FC931416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931416 vs. ExPASy Swiss-Prot
Match: TAD2A_ARATH (Transcriptional adapter ADA2a OS=Arabidopsis thaliana GN=ADA2A PE=1 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 2.845e-76 Identity = 149/252 (59.13%), Postives = 190/252 (75.40%), Query Frame = 1 Query: 4 AEPQSDRSIGEKKLRTSGDERPSMKELSGYNFKRQEFEIEYDNDAEHLLADMEFNKNDTDAERELKLRVLRIYGKRLDERKRRKDFILERNLLFPDPFERNLSPEEREIYQQYKVFMRFHSKEDHEELLKSVIEEHRIVKRIQELQEAQAAGCRTSSEAHRFLEQKRKKEAEENG-QRVKESGQAGPSGKVLQRPNSLKEVEVSPRGVVRGSTSLQPFGNDSYSTIA-----SSLEDWDISGFVGADLLSET 741 A+ QSDRS+GEKKLR G++ P + EL GYN KR+EFEIE+DNDAE LLADMEF +DTDAERE KL+VLRIY KRLDERKRRK+F+LERNLL+PD +E +LS EER+IY+ KVF RF SKE+H+EL+K VIEEH+I++RI++LQEA+ AGCRT+S+A+RF+E+KRKKEAEE+ R+ +GK L+ SPRG+ R +L PFG+DS + S L+ WD+ G +GADLLSET Sbjct: 246 AKQQSDRSVGEKKLRLPGEKVPLVTELYGYNLKREEFEIEHDNDAEQLLADMEFKDSDTDAEREQKLQVLRIYSKRLDERKRRKEFVLERNLLYPDQYEMSLSAEERKIYKSCKVFARFQSKEEHKELIKKVIEEHQILRRIEDLQEARTAGCRTTSDANRFIEEKRKKEAEESMLLRLNHGAPGSIAGKTLK----------SPRGLPR---NLHPFGSDSLPKVTPPRIYSGLDTWDVDGLLGADLLSET 484
BLAST of FC931416 vs. ExPASy Swiss-Prot
Match: TADA2_ORYSJ (Transcriptional adapter ADA2 OS=Oryza sativa subsp. japonica GN=ADA2 PE=2 SV=2) HSP 1 Score: 266.159 bits (679), Expect = 1.367e-70 Identity = 141/244 (57.79%), Postives = 177/244 (72.54%), Query Frame = 1 Query: 19 DRSIGEKKLRTSGDERPSMKELSGYNFKRQEFEIEYDNDAEHLLADMEFNKNDTDAERELKLRVLRIYGKRLDERKRRKDFILERNLLFPDPFERNLSPEEREIYQQYKVFMRFHSKEDHEELLKSVIEEHRIVKRIQELQEAQAAGCRTSSEAHRFLEQKRKKEAEENGQRVKESGQAGPSGKVLQRPNSLKEVEVSPR-GVVRGSTSLQPFGNDSYSTIASS----LEDWDISGFVGADLLS 735 DRSIG KK R S DE PS+ ELSGYN KR EF+ EYDNDAE LA+MEF + D++ +RELKLRVLRIY RLDERKRRK+FILERNLLFP+P E++L+ E++E+Y +YKVFMRF SKE+HE L++SV+EE +I +RIQELQE ++AGCRT +EA +EQKRKKE E N Q+ KESGQ + KV+ + N ++E +G SL G DS T + +DWDI GF GA+LLS Sbjct: 254 DRSIGVKKPRYSADEGPSLTELSGYNSKRHEFDPEYDNDAEQALAEMEFKETDSETDRELKLRVLRIYLSRLDERKRRKEFILERNLLFPNPLEKDLTNEDKEVYHRYKVFMRFLSKEEHEALVRSVLEERKIRRRIQELQECRSAGCRTLAEAKIHIEQKRKKEHEVNAQKAKESGQLLSNTKVVHKTNRPMKIESDGNLDQKKGGASLDSTGRDSPKTTGHAGTKHWDDWDIVGFPGAELLS 497
BLAST of FC931416 vs. ExPASy Swiss-Prot
Match: TAD2B_ARATH (Transcriptional adapter ADA2b OS=Arabidopsis thaliana GN=ADA2B PE=1 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 7.039e-59 Identity = 127/242 (52.48%), Postives = 167/242 (69.01%), Query Frame = 1 Query: 19 DRSIGEKKLRTSGDERPSMKELSGYNFKRQEFEIEYDNDAEHLLADMEFNKNDTDAERELKLRVLRIYGKRLDERKRRKDFILERNLLFPDPFERNLSPEEREIYQQYKVFMRFHSKEDHEELLKSVIEEHRIVKRIQELQEAQAAGCRTSSEAHRFLEQKRKKEAEENGQRVKESGQAGP-SGKVLQRPNSLKEVEVSPRGVVRGSTSLQPFGNDSYSTIASSLEDWDISGFVGADLLSET 741 DRS G KK S S+ ELS YN KR+EF+ EYDNDAE LLA+MEF +NDT E ELKLRVLRIY KRLDERKRRK+FI+ERNLL+P+PFE++LS EE+ ++ VFMRFHSKE+H+ELL++V+ E+R+VKR+++L+EAQ AGCR+++EA R+L +KRK+E EE R KESGQ G +G++ RP V+ S +S + D D+ GF + LLSE+ Sbjct: 210 DRSFGGKK-PVSTSVNNSLVELSNYNQKREEFDPEYDNDAEQLLAEMEFKENDTPEEHELKLRVLRIYSKRLDERKRRKEFIIERNLLYPNPFEKDLSQEEKVQCRRLDVFMRFHSKEEHDELLRNVVSEYRMVKRLKDLKEAQVAGCRSTAEAERYLGRKRKRENEEGMNRGKESGQFGQIAGEMGSRP----PVQAS----------------------SSYVNDLDLIGFTESQLLSES 424
