FC931374
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931374 vs. ExPASy Swiss-Prot
Match: SUCA_ORYSJ (Probable succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Oryza sativa subsp. japonica GN=Os07g0577700 PE=1 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 6.332e-72 Identity = 93/111 (83.78%), Postives = 97/111 (87.39%), Query Frame = 1 Query: 367 EEGWTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRGGIV 699 ++G TEHLGLPVFNSVAEAKAETKANASVIYVPPPF LDLVVCITEGIPQHDMV+VKAALN+QSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGR GIV Sbjct: 76 KKGGTEHLGLPVFNSVAEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVKVKAALNKQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIV 186 HSP 2 Score: 102.449 bits (254), Expect = 6.332e-72 Identity = 50/68 (73.53%), Postives = 59/68 (86.76%), Query Frame = 2 Query: 179 LSTSAAPAAHSRYYGSSAAAS-QPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG 379 L ++A+ H+R + ++AAA+ PAVFVDK+TRVICQGITGKNGTFHTEQAIEYGT MVGGVTPKKGG Sbjct: 12 LGSAASRLLHARGFAAAAAAAPSPAVFVDKSTRVICQGITGKNGTFHTEQAIEYGTTMVGGVTPKKGG 79
BLAST of FC931374 vs. ExPASy Swiss-Prot
Match: SUCA1_ARATH (Succinyl-CoA ligase [GDP-forming] subunit alpha-1, mitochondrial OS=Arabidopsis thaliana GN=At5g08300 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 4.043e-68 Identity = 89/111 (80.18%), Postives = 94/111 (84.68%), Query Frame = 1 Query: 367 EEGWTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRGGIV 699 ++G TEHLGLPVFNSVAEAKA+TKANASVIYVP PF LDL+VCITEGIPQHDMVRVK ALN QSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPG+ GIV Sbjct: 91 KKGGTEHLGLPVFNSVAEAKADTKANASVIYVPAPFAAAAIMEGIEAELDLIVCITEGIPQHDMVRVKHALNSQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIV 201 HSP 2 Score: 98.2117 bits (243), Expect = 4.043e-68 Identity = 59/97 (60.82%), Postives = 66/97 (68.04%), Query Frame = 2 Query: 95 MARQALAKLIGSIG--CRRPSTASSVSHYRLSTSAAPAAHSRYYGSSAAASQPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG 379 M+RQ +A+LIGS+ RR ST S + S SR + S AVFVDKNTRV+CQGITGKNGTFHTEQAIEYGTKMV GVTPKKGG Sbjct: 1 MSRQ-VARLIGSLSSKARRCSTGGS-EVFPSCQSLTSLTQSRSFASDPHPPA-AVFVDKNTRVLCQGITGKNGTFHTEQAIEYGTKMVAGVTPKKGG 94
BLAST of FC931374 vs. ExPASy Swiss-Prot
Match: SUCA2_ARATH (Succinyl-CoA ligase [GDP-forming] subunit alpha-2, mitochondrial OS=Arabidopsis thaliana GN=At5g23250 PE=1 SV=2) HSP 1 Score: 184.111 bits (466), Expect = 6.877e-68 Identity = 90/111 (81.08%), Postives = 95/111 (85.59%), Query Frame = 1 Query: 367 EEGWTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRGGIV 699 ++G TEHLGLPVFN+VAEAKAETKANASVIYVP PF LDL+VCITEGIPQHDMVRVKAALN QSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPG+ GIV Sbjct: 86 KKGGTEHLGLPVFNTVAEAKAETKANASVIYVPAPFAAAAIMEGLAAELDLIVCITEGIPQHDMVRVKAALNSQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIV 196 HSP 2 Score: 95.1301 bits (235), Expect = 6.877e-68 Identity = 56/100 (56.00%), Postives = 66/100 (66.00%), Query Frame = 2 Query: 95 MARQALAKLIGSI-----GCRRPSTASSVSHYRLSTSAAPAAHSRYYGSSAAASQPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG 379 M+RQ + +L+GS+ GC S S++ SR +G++ AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMV GVTPKKGG Sbjct: 1 MSRQ-VTRLLGSLRHSGGGCSGSSKVCSLTSL---------VQSRSFGTTPPPPA-AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVAGVTPKKGG 89
BLAST of FC931374 vs. ExPASy Swiss-Prot
