FC931366

Overview
NameFC931366
Unique NameFC931366
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15531 contig Ccv1_Contig15531:30..726. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931366 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSI (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_031067 PE=3 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 8.164e-71
Identity = 111/160 (69.38%), Postives = 134/160 (83.75%), Query Frame = 1
Query:  145 SSDCVRIKASSSMAAENKNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFP 624
            ++DC     +++ AA    K K V +FD+EEDLAVSLAKYTA+LSAK   E+G+FTVVLSGGSLI ++RKL EPPY+DS++W+KWHVFWVDERVVPKDH+DSNYKLA DGFLS+VPI TG VYAINDALSAEGAA+DYETCLK L K+ ++A S +TGFP
Sbjct:   57 ATDC-----AAAAAAAGSKKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFP 211          

HSP 2 Score: 55.0694 bits (131), Expect = 8.164e-71
Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = 3
Query:  618 FSKFDLMLLGMGPDGHIASLFPGHPL 695
            F +FD+MLLGMGPDGHIASLFPGHPL
Sbjct:  210 FPRFDVMLLGMGPDGHIASLFPGHPL 235          
BLAST of FC931366 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSJ (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0529100 PE=2 SV=2)

HSP 1 Score: 233.417 bits (594), Expect = 1.065e-70
Identity = 109/151 (72.19%), Postives = 130/151 (86.09%), Query Frame = 1
Query:  172 SSSMAAENKNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFP 624
            +++ AA    K K V +FD+EEDLAVSLAKYTA+LSAK   E+G+FTVVLSGGSLI ++RKL EPPY+DS++W+KWHVFWVDERVVPKDH+DSNYKLA DGFLS+VPI TG VYAINDALSAEGAA+DYETCLK L K+ ++A S +TGFP
Sbjct:   61 AAAAAAAGSKKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFP 211          

HSP 2 Score: 55.0694 bits (131), Expect = 1.065e-70
Identity = 23/26 (88.46%), Postives = 25/26 (96.15%), Query Frame = 3
Query:  618 FSKFDLMLLGMGPDGHIASLFPGHPL 695
            F +FD+MLLGMGPDGHIASLFPGHPL
Sbjct:  210 FPRFDVMLLGMGPDGHIASLFPGHPL 235          
BLAST of FC931366 vs. ExPASy Swiss-Prot
Match: 6PGL5_ARATH (Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 9.717e-69
Identity = 111/161 (68.94%), Postives = 130/161 (80.75%), Query Frame = 1
Query:  142 KSSDCVRIKASSSMAAENKNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFP 624
            KSSD  R   S +     K + K V+++D EE+L + LAK+TADLS KF KE+G+FTVV+SGGSLI SLRKLVE PYVDSI+WA+WH FWVDERVVPK+HDDSNYKLAYD FLS+VPI  GNVYAIN+ALSAE AA+DYETCLKHL  +NIL  S +TGFP
Sbjct:   59 KSSDTRRKVKSMATTNIGKEEKKRVEIYDLEENLVIDLAKFTADLSDKFCKERGAFTVVVSGGSLIKSLRKLVESPYVDSIDWARWHFFWVDERVVPKNHDDSNYKLAYDSFLSKVPIPPGNVYAINEALSAEAAADDYETCLKHLVNTNILRVSESTGFP 219          

HSP 2 Score: 53.5286 bits (127), Expect = 9.717e-69
Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 3
Query:  618 FSKFDLMLLGMGPDGHIASLFPGHPL 695
            F KFDLMLLGMGPDGH+ASLFPGH L
Sbjct:  218 FPKFDLMLLGMGPDGHVASLFPGHGL 243          
BLAST of FC931366 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSJ (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0547100 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.670e-59
Identity = 93/141 (65.96%), Postives = 111/141 (78.72%), Query Frame = 1
Query:  208 KNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPSL 630
            K + +FD+EE LA SLAKYTA LS +   E+G+FTV LSGGSLI +LRKL E PY++++EW+KWHVFWVDERVVPKDH DSNYKLA DG LS+VPI    +YAIND LSAEGAA++YETCLK L    ++A S  TGFP L
Sbjct:   76 KKLLIFDAEEYLAESLAKYTARLSGEAVAERGAFTVALSGGSLIKALRKLTESPYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKL 216          

HSP 2 Score: 53.5286 bits (127), Expect = 4.670e-59
Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 3
Query:  618 FSKFDLMLLGMGPDGHIASLFPGHPL 695
            F K DLMLLGMGPDGH+ASLFPGHP+
Sbjct:  213 FPKLDLMLLGMGPDGHVASLFPGHPV 238          
BLAST of FC931366 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSI (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_30141 PE=3 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 4.670e-59
Identity = 93/141 (65.96%), Postives = 111/141 (78.72%), Query Frame = 1
Query:  208 KNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPSL 630
            K + +FD+EE LA SLAKYTA LS +   E+G+FTV LSGGSLI +LRKL E PY++++EW+KWHVFWVDERVVPKDH DSNYKLA DG LS+VPI    +YAIND LSAEGAA++YETCLK L    ++A S  TGFP L
Sbjct:   76 KKLLIFDAEEYLAESLAKYTARLSGEAVAERGAFTVALSGGSLIKALRKLTESPYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKL 216          

