FC931368

Overview
NameFC931368
Unique NameFC931368
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length664
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig408 contig Ccv1_Contig408:255..918. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NCPR_CATRO (NADPH--cytochrome P450 reductase OS=Catharanthus roseus GN=CPR PE=2 SV=1)

HSP 1 Score: 375.17 bits (962), Expect = 1.689e-103
Identity = 176/220 (80.00%), Postives = 200/220 (90.91%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            GKDE  Q +VA+QRSLLEVM+EFPSAKPPLGVFFAAI PRLQPR+YSISSSPR+APSRIHVTCALVYEKTP GR+HKG+CSTWMKN++P+E+S DCSWAPIFVRQSNFKLPAD KVP+IMIGPGTGLAPFRGFLQER ALKE G ELG ++ FFGCRNRKMDYIYEDELN+F++ GALS+L+VAFSREGP K+YVQHKM EK+ DIW M+S+GA +  CG
Sbjct:  449 GKDEYAQSLVANQRSLLEVMAEFPSAKPPLGVFFAAIAPRLQPRFYSISSSPRMAPSRIHVTCALVYEKTPGGRIHKGVCSTWMKNAIPLEESRDCSWAPIFVRQSNFKLPADPKVPVIMIGPGTGLAPFRGFLQERLALKEEGAELGTAVFFFGCRNRKMDYIYEDELNHFLEIGALSELLVAFSREGPTKQYVQHKMAEKASDIWRMISDGAYVYVCG 668          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NCPR_PHAAU (NADPH--cytochrome P450 reductase OS=Phaseolus aureus PE=1 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 2.790e-98
Identity = 165/220 (75.00%), Postives = 193/220 (87.73%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            GKDE  +W+V SQRSL+EVM+EFPSAKPPLGVFFAAI PRLQPRYYSISSSPR AP R+HVTCALVY  TPTGR+HKG+CSTWMKN++P EKS DCS APIF+R SNFKLP D  +PIIM+GPGTGLAPFRGFLQER+ALKE G +LGP+LLFFGCRNR+MD+IYEDEL +FV+ G+LS+LIVAFSREG  KEYVQHKMM+K+  +W+++S+G  L  CG
Sbjct:  425 GKDEYSKWVVGSQRSLVEVMAEFPSAKPPLGVFFAAIAPRLQPRYYSISSSPRFAPQRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPSEKSQDCSSAPIFIRPSNFKLPVDHSIPIIMVGPGTGLAPFRGFLQERYALKEDGVQLGPALLFFGCRNRQMDFIYEDELKSFVEQGSLSELIVAFSREGAEKEYVQHKMMDKAAHLWSLISQGGYLYVCG 644          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NCPR_BOVIN (NADPH--cytochrome P450 reductase OS=Bos taurus GN=POR PE=2 SV=3)

HSP 1 Score: 202.216 bits (513), Expect = 1.959e-51
Identity = 94/221 (42.53%), Postives = 149/221 (67.42%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSE-GAXLVCCG 662
            GK+   +W++ ++R +L ++ ++PS +PP+      ++PRLQ RYYSI+SS +V P+ +H+    V  +T TGR++KG+ ++W++   P  ++   +  P++VR+S F+LP  A  P+IM+GPGTG+APF GF+QER  L++ G E+G +LL++GCR    DY+Y +EL  F + GAL+QL VAFSRE P K YVQH + +    +W ++ E GA +  CG
Sbjct:  412 GKELYLRWVLEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYETKTGRINKGVATSWLRAKEPAGENGGRALVPMYVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAGFHKDGALTQLNVAFSREQPQKVYVQHLLKKDKEHLWKLIHEGGAHIYVCG 631          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NCPR_DROME (NADPH--cytochrome P450 reductase OS=Drosophila melanogaster GN=Cpr PE=2 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 2.559e-51
Identity = 101/220 (45.91%), Postives = 149/220 (67.73%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSE--GAXLVC 656
            GK++   WI  + R+++ ++ +  S +PP+      ++PRLQPRYYSISSS ++ P+ +HVT  LV  KTPTGR++KG+ +T++KN  P  + ++    P+F+R+S F+LP   + PIIM+GPGTGLAPFRGF+QER  L++ G  +G S+L+FGCR R  DYIYE EL  +V+ G L+ L  AFSR+   K YVQH + + +  IWN++ E  G   +C
Sbjct:  416 GKEKYQSWIQDACRNIVHILEDIKSCRPPID-HVCELLPRLQPRYYSISSSAKLHPTDVHVTAVLVEYKTPTGRINKGVATTYLKNKQP--QGSEEVKVPVFIRKSQFRLPTKPETPIIMVGPGTGLAPFRGFIQERQFLRDEGKTVGESILYFGCRKRSEDYIYESELEEWVKKGTLN-LKAAFSRDQGKKVYVQHLLEQDADLIWNVIGENKGHFYIC 631          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NCPR_HUMAN (NADPH--cytochrome P450 reductase OS=Homo sapiens GN=POR PE=1 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 9.723e-51
Identity = 93/220 (42.27%), Postives = 144/220 (65.45%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSEGAXLVCCG 662
            GK+    W+V ++R +L ++ + PS +PP+      ++PRLQ RYYSI+SS +V P+ +H+   +V  +T  GR++KG+ + W++   P  ++   +  P+FVR+S F+LP  A  P+IM+GPGTG+APF GF+QER  L++ G E+G +LL++GCR    DY+Y +EL  F + GAL+QL VAFSRE   K YVQH + +    +W ++  GA +  CG
Sbjct:  412 GKELYLSWVVEARRHILAILQDCPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCG 630          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NCPR_PIG (NADPH--cytochrome P450 reductase OS=Sus scrofa GN=POR PE=1 SV=2)

