FC931371

Overview
NameFC931371
Unique NameFC931371
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931371 vs. ExPASy Swiss-Prot
Match: CTR1_MOUSE (High affinity cationic amino acid transporter 1 OS=Mus musculus GN=Slc7a1 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.481e-53
Identity = 102/250 (40.80%), Postives = 156/250 (62.40%), Query Frame = 1
Query:    1 LLCVGIKESTIAQAIVTTANVLAMLFVIIAGSYLGFKTGWSGYEL--------------PTGYFPFGVNGMLAGSATVFFAFIGFDAVASTAEEVKNPQRDLPLGIGTALSICCALYMLVSIVIVGLVPYYEMDPDTPISSAFASHGMHWASYVITIGAVTALCSTLMGSILPQPRILMAMARDGLLPPFFSDVNKTTQVPVKSTIVTGIVAAALAFFMDVSALAGMVSVGTLLAFTMVAISVLILRYVP 708
            LL +G+KES +   I T  NVL + F++++G   G    W   E                 G+ PFG +G+L+G+AT F+AF+GFD +A+T EEVKNPQ+ +P+GI  +L IC   Y  VS  +  ++PY+ +D D+P+  AF   G   A Y + IG++ AL ++L+GS+ P PR++ AMA DGLL  F + +N  T+ PV +T+ +G +AA +AF  ++  L  ++S+GTLLA+++VA  VL+LRY P
Sbjct:  178 LLTLGVKESAMVNKIFTCINVLVLCFIVVSGFVKGSIKNWQLTEKNFSCNNNDTNVKYGEGGFMPFGFSGVLSGAATCFYAFVGFDCIATTGEEVKNPQKAIPVGIVASLLICFIAYFGVSAALTLMMPYFCLDIDSPLPGAFKHQGWEEAKYAVAIGSLCALSTSLLGSMFPMPRVIYAMAEDGLLFKFLAKINNRTKTPVIATVTSGAIAAVMAFLFELKDLVDLMSIGTLLAYSLVAACVLVLRYQP 427          
BLAST of FC931371 vs. ExPASy Swiss-Prot
Match: CTR2_XENLA (Low affinity cationic amino acid transporter 2 OS=Xenopus laevis GN=slc7a2 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.276e-52
Identity = 113/259 (43.63%), Postives = 162/259 (62.55%), Query Frame = 1
Query:    1 LLCVGIKESTIAQAIVTTANVLAMLFVIIAGSYLGFKTGW--------------SGYELPT---------GYFPFGVNGMLAGSATVFFAFIGFDAVASTAEEVKNPQRDLPLGIGTALSICCALYMLVSIVIVGLVPYYEMDPDTPISSAFASHGMHWASYVITIGAVTALCSTLMGSILPQPRILMAMARDGLLPPFFSDVNKTTQVPVKSTIVTGIVAAALAFFMDVSALAGMVSVGTLLAFTMVAISVLILRYVP 708
            LL  G+KEST    + T  N+L +LFVI +G   G    W              S + +           G+ PFG +G LAG+AT F+AF+GFD +A+T EEVKNPQ+ +PLGI  +LSIC   Y  VS  +  ++PY+ +D  +P+ +AF   G + A Y++ +G++ AL ++L+GS+ P PRIL AMARDGLL    S V+ + Q PV +TIV+G+VAA +AF  ++ AL  M+S+GTLLA+T+V+  VL+LRY P
Sbjct:  179 LLSFGVKESTAVNKVFTAINILVLLFVIASGCVTGNLKYWKMSKEDLWATKQSVSNHSIGNETGLDFGAGGFMPFGFSGTLAGAATCFYAFVGFDCIATTGEEVKNPQKSIPLGIVLSLSICFFAYFGVSASLTLMMPYHLLDSQSPLPAAFEYVGWNVAKYIVAVGSLCALTTSLLGSMFPMPRILFAMARDGLLFQPLSRVS-SRQSPVIATIVSGVVAALMAFLFNLKALVDMMSIGTLLAYTLVSTCVLLLRYQP 436          
BLAST of FC931371 vs. ExPASy Swiss-Prot
Match: CTR2_HUMAN (Low affinity cationic amino acid transporter 2 OS=Homo sapiens GN=SLC7A2 PE=1 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 3.713e-52
Identity = 107/258 (41.47%), Postives = 156/258 (60.47%), Query Frame = 1