HSP 2 Score: 53.5286 bits (127), Expect = 4.670e-59
Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 3
Query:  618 FSKFDLMLLGMGPDGHIASLFPGHPL 695
            F K DLMLLGMGPDGH+ASLFPGHP+
Sbjct:  213 FPKLDLMLLGMGPDGHVASLFPGHPV 238          
BLAST of FC931366 vs. ExPASy Swiss-Prot
Match: 6PGL2_ARATH (Probable 6-phosphogluconolactonase 2 OS=Arabidopsis thaliana GN=At3g49360 PE=2 SV=2)

HSP 1 Score: 179.489 bits (454), Expect = 1.319e-52
Identity = 88/140 (62.86%), Postives = 106/140 (75.71%), Query Frame = 1
Query:  217 QVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEG----AAEDYETCLKHLTKSNILATSAATGFP 624
            +VF +  ++AV LAKYTADLS+KF KE+G FTVVLSGG LI  L KL+E PY+DSIEW+KWH+FWVDERV   DH DSNYKLAYDGFLS+VP+   N+YAI++ L AEG    AAE YE CLK     NI+ T  ++GFP
Sbjct:    7 RVFKTNNEMAVELAKYTADLSSKFCKERGVFTVVLSGGDLIAWLWKLLEAPYIDSIEWSKWHIFWVDERVCAWDHADSNYKLAYDGFLSKVPVPAENIYAIDNGLGAEGNAELAAERYEECLKQKVNQNIIRTYKSSGFP 146          

HSP 2 Score: 48.521 bits (114), Expect = 1.319e-52
Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 3
Query:  618 FSKFDLMLLGMGPDGHIASLFPGH 689
            F +FDL LLGMGPDGH+ASLFPGH
Sbjct:  145 FPQFDLQLLGMGPDGHMASLFPGH 168          
BLAST of FC931366 vs. ExPASy Swiss-Prot
Match: 6PGL4_ARATH (Probable 6-phosphogluconolactonase 4 OS=Arabidopsis thaliana GN=At5g24410 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 9.953e-50
Identity = 84/147 (57.14%), Postives = 110/147 (74.83%), Query Frame = 1
Query:  196 KNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAED----YETCLKHLTKSNILATSAATGFP 624
            K K+K + VF ++++L+ ++A YTA+LSAKF KE+G FTVVLSGG LI  L +L+EP Y +SIEW+KWH+FWVDERVVP DH+DSNYKLA+DGFLS+VPI   N+Y I+   +A G A+     YE CLK L   NI+ T  ++GFP
Sbjct:    7 KTKSKKI-VFPTKKELSEAMATYTANLSAKFCKERGYFTVVLSGGDLISWLSELLEPKYQESIEWSKWHIFWVDERVVPLDHEDSNYKLAFDGFLSKVPIPIANIYPIDKDCAALGDAKSAALLYEECLKRLVNRNIIRTYKSSGFP 152          

HSP 2 Score: 48.521 bits (114), Expect = 9.953e-50
Identity = 20/24 (83.33%), Postives = 22/24 (91.67%), Query Frame = 3
Query:  618 FSKFDLMLLGMGPDGHIASLFPGH 689
            F +FDL LLGMGPDGH+ASLFPGH
Sbjct:  151 FPQFDLQLLGMGPDGHMASLFPGH 174          
BLAST of FC931366 vs. ExPASy Swiss-Prot
Match: 6PGL3_ARATH (Probable 6-phosphogluconolactonase 3 OS=Arabidopsis thaliana GN=At5g24420 PE=2 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 2.874e-49
Identity = 85/139 (61.15%), Postives = 105/139 (75.54%), Query Frame = 1
Query:  220 VFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAED----YETCLKHLTKSNILATSAATGFP 624
            VF ++ +L+ ++A+YTA+LSAKF KEKG FTVVLSGG LID L KLV+PPY+DSIEW KWHVFWVDERV   +  DSNYKLA +GFLS+VPI   N+YAI+  L+A+G AE     YE CLK+L K  I+  S  TG+P
Sbjct:    8 VFPTKNELSEAMAEYTANLSAKFIKEKGLFTVVLSGGDLIDWLCKLVQPPYIDSIEWPKWHVFWVDERVCAWEDPDSNYKLAMEGFLSKVPIPDKNIYAIDKHLAADGNAEHCATLYEECLKNLVKEKIIPISKKTGYP 146          

