FC931414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 200.29 bits (508), Expect = 8.279e-51 Identity = 96/112 (85.71%), Postives = 106/112 (94.64%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCCST 337 D+ESFNNVKQWL+EIDRYASDNVNKLLVGNK DLT N+ + YETAKAFADEIGIPFMETSAKD+T VEQAFMAM+ASIK+RMASQP+ NNARPPTVQI+GQPVAQK+GCCST Sbjct: 92 DEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPPTVQIRGQPVAQKNGCCST 203
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.726e-48 Identity = 95/112 (84.82%), Postives = 104/112 (92.86%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCCST 337 DQESFNNVKQWLNEIDRYASDNVNKLLVGNK DLTANKVV+ ETAKAFADE+GIPFMETSAK++T V+QAFMAMAASIKDRMASQP+ NARP TVQI+GQPV QK+ CCS+ Sbjct: 92 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANARPATVQIRGQPVNQKTSCCSS 203
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 3.047e-45 Identity = 86/111 (77.48%), Postives = 98/111 (88.29%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCCS 334 DQESFNNVKQWLNEIDRYAS+NVNKLLVGNKCDL N+VVSYE KA ADEIGIPF+ETSAKD+T VE+AFM MA IK+RMASQP+ N ++P TVQ++GQPVAQ+S CCS Sbjct: 92 DQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPATVQMRGQPVAQQSSCCS 202
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.038e-38 Identity = 80/111 (72.07%), Postives = 90/111 (81.08%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQ-IKGQPVAQKSGCC 331 DQESFNNVKQWLNEIDRYAS+NVNKLLVGNK DLT+ KVV Y AKAFADEIGIPF+ETSAK++T VEQAFM MAA IK+RMASQP A P V+ +G+P+ KS C Sbjct: 92 DQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPTKAGGPVVRPQEGKPINSKSSSC 202
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.980e-36 Identity = 78/111 (70.27%), Postives = 88/111 (79.28%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQ-IKGQPVAQKSGCC 331 DQESFNNVKQWL EIDRYAS+NVNKLLVGNK DLT KVV Y+ AKAFADEIGIPF+ETSAK++T VEQAFM MAA IK+RMASQP P V+ +G+P+ KS C Sbjct: 92 DQESFNNVKQWLAEIDRYASENVNKLLVGNKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPVPPKPGGPVVRPTEGKPINNKSSSC 202
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 2.859e-35 Identity = 73/110 (66.36%), Postives = 82/110 (74.55%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 DQESFNNVKQWL EIDRYAS+NVNKLLVGNKCDLT KVV Y TAK FAD +GIPF+ETSAK++T VEQ+FM MAA IK RM + A V+I+ PV Q G C Sbjct: 95 DQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC 204
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 2.859e-35 Identity = 73/110 (66.36%), Postives = 82/110 (74.55%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 DQESFNNVKQWL EIDRYAS+NVNKLLVGNKCDLT KVV Y TAK FAD +GIPF+ETSAK++T VEQ+FM MAA IK RM + A V+I+ PV Q G C Sbjct: 95 DQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC 204
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 2.859e-35 Identity = 73/110 (66.36%), Postives = 82/110 (74.55%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 DQESFNNVKQWL EIDRYAS+NVNKLLVGNKCDLT KVV Y TAK FAD +GIPF+ETSAK++T VEQ+FM MAA IK RM + A V+I+ PV Q G C Sbjct: 95 DQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC 204
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 2.859e-35 Identity = 73/110 (66.36%), Postives = 82/110 (74.55%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 DQESFNNVKQWL EIDRYAS+NVNKLLVGNKCDLT KVV Y TAK FAD +GIPF+ETSAK++T VEQ+FM MAA IK RM + A V+I+ PV Q G C Sbjct: 95 DQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC 204
BLAST of FC931414 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.419e-34 Identity = 72/110 (65.45%), Postives = 80/110 (72.73%), Query Frame = 2 Query: 2 DQESFNNVKQWLNEIDRYASDNVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKDSTTVEQAFMAMAASIKDRMASQPSMNNARPPTVQIKGQPVAQKSGCC 331 DQESFNNVKQWL EIDRYAS+NVNKLLVGNKCDLT KVV Y TAK FAD +GIPF+ETSAK++T VEQAFM MAA IK RM + + V I+ PV G C Sbjct: 92 DQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSEKSNVNIQSTPVKSSGGGC 201 The following BLAST results are available for this feature:
BLAST of FC931414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 161
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931414 ID=FC931414; Name=FC931414; organism=Citrus clementina; type=EST; length=699bpback to top |