HSP 1 Score: 198.749 bits (504), Expect = 2.166e-50
Identity = 95/221 (42.99%), Postives = 146/221 (66.06%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSE-GAXLVCCG 662
            GK+    W+V ++R +L ++ ++PS +PP+       +PRLQ RYYSI+SS +V P+ +H+   +V  +T +GRV+KG+ ++W++   P  ++   +  P+FVR+S F+LP  A  P+IM+GPGTG+APF GF+QER  L+E G E+G +LL++GCR    DY+Y +EL  F   GAL++L VAFSRE P K YVQH +      +W ++ + GA +  CG
Sbjct:  412 GKELYLSWVVEARRHILAILQDYPSLRPPID-HLCERLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKSGRVNKGVATSWLRAKEPAGENGRRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLQEQGKEVGETLLYYGCRRSDEDYLYREELAQFHAKGALTRLSVAFSREQPQKVYVQHLLKRDKEHLWKLIHDGGAHIYICG 631          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NCPR_RAT (NADPH--cytochrome P450 reductase OS=Rattus norvegicus GN=Por PE=1 SV=3)

HSP 1 Score: 198.364 bits (503), Expect = 2.829e-50
Identity = 94/221 (42.53%), Postives = 145/221 (65.61%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSE-GAXLVCCG 662
            GK+    W+V ++R +L ++ ++PS +PP+      ++PRLQ RYYSI+SS +V P+ +H+    V  +  +GRV+KG+ ++W++   P  ++   +  P+FVR+S F+LP  +  P+IM+GPGTG+APF GF+QER  L+E G E+G +LL++GCR    DY+Y +EL  F + GAL+QL VAFSRE   K YVQH +      +W ++ E GA +  CG
Sbjct:  412 GKELYLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEAKSGRVNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGIAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALTQLNVAFSREQAHKVYVQHLLKRDREHLWKLIHEGGAHIYVCG 631          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NCPR_RABIT (NADPH--cytochrome P450 reductase OS=Oryctolagus cuniculus GN=POR PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.695e-50
Identity = 94/221 (42.53%), Postives = 144/221 (65.16%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSE-GAXLVCCG 662
            GK+    W+V ++R +L ++ ++PS +PP+      ++PRLQ RYYSI+SS +V P+ +H+    V  +T  GR++KG+ ++W++   P  ++   +  P+FVR+S F+LP  A  P+IM+GPGTG+APF GF+QER  L++ G E+G +LL++GCR    DY+Y +EL  F + G LSQL VAFSRE   K YVQH +      +W ++ E GA +  CG
Sbjct:  413 GKELYLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYETKAGRLNKGVATSWLRAKEPAGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRAAEDYLYREELAGFQKDGTLSQLNVAFSREQAQKVYVQHLLRRDKEHLWRLIHEGGAHIYVCG 632          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NCPR_MOUSE (NADPH--cytochrome P450 reductase OS=Mus musculus GN=Por PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 3.695e-50
Identity = 94/221 (42.53%), Postives = 144/221 (65.16%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSE-GAXLVCCG 662
            GK+    W+V ++R +L ++ ++PS +PP+      ++PRLQ RYYSI+SS +V P+ +H+    V  +  +GRV+KG+ ++W++   P  ++   +  P+FVR+S F+LP     P+IM+GPGTG+APF GF+QER  L+E G E+G +LL++GCR    DY+Y +EL  F + GAL+QL VAFSRE   K YVQH +      +W ++ E GA +  CG
Sbjct:  412 GKELYLSWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVAVEYEAKSGRVNKGVATSWLRTKEPAGENGRRALVPMFVRKSQFRLPFKPTTPVIMVGPGTGVAPFMGFIQERAWLREQGKEVGETLLYYGCRRSDEDYLYREELARFHKDGALTQLNVAFSREQAHKVYVQHLLKRDKEHLWKLIHEGGAHIYVCG 631          