Match: SUCA_RAT (Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Rattus norvegicus GN=Suclg1 PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 9.415e-55 Identity = 77/110 (70.00%), Postives = 83/110 (75.45%), Query Frame = 1 Query: 370 EGWTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRGGIV 699 +G +HLGLPVFN+V EAK +T A ASVIYVPPPF + LVVCITEGIPQ DMVRVK L RQ KTRLIGPNCPGII PGECKIGIMPG+IHK GR GIV Sbjct: 90 KGGKKHLGLPVFNTVKEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHKLTRQGKTRLIGPNCPGIINPGECKIGIMPGHIHKKGRIGIV 199 HSP 2 Score: 80.4925 bits (197), Expect = 9.415e-55 Identity = 34/51 (66.67%), Postives = 43/51 (84.31%), Query Frame = 2 Query: 227 SAAASQPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG 379 S AS+ +++DKNT+VICQG TGK GTFH++QA+EYGTK+VGG TP KGG Sbjct: 42 SYTASRKNIYIDKNTKVICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGG 92
BLAST of FC931374 vs. ExPASy Swiss-Prot
Match: SUCA_MOUSE (Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Mus musculus GN=Suclg1 PE=1 SV=4) HSP 1 Score: 152.14 bits (383), Expect = 4.621e-54 Identity = 75/110 (68.18%), Postives = 82/110 (74.55%), Query Frame = 1 Query: 370 EGWTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRGGIV 699 +G +HLGLPVFN+V EAK +T A ASVIYVPPPF + LVVCITEGIPQ DMVRVK L RQ TRLIGPNCPG+I PGECKIGIMPG+IHK GR GIV Sbjct: 90 KGGQKHLGLPVFNTVKEAKEKTGATASVIYVPPPFAAAAINEAIDAEIPLVVCITEGIPQQDMVRVKHRLTRQGTTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIV 199 HSP 2 Score: 80.8777 bits (198), Expect = 4.621e-54 Identity = 37/77 (48.05%), Postives = 53/77 (68.83%), Query Frame = 2 Query: 149 STASSVSHYRLSTSAAPAAHSRYYGSSAAASQPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG 379 S++S ++ RL + + S AS+ +++DKNT++ICQG TGK GTFH++QA+EYGTK+VGG TP KGG Sbjct: 16 SSSSGLAAARLLSRTFLLQQNGIRHGSYTASRKHIYIDKNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGG 92
BLAST of FC931374 vs. ExPASy Swiss-Prot
Match: SUCA_DICDI (Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=scsA PE=1 SV=3) HSP 1 Score: 155.221 bits (391), Expect = 4.626e-54 Identity = 75/110 (68.18%), Postives = 86/110 (78.18%), Query Frame = 1 Query: 370 EGWTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRGGIV 699 +G +HL LPVFN+V EAK T ANA+VIYVPPP ++LVVCITEGIPQ DMV+VK LN+Q+KTRLIGPNCPGIIKPGECKIGIMPG+IHKPG+ GIV Sbjct: 62 KGGQKHLDLPVFNTVKEAKEATGANATVIYVPPPHAAAAIKEAIDAEMELVVCITEGIPQQDMVKVKYLLNKQNKTRLIGPNCPGIIKPGECKIGIMPGHIHKPGKIGIV 171 HSP 2 Score: 77.7962 bits (190), Expect = 4.626e-54 Identity = 33/57 (57.89%), Postives = 46/57 (80.70%), Query Frame = 2 Query: 209 SRYYGSSAAASQPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG 379 +R +G +++P+V ++K+T+VICQG TG GTFH++QAIEYGT MVGGV+P KGG Sbjct: 8 ARNFGKRFFSTKPSVLINKHTKVICQGFTGNQGTFHSKQAIEYGTNMVGGVSPGKGG 64
BLAST of FC931374 vs. ExPASy Swiss-Prot
Match: SUCA_BOVIN (Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Bos taurus GN=SUCLG1 PE=2 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 2.268e-53 Identity = 75/110 (68.18%), Postives = 82/110 (74.55%), Query Frame = 1 Query: 370 EGWTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRGGIV 699 +G HLGLPVFN+V EAK +T A ASVIYVPPPF + LVVCITEGIPQ DMVRVK L RQ KTRL+GPNCPG+I PGECKIGIMPG+IHK GR GIV Sbjct: 90 KGGKTHLGLPVFNTVKEAKEQTGATASVIYVPPPFAVAAIDEAIEAEVSLVVCITEGIPQQDMVRVKHKLLRQGKTRLVGPNCPGVINPGECKIGIMPGHIHKKGRVGIV 199 HSP 2 Score: 77.7962 bits (190), Expect = 2.268e-53 Identity = 37/77 (48.05%), Postives = 52/77 (67.53%), Query Frame = 2 Query: 149 STASSVSHYRLSTSAAPAAHSRYYGSSAAASQPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG 379 S +S ++ RL + A + S S+ ++VD+NT++ICQG TGK GTFH++QA+EYGTK+VGG TP KGG Sbjct: 16 SGSSGLAAARLLSRAFLLQQNGIRHCSYTTSRKHLYVDRNTKIICQGFTGKQGTFHSQQALEYGTKLVGGTTPGKGG 92