Query:    1 LLCVGIKESTIAQAIVTTANVLAMLFVIIAGSYLGFKTGW------------SGYELPT----------GYFPFGVNGMLAGSATVFFAFIGFDAVASTAEEVKNPQRDLPLGIGTALSICCALYMLVSIVIVGLVPYYEMDPDTPISSAFASHGMHWASYVITIGAVTALCSTLMGSILPQPRILMAMARDGLLPPFFSDVNKTTQVPVKSTIVTGIVAAALAFFMDVSALAGMVSVGTLLAFTMVAISVLILRYVP 708
            LL  G+KES     + T  N+L +LFV++AG   G    W            S  E P+          G+ P+G  G LAG+AT F+AF+GFD +A+T EEV+NPQ+ +P+GI T+L +C   Y  VS  +  ++PYY +D  +P+  AF   G   A YV+  G++ AL ++L+GSI P PR++ AMA DGLL    + +N  T+ P+ +T+ +G VAA +AF  D+ AL  M+S+GTL+A+++VA  VLILRY P
Sbjct:  179 LLSFGVKESAWVNKVFTAVNILVLLFVMVAGFVKGNVANWKISEEFLKNISASAREPPSENGTSIYGAGGFMPYGFTGTLAGAATCFYAFVGFDCIATTGEEVRNPQKAIPIGIVTSLLVCFMAYFGVSAALTLMMPYYLLDEKSPLPVAFEYVGWGPAKYVVAAGSLCALSTSLLGSIFPMPRVIYAMAEDGLLFKCLAQINSKTKTPIIATLSSGAVAALMAFLFDLKALVDMMSIGTLMAYSLVAACVLILRYQP 436          
BLAST of FC931371 vs. ExPASy Swiss-Prot
Match: CTR2_DANRE (Low affinity cationic amino acid transporter 2 OS=Danio rerio GN=slc7a2 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.080e-51
Identity = 113/259 (43.63%), Postives = 154/259 (59.46%), Query Frame = 1
Query:    1 LLCVGIKESTIAQAIVTTANVLAMLFVIIAGSYLGFKTGWSGYELPT-----------------------GYFPFGVNGMLAGSATVFFAFIGFDAVASTAEEVKNPQRDLPLGIGTALSICCALYMLVSIVIVGLVPYYEMDPDTPISSAFASHGMHWASYVITIGAVTALCSTLMGSILPQPRILMAMARDGLLPPFFSDVNKTTQVPVKSTIVTGIVAAALAFFMDVSALAGMVSVGTLLAFTMVAISVLILRYVP 708
            LL  G+KES     I T  NVL ++FVII+G   G    W+  E                          G+FP+G  G LAG+AT F+AF+GFD +A+T EEVKNPQR +P+GI  +L +C   Y  VS  +  ++PYY +D  +P+  AF   G   A YV+  G++ AL ++L+GS+ P PRIL AMARDG+L  F S ++K  Q PV +T+  G  AA +AF  D+ AL  M+S+GTLLA+++VA  VLILRY P
Sbjct:  177 LLSFGVKESAWVNKIFTAVNVLVLMFVIISGFVKGDSLNWNISEESLVNITVVKRNISSAANVTSDYGAGGFFPYGFGGTLAGAATCFYAFVGFDCIATTGEEVKNPQRAIPIGIVVSLLVCFLAYFGVSAALTLMMPYYLLDEKSPLPLAFEYVGWGPAKYVVAAGSLCALSTSLLGSMFPLPRILFAMARDGVLFRFLSKLSK-RQSPVAATMAAGTTAAIMAFLFDLKALVDMMSIGTLLAYSLVAACVLILRYQP 434          
BLAST of FC931371 vs. ExPASy Swiss-Prot
Match: CTR2_RAT (Low affinity cationic amino acid transporter 2 OS=Rattus norvegicus GN=Slc7a2 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.411e-51
Identity = 110/258 (42.64%), Postives = 157/258 (60.85%), Query Frame = 1
Query:    1 LLCVGIKESTIAQAIVTTANVLAMLFVIIAGSYLGFKTGW------------SGYELPT----------GYFPFGVNGMLAGSATVFFAFIGFDAVASTAEEVKNPQRDLPLGIGTALSICCALYMLVSIVIVGLVPYYEMDPDTPISSAFASHGMHWASYVITIGAVTALCSTLMGSILPQPRILMAMARDGLLPPFFSDVNKTTQVPVKSTIVTGIVAAALAFFMDVSALAGMVSVGTLLAFTMVAISVLILRYVP 708
            LL  G+KES       T  N+L +LFV++AG   G    W            S  E P+          G+ P+G  G LAG+AT F+AF+GFD +A+T EEV+NPQ+ +P+GI T+L +C   Y  VS  +  ++PYY +D  +P+  AF   G   A YV+  G++ AL ++L+GS+ P PRIL AMARDGLL  F + V+K  Q PV +T+  G+++A +AF  D+ AL  M+S+GTL+A+++VA  VLILRY P
