FC931393

Overview
NameFC931393
Unique NameFC931393
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length716
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15176 contig Ccv1_Contig15176:8..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931393 vs. ExPASy Swiss-Prot
Match: BI1_ARATH (Bax inhibitor 1 OS=Arabidopsis thaliana GN=BI-1 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 2.228e-72
Identity = 82/130 (63.08%), Postives = 101/130 (77.69%), Query Frame = 2
Query:  326 KRKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVQHAL 715
            + +KR+SLL  +A+ +GAS+GPLI +AI +DPSILI+AFVGT +AF CFS AAM+ARRREY                  FASSIFGGS +IFKFELYFGLL+FVGY+VVDTQ+IIEKAH GD+DYV+H+L
Sbjct:   85 EHQKRLSLLFVSAVLEGASVGPLIKVAIDVDPSILITAFVGTAIAFVCFSAAAMLARRREYLYLGGLLSSGLSMLMWLQFASSIFGGSASIFKFELYFGLLIFVGYMVVDTQEIIEKAHLGDMDYVKHSL 214          

HSP 2 Score: 125.946 bits (315), Expect = 2.228e-72
Identity = 58/88 (65.91%), Postives = 71/88 (80.68%), Query Frame = 1
Query:   79 MDAFSSYFESRNGEARW--ESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNIGGLLTVFAMIGSMVWLLATPSYEEKK 336
            MDAFSS+F+S+ G   W  +SLKNF QISP VQ+HLK+VYL+LCCALVASA G YLH+LWNIGG+LT    IG+M+WLL+ P YE +K
Sbjct:    1 MDAFSSFFDSQPGSRSWSYDSLKNFRQISPAVQNHLKRVYLTLCCALVASAFGAYLHVLWNIGGILTTIGCIGTMIWLLSCPPYEHQK 88          
BLAST of FC931393 vs. ExPASy Swiss-Prot
Match: BI1_ORYSJ (Bax inhibitor 1 OS=Oryza sativa subsp. japonica GN=BI1 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.683e-36
Identity = 75/137 (54.74%), Postives = 98/137 (71.53%), Query Frame = 2
Query:  305 FSQPLVMKRKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVQHAL 715
            FS P V + +KR  +L+A AL +GAS+GPLI LA+  D SIL++AFVGT +AF CF+ AA+VA+RREY                  FA+SIFG ST  F FE+YFGLL+F+GY+V DTQ+IIE+AH GD+DY++HAL
Sbjct:   80 FSVP-VFEERKRFGILLAAALLEGASVGPLIKLAVDFDSSILVTAFVGTAIAFGCFTCAAIVAKRREYLYLGGLLSSGLSILLWLQFAASIFGHSTGSFMFEVYFGLLIFLGYMVYDTQEIIERAHHGDMDYIKHAL 215          

HSP 2 Score: 97.8265 bits (242), Expect = 6.005e-20
Identity = 49/89 (55.06%), Postives = 61/89 (68.54%), Query Frame = 1
Query:   79 MDAFSSYFESRNGEAR---WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNIGGLLTVFAMIGSMVWLLATPSYEEKK 336
            MDAF S   +    A    ++SLKNF QISP VQSHLK VYL+LC AL ASA G YLH+  NIGG+LT+   +GS+ WL + P +EE+K
Sbjct:    1 MDAFYSTSSAYGAAASGWGYDSLKNFRQISPAVQSHLKLVYLTLCVALAASAVGAYLHVALNIGGMLTMLGCVGSIAWLFSVPVFEERK 89          
BLAST of FC931393 vs. ExPASy Swiss-Prot
Match: BI1_BOVIN (Bax inhibitor 1 OS=Bos taurus GN=TMBIM6 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.089e-31
Identity = 52/128 (40.62%), Postives = 74/128 (57.81%), Query Frame = 2
Query:  332 KKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVQHAL 715
            +KR+ LL   A   G  +GP +DL I I+PSIL +AF+GT + F CF+++A+ ARRR Y                     ++F GS  +F+  LY GL+V  G+++ DTQ IIEKA  GD DY+ H +
Sbjct:   82 QKRLGLLAGFAFLTGVGLGPALDLCIAINPSILPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSAMSLMLLSSL-GNLFFGSVWLFQANLYMGLVVMCGFVLFDTQLIIEKAENGDKDYIWHCV 208          