BLAST of FC931416 vs. ExPASy Swiss-Prot
Match: ADA2_YEAST (Transcriptional adapter 2 OS=Saccharomyces cerevisiae GN=ADA2 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.939e-16 Identity = 50/151 (33.11%), Postives = 79/151 (52.32%), Query Frame = 1 Query: 67 PSMKELSGYNFKRQEFEIEYDNDAEHLLADMEFNKNDTDAERELKLRVLRIYGKRLDERKRRKDFILERNLL---FPDPFERNLSPEEREIYQQYKVFMRFHSKEDHEELLKSVIEEHRIVKRIQELQEAQAAGCRTSSEAHRFLEQKRKK 510 PS E+ G+ R EFE E++N+AE + DM F +D + ELK +L IY RL R +K + E +L+ ++ S E +E+Y + K F R + +D EE K ++EE RIQ+LQE ++ G T ++ K+ + Sbjct: 157 PSCHEVQGFMPGRLEFETEFENEAEGPVKDMVFEPDDQPLDIELKFAILDIYNSRLTTRAEKKRLLFENHLMDYRKLQAIDKKRSKEAKELYNRIKPFARVMTAQDFEEFSKDILEELHCRARIQQLQEWRSNGLTTLEAGLKYERDKQAR 307
BLAST of FC931416 vs. ExPASy Swiss-Prot
Match: ADA2_SCHPO (Transcriptional adapter 2 OS=Schizosaccharomyces pombe GN=ada2 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.777e-15 Identity = 52/154 (33.77%), Postives = 80/154 (51.95%), Query Frame = 1 Query: 67 PSMKELSGYNFKRQEFEIEYDNDAEHLLADMEFNKNDTDA---ERELKLRVLRIYGKRLDERKRRKDFILERNLLFPDPFERN---LSPEEREIYQQYKVFMRFHSKEDHEELLKSVIEEHRIVKRIQELQEAQAAGCRTSSEAHRFLEQKRKK 510 P E+ GY R EF+ EY N+AE + DM F+ + ++ E +LKL +L IY RL R RK I NLL + N +S EER + + K F R + D+++ + S E+ + K+I +LQE + G T + H++ K +K Sbjct: 158 PQCHEIQGYMPGRLEFDQEYMNEAELPIKDMNFDDDLHESAKHEMQLKLTMLNIYNSRLTRRAVRKQTIFNHNLLDYRRLQANEKRMSKEERNLLNKTKAFARLLTGPDYQKFVNSYHEQITLKKQISDLQEWRQMGLTTLEQGHKYERDKTQK 311
BLAST of FC931416 vs. ExPASy Swiss-Prot
Match: TAD2B_XENLA (Transcriptional adapter 2-beta OS=Xenopus laevis GN=tada2b PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.239e-15 Identity = 47/171 (27.49%), Postives = 89/171 (52.05%), Query Frame = 1 Query: 88 GYNFKRQEFEIEYDNDAEHLLADMEFNKNDTDAERELKLRVLRIYGKRLDERKRRKDFILERNLL----------FPDPFERNLSPEEREIYQQYKVFMRFHSKEDHEELLKSVIEEHRIVKRIQELQEAQAAGCRTSSEAHRFLEQKRKKEAEENGQRVKESGQAGPSGK 570 GY R ++EIE+D +AE L++ + N +D D E ELK + +Y ++L ER+RRK + NL+ P +R +S EE+E+ + + +F S ++ E+ +++ +E + +I+ELQ + G + E+ + + K+E + + + S + GK Sbjct: 165 GYMPLRDDYEIEFDQEAETLISGLSVNYDDDDVEVELKEAYVDMYVRKLKERQRRKSLARDYNLVPAFLGKDKKEKEKPAKRKISKEEKELRLKLRPLYQFMSNKEIEDCFENMHKERMLRAKIRELQRYRRNGITKTEESAEYEAARHKREKRKENKNIANSKRGREDGK 335
BLAST of FC931416 vs. ExPASy Swiss-Prot