Sbjct:  179 LLSFGVKESAWVNKFFTAINILVLLFVMVAGFVKGNVANWKISEEFLKNISASAREPPSENGTSIYGAGGFMPYGFTGTLAGAATCFYAFVGFDCIATTGEEVRNPQKAIPIGIVTSLLVCFMAYFGVSAALTLMMPYYLLDEKSPLPVAFEYVGWGPAKYVVAAGSLCALSTSLLGSMFPLPRILFAMARDGLLFRFLARVSK-RQSPVAATMTAGVISAVMAFLFDLKALVDMMSIGTLMAYSLVAACVLILRYQP 435          
BLAST of FC931371 vs. ExPASy Swiss-Prot
Match: CTR1_RAT (High affinity cationic amino acid transporter 1 OS=Rattus norvegicus GN=Slc7a1 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.411e-51
Identity = 99/252 (39.29%), Postives = 156/252 (61.90%), Query Frame = 1
Query:    1 LLCVGIKESTIAQAIVTTANVLAMLFVIIAGSYLGFKTGWSGYELPT----------------GYFPFGVNGMLAGSATVFFAFIGFDAVASTAEEVKNPQRDLPLGIGTALSICCALYMLVSIVIVGLVPYYEMDPDTPISSAFASHGMHWASYVITIGAVTALCSTLMGSILPQPRILMAMARDGLLPPFFSDVNKTTQVPVKSTIVTGIVAAALAFFMDVSALAGMVSVGTLLAFTMVAISVLILRYVP 708
            LL +G+KES +   I T  NVL + F++++G   G    W   E  +                G+ PFG +G+L+G+AT F+AF+GFD +A+T EEVKNPQ+ +P+GI  +L IC   Y  VS  +  ++PY+ +D D+P+  AF   G   A Y + +G++ AL ++ +GS+ P PR++ AMA DGLL  F + +N  T+ P+ +T+ +G +AA +AF  ++  L  ++S+GTLLA+++VA  VL+LRY P
Sbjct:  178 LLTLGVKESAMVNKIFTCINVLVLCFIMVSGFVKGSIENWQLTENKSSPLCGNNDTNVKYGEGGFMPFGFSGVLSGAATCFYAFVGFDCIATTGEEVKNPQKAIPVGIVASLLICFIAYFGVSAALTLMMPYFCLDTDSPLPGAFKYRGWEEAKYAVAVGSLCALSTSPLGSMFPMPRVIYAMAEDGLLFKFLAKINDRTKTPIIATVTSGAIAAVMAFLFELKDLVDLMSIGTLLAYSLVAACVLVLRYQP 429          
BLAST of FC931371 vs. ExPASy Swiss-Prot
Match: CTR2_CHICK (Low affinity cationic amino acid transporter 2 OS=Gallus gallus GN=SLC7A2 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.843e-51
Identity = 109/259 (42.08%), Postives = 159/259 (61.39%), Query Frame = 1
Query:    1 LLCVGIKESTIAQAIVTTANVLAMLFVIIAGSYLGFKTGW-----------------SGYELPT------GYFPFGVNGMLAGSATVFFAFIGFDAVASTAEEVKNPQRDLPLGIGTALSICCALYMLVSIVIVGLVPYYEMDPDTPISSAFASHGMHWASYVITIGAVTALCSTLMGSILPQPRILMAMARDGLLPPFFSDVNKTTQVPVKSTIVTGIVAAALAFFMDVSALAGMVSVGTLLAFTMVAISVLILRYVP 708
            LL  G+KES     I T  N+L +LFV+I+G   G    W                 S Y+  T      G+ P+G  G LAG+AT F+AF+GFD +A+T EEV+NPQ+ +P+GI  +L +C   Y  VS  +  ++PYY +D  +P+  AFA  G   A YV+ +G++ AL ++L+GS+ P PRI+ AMARDGLL  F + V+K  Q P+ +T+  G+++A +AF  D+ AL  ++S+GTLLA+++VA  VLILRY P
Sbjct:  178 LLSFGVKESAWVNKIFTAINILVLLFVMISGFVKGDVDNWRISEEYLINLSEIAENFSSYKNVTSIYGSGGFMPYGFTGTLAGAATCFYAFVGFDCIATTGEEVRNPQKAIPIGIVVSLLVCFMAYFGVSAALTLMMPYYLLDEKSPLPVAFAYVGWGPAKYVVAVGSLCALSTSLLGSMFPLPRIVFAMARDGLLFSFLAKVSK-RQAPLLATLTAGVISAIMAFLFDLKALVDIMSIGTLLAYSLVATCVLILRYQP 435          
BLAST of FC931371 vs. ExPASy Swiss-Prot