HSP 2 Score: 57.7658 bits (138), Expect = 2.089e-31
Identity = 26/73 (35.62%), Postives = 43/73 (58.90%), Query Frame = 1
Query:  127 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATPSYEEKKE 339
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++ +    GLL+    +G M+WL+ATP   E ++
Sbjct:   10 FDALFKFSHITPSTQQHLKKVYASFALCMFVAAAGAYIHVVTHFIQAGLLSALGSLGLMIWLMATPHSHETEQ 82          
BLAST of FC931393 vs. ExPASy Swiss-Prot
Match: BI1_PIG (Bax inhibitor 1 OS=Sus scrofa GN=TMBIM6 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.612e-31
Identity = 52/128 (40.62%), Postives = 74/128 (57.81%), Query Frame = 2
Query:  332 KKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVQHAL 715
            +KR+ LL   A   G  +GP +DL I I+PSIL +AF+GT + F CF+++A+ ARRR Y                     ++F GS  +F+  LY GL+V  G+++ DTQ IIEKA  GD DY+ H +
Sbjct:   82 QKRLGLLAGFAFLTGVGLGPALDLCIAINPSILPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSAMSLMVLSSL-GNLFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAENGDKDYIWHCV 208          

HSP 2 Score: 57.3806 bits (137), Expect = 4.612e-31
Identity = 26/73 (35.62%), Postives = 42/73 (57.53%), Query Frame = 1
Query:  127 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATPSYEEKKE 339
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++      GLL+    +G M+WL+ATP   E ++
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGSLGLMIWLMATPHSHETEQ 82          
BLAST of FC931393 vs. ExPASy Swiss-Prot
Match: BI1_MOUSE (Bax inhibitor 1 OS=Mus musculus GN=Tmbim6 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.006e-31
Identity = 52/128 (40.62%), Postives = 74/128 (57.81%), Query Frame = 2
Query:  332 KKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVQHAL 715
            +KR+ LL   A   G  +GP ++L I ++PSIL +AF+GT + F CFS++A+ ARRR Y                     ++F GS  +F+  LY GLLV  G+++ DTQ IIEKA  GD DY+ H +
Sbjct:   82 QKRLGLLAGFAFLTGVGLGPALELCIAVNPSILPTAFMGTAMIFTCFSLSALYARRRSYLFLGGILMSAMSLMLLSSL-GNLFFGSIWLFQANLYLGLLVMCGFVLFDTQLIIEKAEHGDKDYIWHCV 208          

HSP 2 Score: 55.4546 bits (132), Expect = 6.006e-31
Identity = 25/73 (34.25%), Postives = 42/73 (57.53%), Query Frame = 1
Query:  127 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATPSYEEKKE 339
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++ +    GLL+    +  M+WL+ATP   E ++
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLALMIWLMATPHSHETEQ 82          
BLAST of FC931393 vs. ExPASy Swiss-Prot
Match: BI1_RAT (Bax inhibitor 1 OS=Rattus norvegicus GN=Tmbim6 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.427e-29
Identity = 53/128 (41.41%), Postives = 74/128 (57.81%), Query Frame = 2
Query:  332 KKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVQHAL 715
            +KR+ LL   A   G  +GP ++L I I+PSIL +AF+GT + F CFS++A+ ARRR Y                     ++F GS  +F+  LY GLLV  G+++ DTQ IIEKA  GD DY+ H +
Sbjct:   82 QKRLGLLAGFAFLTGVGLGPALELCIAINPSILPTAFMGTAMIFTCFSLSALYARRRSYLFLGGILMSAMSLMFVSSL-GNLFFGSIWLFQANLYMGLLVMCGFVLFDTQLIIEKAEHGDKDYIWHCI 208          

