIHRD+K++N+L+ ++ VAK++DF LS  AP
Sbjct:  517 ELQTATQNFDENAVCGVGGFGKVYIGEIDGGTQVAIKRGSQSSEQGINEFQTEIQMLSKLRHRHLVSLIGFCDENKEMILVYEYMSNGPLRDHLYGSKE-NDPNPIPTLSWKQRLEICIGSARGLHYLHTGAAQGIIHRDVKTTNILLDENLVAKVSDFGLSKDAP 681          
BLAST of FC931356 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.218e-34
Identity = 78/167 (46.71%), Postives = 105/167 (62.87%), Query Frame = 2
Query:  215 ISVDELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKL-DASKQPDEEFLAQVSMVSRLKHENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHG-RKGVKGAQPGPVLSWQQRVKIAVGAAKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLS 709
            +   +L E T  F   ++IG G +G V+   LK G + AIKKL   S Q D EF+A++  + ++KH N V LLGYC  G  R+L YEF   GSL ++LHG R G K      +L W++R KIA GAAKGL +LH    PHIIHRD+KSSNVL+  D  A+++DF ++
Sbjct:  826 LKFSQLIEATNGFSAASMIGHGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRR----ILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSDFGMA 988          
The following BLAST results are available for this feature:
BLAST of FC931356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PTI1_SOLLC8.550e-10579.40Pto-interacting protein 1 OS=Solanum lycopersicum ... [more]
Y2706_ARATH4.855e-10076.79Probable receptor-like protein kinase At2g47060 OS... [more]
Y2197_ARATH6.837e-7055.70Probable protein kinase At2g41970 OS=Arabidopsis t... [more]
BRI1_ARATH1.700e-3643.01Protein BRASSINOSTEROID INSENSITIVE 1 OS=Arabidops... [more]
Y5977_ARATH1.439e-3545.93Probable leucine-rich repeat receptor-like protein... [more]
PBS1_ARATH1.439e-3539.75Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
BRI1_SOLLC1.879e-3540.28Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
BRI1_SOLPE2.455e-3540.28Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
Y5613_ARATH7.142e-3543.98Probable receptor-like protein kinase At5g61350 OS... [more]
BRL2_ARATH1.218e-3446.71Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionC34104C03EF PostHarvP1 Citrus clementina cDNA clone C34104C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931356 ID=FC931356; Name=FC931356; organism=Citrus clementina; type=EST; length=745bp
GATCTCAGCTAGCTTTCATAGAGGGGCATTATTGTGGCAGTGAATCATGA
GCTGCTTCGGCTGTTGTGAAGAAGATGATATGCATAAAGCTGCTGACAAT
GGCAATGCATACATGGTTAAAAGTTCAGCAGGAACTGATGGAGCCTATCA
TGCATCTGAAGCAGCACCTAAGGGTGCTCAAGCTGTGAAAGTCCAGCCCA
TTGAAGTCCCAGCAATTTCAGTGGATGAATTGAAGGAAATTACTGAGAAC
TTTGGGACTAATGCTTTGATTGGAGAAGGTTCATATGGAAGAGTATATTA
TGGGATTCTTAAAAGTGGACATGCTGCAGCAATAAAAAAGTTGGATGCCA
GCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTTTCCATGGTATCAAGG
TTGAAGCATGAAAACTTTGTTCAGCTGCTCGGGTATTGTGTTGATGGGAC
TTCCCGTGTGCTTGCCTACGAGTTTGCATCTAATGGATCTCTTCATGATA
TTCTTCATGGGAGGAAAGGTGTAAAAGGAGCTCAGCCTGGTCCTGTTTTG
TCATGGCAACAGCGAGTGAAAATTGCTGTAGGGGCTGCGAAAGGGCTTGA
ATACTTGCATGAGAAGGCAGATCCTCATATTATCCATCGCGATATTAAGT
CCAGCAATGTACTAATTTTTGATGATGATGTAGCAAAGATTGCCGACTTT
GATTTATCTAATCAAGCTCCTGATATGGCAGCTCGCCTTCATTCT
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