HSP 2 Score: 47.7506 bits (112), Expect = 2.874e-49
Identity = 19/25 (76.00%), Postives = 22/25 (88.00%), Query Frame = 3
Query:  618 FSKFDLMLLGMGPDGHIASLFPGHP 692
            + +FDL LLGMGPDGH+ASLFP HP
Sbjct:  145 YPEFDLQLLGMGPDGHMASLFPNHP 169          
BLAST of FC931366 vs. ExPASy Swiss-Prot
Match: 6PGL1_ARATH (Probable 6-phosphogluconolactonase 1 OS=Arabidopsis thaliana GN=At1g13700 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.229e-39
Identity = 65/137 (47.45%), Postives = 95/137 (69.34%), Query Frame = 1
Query:  214 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFP 624
            ++V ++ E+L++ L  Y A++S    KE G+F +VLSGGSLI  + KL+EPPY   ++WAKW+VFW DERVV K+HDDSNYKLA D  LS+V +   ++ +IND +SAE AA +YE  ++ + +S  +A S  +  P
Sbjct:   13 IRVHENLEELSIDLVDYIAEISEASIKEHGAFCIVLSGGSLISFMGKLIEPPYDKIVDWAKWYVFWADERVVAKNHDDSNYKLAKDNLLSKVNVFPRHICSINDTVSAEEAATEYEFAIRQMVRSRTVAASDNSDSP 149          

HSP 2 Score: 45.4394 bits (106), Expect = 2.229e-39
Identity = 18/23 (78.26%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  624 KFDLMLLGMGPDGHIASLFPGHP 692
            +FDL+LLGMG DGH+ASLFP HP
Sbjct:  150 RFDLILLGMGSDGHVASLFPNHP 172          
BLAST of FC931366 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSJ (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. japonica GN=Os07g0604000 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.139e-38
Identity = 59/141 (41.84%), Postives = 93/141 (65.96%), Query Frame = 1
Query:  202 KNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFP 624
            +N  +++F+S ++++  LA+Y + +S    KE+G F + LSGG L+  L KL E PY  +++W+KW++FW DER V K+H +SNY++  +GFLS+VPI  G+VY+IND  + E AA DYE  ++ L K   +  S +   P
Sbjct:   13 RNNEIRIFESSDEMSTDLAEYISQVSEISVKERGYFAIALSGGPLVSFLGKLCEAPYNKTLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCP 153          

HSP 2 Score: 44.2838 bits (103), Expect = 3.139e-38
Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 3
Query:  624 KFDLMLLGMGPDGHIASLFPGHP 692
            KFDL+LL MG DGH+ASLFP HP
Sbjct:  154 KFDLILLSMGSDGHVASLFPNHP 176          
The following BLAST results are available for this feature:
BLAST of FC931366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
6PGL4_ORYSI8.164e-7169.38Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL4_ORYSJ1.065e-7072.19Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL5_ARATH9.717e-6968.94Probable 6-phosphogluconolactonase 5, chloroplasti... [more]
6PGL3_ORYSJ4.670e-5965.96Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL3_ORYSI4.670e-5965.96Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL2_ARATH1.319e-5262.86Probable 6-phosphogluconolactonase 2 OS=Arabidopsi... [more]
6PGL4_ARATH9.953e-5057.14Probable 6-phosphogluconolactonase 4 OS=Arabidopsi... [more]
6PGL3_ARATH2.874e-4961.15Probable 6-phosphogluconolactonase 3 OS=Arabidopsi... [more]
6PGL1_ARATH2.229e-3947.45Probable 6-phosphogluconolactonase 1 OS=Arabidopsi... [more]
6PGL2_ORYSJ3.139e-3841.84Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionC34104D03EF PostHarvP1 Citrus clementina cDNA clone C34104D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931366 ID=FC931366; Name=FC931366; organism=Citrus clementina; type=EST; length=696bp
GACCACACTTCGCTCGTCTCTTTCTCCACTTGCTTTCTTCCAAAATCACT
TTATTCCAAAACCCGCTTTCAGTTTCAGTTTCAGTTACTCAGAAGACCAA
ACTCACTCCTCCAATTTCGAAACATTTCCCTTGATCGGAACAAATCATCG
GACTGCGTGAGAATCAAGGCATCATCATCAATGGCTGCCGAGAATAAGAA
CAAGAACAAGAACGTACAAGTTTTTGACTCAGAGGAAGATCTGGCTGTGT
CTTTGGCCAAATACACCGCCGATCTATCTGCCAAGTTCGGTAAAGAGAAG
GGCTCCTTCACTGTCGTCTTATCCGGTGGTTCTCTCATCGACTCCCTCAG
GAAATTAGTGGAACCCCCGTATGTAGATTCAATTGAATGGGCGAAATGGC
ATGTGTTTTGGGTTGATGAAAGAGTTGTTCCCAAGGATCATGATGATAGC
AATTATAAGCTTGCTTATGATGGTTTCCTTTCTCAGGTACCAATTACCAC
TGGCAATGTCTATGCCATCAATGATGCATTATCTGCTGAAGGTGCAGCTG
AAGATTACGAGACTTGTCTCAAGCATTTGACAAAGAGCAATATATTAGCT
ACATCTGCTGCTACTGGTTTTCCAAGTTTGATCTCATGCTTCTGGGTATG
GGTCCAGATGGACATATAGCTTCTCTGTTTCCAGGNCATCCTCTTC
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