HSP 2 Score: 50.0618 bits (118), Expect = 1.427e-29
Identity = 24/73 (32.88%), Postives = 40/73 (54.79%), Query Frame = 1
Query:  127 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATPSYEEKKE 339
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++      GLL+    +  M+ L+ATP   E ++
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGALALMICLMATPHSHETEQ 82          
BLAST of FC931393 vs. ExPASy Swiss-Prot
Match: BI1_HUMAN (Bax inhibitor 1 OS=Homo sapiens GN=TMBIM6 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.427e-29
Identity = 49/128 (38.28%), Postives = 73/128 (57.03%), Query Frame = 2
Query:  332 KKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVQHAL 715
            +KR+ LL   A   G  +GP ++  I ++PSIL +AF+GT + F CF+++A+ ARRR Y                     ++F GS  +F+  LY GL+V  G+++ DTQ IIEKA  GD DY+ H +
Sbjct:   82 QKRLGLLAGFAFLTGVGLGPALEFCIAVNPSILPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSALSLLLLSSL-GNVFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAEHGDQDYIWHCI 208          

HSP 2 Score: 54.299 bits (129), Expect = 1.427e-29
Identity = 25/73 (34.25%), Postives = 42/73 (57.53%), Query Frame = 1
Query:  127 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATPSYEEKKE 339
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++ +    GLL+    +  M+WL+ATP   E ++
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHMVTHFIQAGLLSALGSLILMIWLMATPHSHETEQ 82          
BLAST of FC931393 vs. ExPASy Swiss-Prot
Match: BI1_PONAB (Bax inhibitor 1 OS=Pongo abelii GN=TMBIM6 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.858e-29
Identity = 49/128 (38.28%), Postives = 73/128 (57.03%), Query Frame = 2
Query:  332 KKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVQHAL 715
            +KR+ LL   A   G  +GP ++  I ++PSIL +AF+GT + F CF+++A+ ARRR Y                     ++F GS  +F+  LY GL+V  G+++ DTQ IIEKA  GD DY+ H +
Sbjct:   82 QKRLGLLAGFAFLTGVGLGPALEFCITVNPSILPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSALSLLLLSSL-GNVFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAEHGDQDYIWHCI 208          

HSP 2 Score: 53.9138 bits (128), Expect = 1.858e-29
Identity = 25/73 (34.25%), Postives = 42/73 (57.53%), Query Frame = 1
Query:  127 WESLKNFHQISPVVQSHLKQVYLSLCCALVASATGVYLHLLWNI--GGLLTVFAMIGSMVWLLATPSYEEKKE 339
            +++L  F  I+P  Q HLK+VY S    +  +A G Y+H++ +    GLL+    +  M+WL+ATP   E ++
Sbjct:   10 FDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLILMIWLMATPHSHETEQ 82          
BLAST of FC931393 vs. ExPASy Swiss-Prot
Match: BI1_PAROL (Probable Bax inhibitor 1 OS=Paralichthys olivaceus GN=tmbim6 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.520e-20
Identity = 50/140 (35.71%), Postives = 76/140 (54.29%), Query Frame = 2
Query:  296 WFGFSQPLVMKRKKRVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVQHAL 715
            W   +       KKR+++L   A   G  + P +D  I I+PSI+++AF+GT + F CF+++A+ A+RR Y                    +  F GS  +FK  +Y GLL+  G+++ DTQ IIEKA  GD DYV H++
Sbjct:   70 WLAMTPHNSETEKKRLAILAGFAFLTGVGLCPTLDFVIAINPSIIVTAFLGTSVIFVCFTLSALYAKRRSYLFLGGTLMSGLSILFLMSMMNMFF-GSVMLFKAHMYLGLLIMCGFVLXDTQLIIEKAENGDKDYVWHSV 208          
BLAST of FC931393 vs. ExPASy Swiss-Prot
Match: BI1_DROME (Probable Bax inhibitor 1 OS=Drosophila melanogaster GN=CG7188 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.294e-14
Identity = 40/126 (31.75%), Postives = 65/126 (51.59%), Query Frame = 2
Query:  338 RVSLLMATALFKGASIGPLIDLAIQIDPSILISAFVGTGLAFACFSVAAMVARRREYXXXXXXXXXXXXXXXXXHFASSIFGGSTAIFKFELYFGLLVFVGYIVVDTQDIIEKAHFGDLDYVQHAL 715
            R+ +L A     G ++GPL+     I+P+I++SA  GT + F   S++A++A + +Y                    + +F  S  +   +LY G+ V   +IV DTQ+I+EK   G+ D VQHAL
Sbjct:   87 RLGMLYAFGFCSGQTLGPLLGYICSINPAIILSALTGTFVTFISLSLSALLAEQGKYLYLGGMLVSVINTMALLSLFNMVF-KSYFVQVTQLYVGVFVMAAFIVYDTQNIVEKCRNGNRDVVQHAL 211          