Match: CTR1_HUMAN (High affinity cationic amino acid transporter 1 OS=Homo sapiens GN=SLC7A1 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.843e-51
Identity = 102/257 (39.69%), Postives = 157/257 (61.09%), Query Frame = 1
Query:    1 LLCVGIKESTIAQAIVTTANVLAMLFVIIAGSYLGFKTGWS---------------------GYELPTGYFPFGVNGMLAGSATVFFAFIGFDAVASTAEEVKNPQRDLPLGIGTALSICCALYMLVSIVIVGLVPYYEMDPDTPISSAFASHGMHWASYVITIGAVTALCSTLMGSILPQPRILMAMARDGLLPPFFSDVNKTTQVPVKSTIVTGIVAAALAFFMDVSALAGMVSVGTLLAFTMVAISVLILRYVP 708
            LL +G+KES +   I T  NVL + F++++G   G    W                      G     G+ PFG +G+L+G+AT F+AF+GFD +A+T EEVKNPQ+ +P+GI  +L IC   Y  VS  +  ++PY+ +D ++P+  AF   G   A Y + +G++ AL ++L+GS+ P PR++ AMA DGLL  F ++VN  T+ P+ +T+ +G VAA +AF  D+  L  ++S+GTLLA+++VA  VL+LRY P
Sbjct:  178 LLTLGVKESAMVNKIFTCINVLVLGFIMVSGFVKGSVKNWQLTEEDFGNTSGRLCLNNDTKEGKPGVGGFMPFGFSGVLSGAATCFYAFVGFDCIATTGEEVKNPQKAIPVGIVASLLICFIAYFGVSAALTLMMPYFCLDNNSPLPDAFKHVGWEGAKYAVAVGSLCALSASLLGSMFPMPRVIYAMAEDGLLFKFLANVNDRTKTPIIATLASGAVAAVMAFLFDLKDLVDLMSIGTLLAYSLVAACVLVLRYQP 434          
BLAST of FC931371 vs. ExPASy Swiss-Prot
Match: CTR3_HUMAN (Cationic amino acid transporter 3 OS=Homo sapiens GN=SLC7A3 PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.407e-51
Identity = 103/258 (39.92%), Postives = 159/258 (61.63%), Query Frame = 1
Query:    1 LLCVGIKESTIAQAIVTTANVLAMLFVIIAGSYLGFKTGWS----GYELPT---------------GYFPFGVNGMLAGSATVFFAFIGFDAVASTAEEVKNPQRDLPLGIGTALSICCALYMLVSIVIVGLVPYYEMDPDTPISSAFASHGMHWASYVITIGAVTALCSTLMGSILPQPRILMAMARDGLLPPFFSDVNKTTQVPVKSTIVTGIVAAALAFFMDVSALAGMVSVGTLLAFTMVAISVLILRYVPPDE 717
            LL +G  ES +   + T  N+L + FV+I+G   G    W      YEL                 G+ PFG  G+L G+AT F+AF+GFD +A+T EE +NPQR +P+GI  +LS+C   Y  VS  +  ++PYY++ P++P+  AF   G   A YV+ +G++ AL ++L+GS+ P PR++ AMA DGLL    + ++  T+ P+ +T+V+GI+AA +AF   ++ L  ++S+GTLLA+++V+I VLILRY P  E
Sbjct:  178 LLALGASESALVTKVFTGVNLLVLGFVMISGFVKGDVHNWKLTEEDYELAMAELNDTYSLGPLGSGGFVPFGFEGILRGAATCFYAFVGFDCIATTGEEAQNPQRSIPMGIVISLSVCFLAYFAVSSALTLMMPYYQLQPESPLPEAFLYIGWAPARYVVAVGSLCALSTSLLGSMFPMPRVIYAMAEDGLLFRVLARIHTGTRTPIIATVVSGIIAAFMAFLFKLTDLVDLMSIGTLLAYSLVSICVLILRYQPDQE 435          
BLAST of FC931371 vs. ExPASy Swiss-Prot
Match: CTR3_RAT (Cationic amino acid transporter 3 OS=Rattus norvegicus GN=Slc7a3 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.362e-51
Identity = 104/259 (40.15%), Postives = 160/259 (61.78%), Query Frame = 1
Query:    1 LLCVGIKESTIAQAIVTTANVLAMLFVIIAGSYLGFKTGWS----GYELPT---------------GYFPFGVNGMLAGSATVFFAFIGFDAVASTAEEVKNPQRDLPLGIGTALSICCALYMLVSIVIVGLVPYYEMDPDTPISSAFASHGMHWASYVITIGAVTALCSTLMGSILPQPRILMAMARDGLLPPFFSDVNKTTQVPVKSTIVTGIVAAALAFFMDVSALAGMVSVGTLLAFTMVAISVLILRYVPPDEV 720