BLAST of FC931368 vs. ExPASy Swiss-Prot
Match: NCPR_CAVPO (NADPH--cytochrome P450 reductase OS=Cavia porcellus GN=POR PE=2 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 2.395e-49
Identity = 92/221 (41.63%), Postives = 146/221 (66.06%), Query Frame = 3
Query:    3 GKDE*PQWIVASQRSLLEVMSEFPSAKPPLGVFFAAIVPRLQPRYYSISSSPRVAPSRIHVTCALVYEKTPTGRVHKGLCSTWMKNSLPMEKSNDCSWAPIFVRQSNFKLPADAKVPIIMIGPGTGLAPFRGFLQERFALKEAGTELGPSLLFFGCRNRKMDYIYEDELNNFVQSGALSQLIVAFSREGPIKEYVQHKMMEKSWDIWNMLSE-GAXLVCCG 662
            GK+    W+V ++R +L ++ ++PS +PP+      ++PRLQ RYYSI+SS +V P+ +H+   +V  +T +GR++KG+ ++W++   P  ++   +  P+FVR+S F+LP  +  P+IM+GPGTG+APF GF+QER  L++ G E+G +LL++GCR    DY+Y +EL  F + G L+QL VAFSRE   K YVQH +      +W ++ E GA +  CG
Sbjct:  412 GKELYLTWVVEARRHILAILQDYPSLRPPID-HLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETKSGRINKGVATSWLQAKDPAGENGRRALVPMFVRKSQFRLPFKSTTPVIMVGPGTGVAPFIGFIQERAWLQQQGKEVGETLLYYGCRRSDEDYLYREELAQFHKDGTLTQLNVAFSREQAQKVYVQHLLKRDQEHLWKLIHEDGAHIYVCG 631          
The following BLAST results are available for this feature:
BLAST of FC931368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
NCPR_CATRO1.689e-10380.00NADPH--cytochrome P450 reductase OS=Catharanthus r... [more]
NCPR_PHAAU2.790e-9875.00NADPH--cytochrome P450 reductase OS=Phaseolus aure... [more]
NCPR_BOVIN1.959e-5142.53NADPH--cytochrome P450 reductase OS=Bos taurus GN=... [more]
NCPR_DROME2.559e-5145.91NADPH--cytochrome P450 reductase OS=Drosophila mel... [more]
NCPR_HUMAN9.723e-5142.27NADPH--cytochrome P450 reductase OS=Homo sapiens G... [more]
NCPR_PIG2.166e-5042.99NADPH--cytochrome P450 reductase OS=Sus scrofa GN=... [more]
NCPR_RAT2.829e-5042.53NADPH--cytochrome P450 reductase OS=Rattus norvegi... [more]
NCPR_RABIT3.695e-5042.53NADPH--cytochrome P450 reductase OS=Oryctolagus cu... [more]
NCPR_MOUSE3.695e-5042.53NADPH--cytochrome P450 reductase OS=Mus musculus G... [more]
NCPR_CAVPO2.395e-4941.63NADPH--cytochrome P450 reductase OS=Cavia porcellu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC34104D05EF PostHarvP1 Citrus clementina cDNA clone C34104D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931368 ID=FC931368; Name=FC931368; organism=Citrus clementina; type=EST; length=664bp
CTGGAAAGGATGAATAACCACAATGGATTGTTGCAAGTCAGAGAAGCCTT
CTGGAGGTCATGAGTGAATTTCCTTCTGCCAAGCCCCCACTTGGTGTCTT
TTTTGCAGCAATTGTCCCACGTTTGCAACCAAGATATTATTCAATTTCAT
CTTCTCCAAGGGTTGCACCATCTAGAATTCATGTTACCTGTGCTCTGGTT
TATGAGAAAACACCAACAGGACGTGTTCACAAAGGATTGTGCTCCACTTG
GATGAAGAATTCTTTGCCAATGGAGAAAAGCAATGACTGCAGCTGGGCAC
CCATTTTTGTTAGGCAATCAAACTTCAAACTCCCTGCAGATGCTAAAGTG
CCTATCATTATGATTGGCCCTGGCACTGGATTAGCTCCTTTCAGGGGTTT
CCTACAGGAAAGGTTTGCTCTGAAGGAAGCTGGAACAGAACTGGGACCCT
CTCTATTATTTTTTGGATGCAGGAACCGTAAGATGGATTACATTTATGAG
GATGAGCTCAACAACTTTGTTCAAAGTGGTGCACTTTCACAGTTGATTGT
TGCCTTCTCACGTGAGGGACCCATCAAGGAATATGTGCAGCATAAAATGA
TGGAGAAGTCTTGGGATATCTGGAACATGCTTTCTGAGGGAGCTTNACTT
GTATGTTGTGGTGA
back to top