HSP 2 Score: 27.7202 bits (60), Expect = 8.294e-14
Identity = 17/62 (27.42%), Postives = 31/62 (50.00%), Query Frame = 1
Query:  160 PVVQSHLKQVYLSLCCALVASATGVYLHLLWNIGGLLTVFAMIGSMVWLLATPSYEEKKEGF 345
            P V+ HL +VY+ L     A+A G  L +   +   L V A + ++V +L    Y++  + +
Sbjct:   25 PYVREHLSKVYMVLGSTAAATAMGAMLQMRDFLD--LGVLAAVATLVLVLGLHFYKDDGKNY 84          
The following BLAST results are available for this feature:
BLAST of FC931393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
BI1_ARATH2.228e-7263.08Bax inhibitor 1 OS=Arabidopsis thaliana GN=BI-1 PE... [more]
BI1_ORYSJ2.683e-3654.74Bax inhibitor 1 OS=Oryza sativa subsp. japonica GN... [more]
BI1_BOVIN2.089e-3140.63Bax inhibitor 1 OS=Bos taurus GN=TMBIM6 PE=2 SV=1[more]
BI1_PIG4.612e-3140.63Bax inhibitor 1 OS=Sus scrofa GN=TMBIM6 PE=2 SV=1[more]
BI1_MOUSE6.006e-3140.63Bax inhibitor 1 OS=Mus musculus GN=Tmbim6 PE=2 SV=... [more]
BI1_RAT1.427e-2941.41Bax inhibitor 1 OS=Rattus norvegicus GN=Tmbim6 PE=... [more]
BI1_HUMAN1.427e-2938.28Bax inhibitor 1 OS=Homo sapiens GN=TMBIM6 PE=1 SV=... [more]
BI1_PONAB1.858e-2938.28Bax inhibitor 1 OS=Pongo abelii GN=TMBIM6 PE=2 SV=... [more]
BI1_PAROL3.520e-2035.71Probable Bax inhibitor 1 OS=Paralichthys olivaceus... [more]
BI1_DROME8.294e-1431.75Probable Bax inhibitor 1 OS=Drosophila melanogaste... [more]
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Properties
Property NameValue
Genbank descriptionC34104F06EF PostHarvP1 Citrus clementina cDNA clone C34104F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931393 ID=FC931393; Name=FC931393; organism=Citrus clementina; type=EST; length=716bp
GGGATCGACTCCATCTGAATTTTCTCTTGCAATTTTCTCGAGTTTTCTTT
TTCGGACAAGCAACGTCAATAATCAAGAATGGATGCTTTCTCTTCCTACT
TCGAGTCTCGTAACGGCGAAGCCCGCTGGGAGTCCTTGAAAAACTTTCAC
CAGATCTCTCCCGTCGTCCAGTCTCACCTTAAGCAGGTTTATCTGTCATT
ATGCTGTGCACTGGTGGCATCAGCCACTGGAGTCTACCTCCATCTCCTCT
GGAACATTGGTGGCTTACTTACGGTTTTTGCAATGATTGGATCAATGGTT
TGGCTTCTCGCAACCCCTAGTTATGAAGAGAAAAAAGAGGGTTTCTCTGC
TCATGGCTACCGCTCTCTTTAAAGGTGCATCAATTGGTCCTTTGATTGAT
CTCGCCATTCAAATTGACCCAAGCATTCTGATATCTGCATTTGTGGGAAC
CGGGCTGGCTTTCGCTTGTTTTTCTGTAGCTGCCATGGTTGCAAGGCGGA
GAGAGTATCTCTATCTTGGTGGCTTGCTTTCATCAGGCCTGTCCATGCTT
CTTTGGTTGCATTTTGCTTCCTCTATCTTTGGTGGTTCAACAGCTATCTT
CAAGTTTGAGTTATACTTTGGGCTGTTGGTGTTTGTTGGCTACATCGTGG
TGGATACCCAGGATATAATTGAGAAAGCTCACTTTGGAGACTTGGATTAT
GTNCAGCATGCCCTGA
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