FC931449

Overview
NameFC931449
Unique NameFC931449
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length697
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14892 contig Ccv1_Contig14892:1..677. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931449 vs. ExPASy Swiss-Prot
Match: YAI5_SCHPO (Uncharacterized protein C24B11.05 OS=Schizosaccharomyces pombe GN=SPAC24B11.05 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.276e-16
Identity = 69/200 (34.50%), Postives = 93/200 (46.50%), Query Frame = 1
Query:   91 LLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLRNLLLSMPQRKI--IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANV-DPKKTIFFDDSARNIASAKAAG 678
            + FDLD+ LYP S   +      I  F S  L I   E  R+    YR +G  + GL  + +E D  ++   V   LP EK +K D VLR +LL + ++    IFTNA   HA  VL  LG+EDCF+GI   +                     + + ++ KP  E  E  +R A V D  K IF DDS  NI  A+  G
Sbjct:    8 IFFDLDNCLYPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VLHHEIDAVDYDQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYLGIEDCFDGITYCD--------------------YNAKDLIAKPMPEMYERVMREAGVTDKDKCIFVDDSYGNILGAREFG 186          
BLAST of FC931449 vs. ExPASy Swiss-Prot
Match: SSM1_YEAST (Protein SSM1 OS=Saccharomyces cerevisiae GN=SSM1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.475e-15
Identity = 62/212 (29.25%), Postives = 103/212 (48.58%), Query Frame = 1
Query:   79 NYECLLFDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLRNLLLSMPQR-KI----IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDPKKTIFF-DDSARNIASAKAAGLHTVI 693
            N +   FD+D+ LY  ST  +   +++I  F   HL +   +   +    Y+E+G  + GL  + ++ +  E++  V   LP +  LKPD  LRN+LL + Q  KI    +FTNA + HA+  L  LG+ D F                   DG+    +S    ++CKP ++A E A++ + +   +  +F DDS +NI +    G+ T I
Sbjct:   54 NLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF-------------------DGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCI 245          
BLAST of FC931449 vs. ExPASy Swiss-Prot
Match: PHM8_YEAST (Phosphate metabolism protein 8 OS=Saccharomyces cerevisiae GN=PHM8 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.475e-15
Identity = 59/208 (28.37%), Postives = 98/208 (47.12%), Query Frame = 1
Query:   97 FDLDDTLYPLSTGFNLACRRNIEEFMSQHLHIDESEVPRMCLELYREHGTTMAGLKAVGYEFDNDEFHAFVHGKLPYEK-LKPDPVLRNLLLSMPQRKI-------IFTNADQKHAMEVLGRLGLEDCFEGIICFETINPRLQPADNTDGIENNSFSSNQRILCKPSLEAIETAIRIANVDP-KKTIFFDDSARNIASAKAAGLHTVI 693
            FD+D+TLY  ST   L  ++++  F    L  D+ E  R+    Y+E+G ++ GL       D  +++ F+   LP +  LKPD  LR LL+++ ++K+       +FTN+ + HA+  +  LG+ D F+GI       P                   +  +CKP  +  ETA   + +       F DD+  N+ SA + G+  VI
Sbjct:   57 FDIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIESYYQEYGLSVKGLIKNKQIDDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKFDKLWLFTNSYKNHAIRCVKILGIADLFDGITYCHYDRP-----------------IEEEFICKPDPKFFETAKLQSGLSSFANAWFIDDNESNVRSALSMGMGHVI 247          
The following BLAST results are available for this feature:
BLAST of FC931449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
YAI5_SCHPO2.276e-1634.50Uncharacterized protein C24B11.05 OS=Schizosacchar... [more]
SSM1_YEAST1.475e-1529.25Protein SSM1 OS=Saccharomyces cerevisiae GN=SSM1 P... [more]
PHM8_YEAST1.475e-1528.37Phosphate metabolism protein 8 OS=Saccharomyces ce... [more]
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Properties
Property NameValue
Genbank descriptionC34105C02EF PostHarvP1 Citrus clementina cDNA clone C34105C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931449 ID=FC931449; Name=FC931449; organism=Citrus clementina; type=EST; length=697bp
CACAACTCAAAGCACTTTCTGATGGGTTCATTAGGTCCGGCCTTGAAGAT
GGATACCATGGGAAGGACAACTGCAGCCAATTACGAGTGCCTGCTCTTCG
ATTTGGATGACACTTTATACCCATTGAGCACTGGTTTTAACTTGGCCTGC
CGTAGGAACATAGAAGAGTTCATGTCGCAACACTTGCACATAGATGAAAG
TGAAGTACCCAGGATGTGTTTGGAATTGTACCGGGAACACGGGACAACAA
TGGCCGGTCTAAAGGCTGTTGGTTATGAGTTTGACAATGATGAGTTTCAT
GCTTTTGTCCACGGAAAATTACCTTACGAAAAGCTGAAGCCTGATCCAGT
ATTAAGAAACCTTCTACTTTCCATGCCACAGCGAAAAATAATCTTCACCA
ATGCTGATCAGAAGCATGCAATGGAAGTTCTCGGCAGGTTGGGCTTGGAA
GATTGTTTTGAAGGCATCATATGCTTTGAAACTATTAACCCCCGTCTTCA
ACCGGCCGACAACACGGACGGAATTGAGAACAACAGTTTCAGCTCCAACC
AAAGGATCCTCTGTAAACCCTCACTGGAAGCTATTGAAACTGCTATTAGG
ATCGCAAATGTTGACCCAAAGAAAACAATTTTCTTTGACGACAGTGCTCG
AAACATTGCAAGTGCAAAGGCAGCAGGTCTTCATACCGTGATTGTGG
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