Match: TAD2A_HUMAN (Transcriptional adapter 2-alpha OS=Homo sapiens GN=TADA2L PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.815e-14 Identity = 48/151 (31.79%), Postives = 81/151 (53.64%), Query Frame = 1 Query: 76 KELSGYNFKRQEFEIEYDNDAEHLLADMEFNKNDTDAERELKLRVLRIYGKRLDERKRRKDFILERNLLFPDPF---ERNLSPEEREIYQQYKVFMRFHSKEDHEELLKSVIEEHRIVKRIQELQEAQAAGCRTSSEAHRFLEQKRKKEAE 519 ++++GY R +F E+DN AE L D++F ++D+D LK+ V+ IY RL ER+RRK I + L+ F ER E +++Y+ + F R +H++ ++S E + + I+ LQE + AG A + K+ +E E Sbjct: 163 RDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEE 313
BLAST of FC931416 vs. ExPASy Swiss-Prot
Match: TAD2A_BOVIN (Transcriptional adapter 2-alpha OS=Bos taurus GN=TADA2L PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.815e-14 Identity = 48/151 (31.79%), Postives = 81/151 (53.64%), Query Frame = 1 Query: 76 KELSGYNFKRQEFEIEYDNDAEHLLADMEFNKNDTDAERELKLRVLRIYGKRLDERKRRKDFILERNLLFPDPF---ERNLSPEEREIYQQYKVFMRFHSKEDHEELLKSVIEEHRIVKRIQELQEAQAAGCRTSSEAHRFLEQKRKKEAE 519 ++++GY R +F E+DN AE L D++F ++D+D LK+ V+ IY RL ER+RRK I + L+ F ER E +++Y+ + F R +H++ ++S E + + I+ LQE + AG A + K+ +E E Sbjct: 163 RDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLINLRKFQLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEE 313
BLAST of FC931416 vs. ExPASy Swiss-Prot
Match: TAD2A_RAT (Transcriptional adapter 2-alpha OS=Rattus norvegicus GN=Tada2l PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.371e-14 Identity = 48/151 (31.79%), Postives = 81/151 (53.64%), Query Frame = 1 Query: 76 KELSGYNFKRQEFEIEYDNDAEHLLADMEFNKNDTDAERELKLRVLRIYGKRLDERKRRKDFILERNLLFPDPF---ERNLSPEEREIYQQYKVFMRFHSKEDHEELLKSVIEEHRIVKRIQELQEAQAAGCRTSSEAHRFLEQKRKKEAE 519 ++++GY R +F E+DN AE L D++F ++D+D LK+ V+ IY RL ER+RRK I + L+ F ER E +++Y+ + F R +H++ ++S E + + I+ LQE + AG A + K+ +E E Sbjct: 163 RDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLVNLRKFRLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEE 313
BLAST of FC931416 vs. ExPASy Swiss-Prot
Match: TAD2A_MOUSE (Transcriptional adapter 2-alpha OS=Mus musculus GN=Tada2l PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.371e-14 Identity = 48/151 (31.79%), Postives = 81/151 (53.64%), Query Frame = 1 Query: 76 KELSGYNFKRQEFEIEYDNDAEHLLADMEFNKNDTDAERELKLRVLRIYGKRLDERKRRKDFILERNLLFPDPF---ERNLSPEEREIYQQYKVFMRFHSKEDHEELLKSVIEEHRIVKRIQELQEAQAAGCRTSSEAHRFLEQKRKKEAE 519 ++++GY R +F E+DN AE L D++F ++D+D LK+ V+ IY RL ER+RRK I + L+ F ER E +++Y+ + F R +H++ ++S E + + I+ LQE + AG A + K+ +E E Sbjct: 163 RDMAGYMPARADFIEEFDNYAEWDLRDIDFVEDDSDILHALKMAVVDIYHSRLKERQRRKKIIRDHGLVNLRKFRLMERRYPKEVQDLYETMRRFARIVGPVEHDKFIESHALEFELRREIKRLQEYRTAGITNFCSARTYDHLKKTREEE 313 The following BLAST results are available for this feature:
BLAST of FC931416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931416 ID=FC931416; Name=FC931416; organism=Citrus clementina; type=EST; length=741bpback to top |