BLAST of FC931374 vs. ExPASy Swiss-Prot
Match: SUCA_PIG (Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Sus scrofa GN=SUCLG1 PE=1 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 2.268e-53 Identity = 76/110 (69.09%), Postives = 82/110 (74.55%), Query Frame = 1 Query: 370 EGWTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRGGIV 699 +G HLGLPVFN+V EAK +T A ASVIYVPPPF + LVVCITEGIPQ DMVRVK L RQ KTRLIGPNCPG+I PGECKIGIMPG+IHK GR GIV Sbjct: 90 KGGKTHLGLPVFNTVKEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGIPQQDMVRVKHRLLRQGKTRLIGPNCPGVINPGECKIGIMPGHIHKKGRIGIV 199 HSP 2 Score: 78.1814 bits (191), Expect = 2.268e-53 Identity = 34/51 (66.67%), Postives = 42/51 (82.35%), Query Frame = 2 Query: 227 SAAASQPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG 379 S AS+ ++VDKNT+VICQG TGK GTFH++QA+EYGT +VGG TP KGG Sbjct: 42 SYTASRKHLYVDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGG 92
BLAST of FC931374 vs. ExPASy Swiss-Prot
Match: SUCA_DROME (Succinyl-CoA ligase [GDP-forming] subunit alpha, mitochondrial OS=Drosophila melanogaster GN=Scsalpha PE=2 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 2.634e-48 Identity = 69/111 (62.16%), Postives = 84/111 (75.68%), Query Frame = 1 Query: 367 EEGWTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRGGIV 699 ++G T+HLGLPVF SVAEAK T +A+VIYVPPP + L+VCITEG+PQHDMV+VK AL QSK+RL+GPNCPGII P +CKIGIMPG+IHK G+ G+V Sbjct: 71 KKGGTQHLGLPVFASVAEAKKATDPHATVIYVPPPGAAAAIIEALEAEIPLIVCITEGVPQHDMVKVKHALISQSKSRLVGPNCPGIIAPEQCKIGIMPGHIHKRGKIGVV 181 HSP 2 Score: 69.707 bits (169), Expect = 2.634e-48 Identity = 28/38 (73.68%), Postives = 36/38 (94.74%), Query Frame = 2 Query: 266 NTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGG 379 ++RVICQG TGK GTFH++QA+EYGTK+VGG++PKKGG Sbjct: 37 DSRVICQGFTGKQGTFHSQQALEYGTKLVGGISPKKGG 74
BLAST of FC931374 vs. ExPASy Swiss-Prot
Match: SUCD_COXBU (Succinyl-CoA ligase [ADP-forming] subunit alpha OS=Coxiella burnetii GN=sucD PE=3 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 1.076e-46 Identity = 63/110 (57.27%), Postives = 77/110 (70.00%), Query Frame = 1 Query: 370 EGWTEHLGLPVFNSVAEAKAETKANASVIYVPPPFXXXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRGGIV 699 +G HLGLP+FNSV EA ET A+A++I+VP PF + LVVCITEGIP DM+ VKA L + R+IGPNCPG+I PGECKIGIMPG+IH+ G+ GIV Sbjct: 43 KGGQSHLGLPIFNSVHEAVEETSADATMIFVPAPFCKDSIIEAVDAGVRLVVCITEGIPVLDMLEVKAYLRQHPDVRMIGPNCPGVITPGECKIGIMPGHIHQRGKVGIV 152 HSP 2 Score: 78.5666 bits (192), Expect = 1.076e-46 Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 2 Query: 248 AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGLS 385 ++ +DK TRV+CQG TGK GTFH+EQAIEYGT+MVGGVTP KGG S Sbjct: 2 SILIDKETRVLCQGFTGKQGTFHSEQAIEYGTQMVGGVTPGKGGQS 47 The following BLAST results are available for this feature:
BLAST of FC931374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931374 ID=FC931374; Name=FC931374; organism=Citrus clementina; type=EST; length=736bpback to top |