            LL +G  ES +   + T  N+L + FVII+G   G    W      Y L                 G+ PFG+ G+L G+AT F+AF+GFD +A+T EE +NPQR +P+GI  +LSIC   Y  VS  +  ++PYY++ P++P+  AF   G   A Y++ IG++ AL ++L+GS+ P PR++ AMA DGLL    + V+  T  P+ +T+V+G++AA +AF  +++ L  ++S+GTLLA+++V+I VLILRY P  E+
Sbjct:  178 LLVLGANESGLVTKVFTGMNLLVLGFVIISGFIKGELRNWKLTKEDYCLTMSESNGTCSLDSMGSGGFMPFGLEGILRGAATCFYAFVGFDCIATTGEEAQNPQRSIPMGIVISLSICFLAYFGVSSALTLMMPYYKLQPESPLPEAFTYVGWEPARYLVAIGSLCALSTSLLGSMFPMPRVIYAMAEDGLLFRVLARVHNGTHTPIVATVVSGVIAAFMAFLFELTDLVDLMSIGTLLAYSLVSICVLILRYQPDQEM 436          
The following BLAST results are available for this feature:
BLAST of FC931371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
CTR1_MOUSE7.481e-5340.80High affinity cationic amino acid transporter 1 OS... [more]
CTR2_XENLA1.276e-5243.63Low affinity cationic amino acid transporter 2 OS=... [more]
CTR2_HUMAN3.713e-5241.47Low affinity cationic amino acid transporter 2 OS=... [more]
CTR2_DANRE1.080e-5143.63Low affinity cationic amino acid transporter 2 OS=... [more]
CTR2_RAT1.411e-5142.64Low affinity cationic amino acid transporter 2 OS=... [more]
CTR1_RAT1.411e-5139.29High affinity cationic amino acid transporter 1 OS... [more]
CTR2_CHICK1.843e-5142.08Low affinity cationic amino acid transporter 2 OS=... [more]
CTR1_HUMAN1.843e-5139.69High affinity cationic amino acid transporter 1 OS... [more]
CTR3_HUMAN2.407e-5139.92Cationic amino acid transporter 3 OS=Homo sapiens ... [more]
CTR3_RAT5.362e-5140.15Cationic amino acid transporter 3 OS=Rattus norveg... [more]

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Properties
Property NameValue
Genbank descriptionC34104D08EF PostHarvP1 Citrus clementina cDNA clone C34104D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931371 ID=FC931371; Name=FC931371; organism=Citrus clementina; type=EST; length=738bp
CTCCTGTGTGTGGGAATCAAGGAGAGTACCATTGCACAAGCTATTGTTAC
CACTGCCAATGTACTTGCTATGCTGTTTGTCATAATAGCCGGTAGTTATC
TGGGATTCAAGACAGGATGGTCTGGATATGAACTTCCTACTGGGTATTTC
CCCTTTGGGGTCAATGGGATGCTTGCTGGGTCTGCAACAGTCTTCTTTGC
ATTCATTGGTTTTGATGCAGTTGCCAGCACTGCTGAGGAGGTGAAAAATC
CTCAACGAGATTTGCCATTGGGTATAGGAACTGCACTGTCTATTTGTTGT
GCATTATACATGCTGGTCTCCATTGTCATTGTTGGTCTGGTACCTTATTA
TGAAATGGATCCTGATACTCCAATCTCCTCTGCATTTGCAAGCCATGGGA
TGCACTGGGCTTCATATGTGATAACTATTGGAGCTGTTACTGCACTTTGC
TCAACATTAATGGGTTCAATTCTTCCTCAGCCACGAATTCTGATGGCAAT
GGCTAGAGATGGATTGTTGCCACCATTCTTTTCAGATGTTAATAAAACTA
CACAAGTTCCAGTCAAGAGTACTATTGTGACTGGTATTGTTGCCGCAGCA
TTGGCATTTTTCATGGATGTTTCAGCATTGGCTGGAATGGTCAGTGTGGG
GACACTTCTTGCTTTTACTATGGTGGCGATTTCTGTATTGATTCTCAGAT
ATGTCCCCCCCGATGAGGTGCCAGTTCCCATCACACTT
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