FC931465

Overview
NameFC931465
Unique NameFC931465
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15516 contig Ccv1_Contig15516:1188..1866. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC931465 vs. ExPASy Swiss-Prot
Match: SUS2_PEA (Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1)

HSP 1 Score: 410.223 bits (1053), Expect = 4.958e-114
Identity = 193/219 (88.13%), Postives = 210/219 (95.89%), Query Frame = 3
Query:    3 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFS 659
            TE+THILRVPFRSEKGILR+WISRFDVWP+LETF EDV SEI AELQ +PDFIIGNYSDGNLVASLLAYKMG+TQCTIAHALEKTKYPDSDIYWKKF++KYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNT+GQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPYS+K+KRLTALH SIE+LL+  EQ DE++G+L+DRSKPI+FS
Sbjct:  360 TEYTHILRVPFRSEKGILRKWISRFDVWPFLETFAEDVASEIAAELQCYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTIGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSDKEKRLTALHSSIEKLLYGTEQTDEYIGSLTDRSKPIIFS 578          
BLAST of FC931465 vs. ExPASy Swiss-Prot
Match: SUS2_ARATH (Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g49190 PE=2 SV=2)

HSP 1 Score: 385.956 bits (990), Expect = 1.001e-106
Identity = 181/219 (82.65%), Postives = 201/219 (91.78%), Query Frame = 3
Query:    3 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFS 659
            TEH HILR+PFR+EKGILR+WISRFDVWPYLETF ED  +EI+AELQG P+ IIGNYSDGNLVASLLA K+G+ QC IAHALEKTKYP+SDIYW+  ++KYHFS QFTADLIAMNNADFIITSTYQEIAG+KN VGQYESHTAFT+PGLYRVVHGIDVFDPKFNIVSPGADM IYFPYS+K++RLTALH SIE+LLF  EQNDEHVG LSD+SKPI+FS
Sbjct:  354 TEHAHILRIPFRTEKGILRKWISRFDVWPYLETFAEDASNEISAELQGVPNLIIGNYSDGNLVASLLASKLGVIQCNIAHALEKTKYPESDIYWRNHEDKYHFSSQFTADLIAMNNADFIITSTYQEIAGSKNNVGQYESHTAFTMPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSDKERRLTALHESIEELLFSAEQNDEHVGLLSDQSKPIIFS 572          
BLAST of FC931465 vs. ExPASy Swiss-Prot
Match: SUSY_BETVU (Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS1 PE=2 SV=1)

HSP 1 Score: 379.793 bits (974), Expect = 7.176e-105
Identity = 181/220 (82.27%), Postives = 197/220 (89.55%), Query Frame = 3
Query:    3 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKR-LTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFS 659
            TEH  ILRVPFRSEKGILR+WISRFDVWPYLETFTED   EI  ELQG PD IIGNYSDGN+VASLL++KMG+TQC IAHALEKTKYPDSDIYWK+F++KYHFSCQF+ADL+AMN+ADFIITSTYQEIAGTKNTVGQYESH AFT PGLYRVVHGIDVFDPKFNIVSPGADM IYFP+SEK    LT+LH  IEQLLF PEQN+EH+G L D SKPI+FS
Sbjct:  302 TEHASILRVPFRSEKGILRKWISRFDVWPYLETFTEDAAGEIIGELQGRPDLIIGNYSDGNIVASLLSHKMGVTQCNIAHALEKTKYPDSDIYWKRFEDKYHFSCQFSADLMAMNHADFIITSTYQEIAGTKNTVGQYESHKAFTFPGLYRVVHGIDVFDPKFNIVSPGADMAIYFPFSEKDVTCLTSLHRLIEQLLFKPEQNEEHIGVLDDTSKPIIFS 521          
BLAST of FC931465 vs. ExPASy Swiss-Prot
Match: SUS1_TULGE (Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 7.426e-102
Identity = 172/219 (78.54%), Postives = 198/219 (90.41%), Query Frame = 3
Query:    3 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFS 659
            TEHTHILRVPFR++KGILR+WISRF+VWPYLET+ EDV  E+  E+Q  PD IIGNYSDGNLVASLLA+++GITQCTIAHALEKTKYP+SDIY KKFD++YHFSCQFTADLIAMN +DFIITST+QEIAG+K+TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADM IY+PY E++KRLTALH  IE+LL+   +N+EH   L DR+KPI+FS
Sbjct:  356 TEHTHILRVPFRTDKGILRKWISRFEVWPYLETYAEDVAHELAGEMQATPDLIIGNYSDGNLVASLLAHRLGITQCTIAHALEKTKYPNSDIYLKKFDDQYHFSCQFTADLIAMNQSDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYYPYFEQEKRLTALHAEIEELLYSSVENEEHKFVLKDRNKPIIFS 574          
BLAST of FC931465 vs. ExPASy Swiss-Prot
Match: SUS2_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 1.267e-101
Identity = 172/219 (78.54%), Postives = 197/219 (89.95%), Query Frame = 3
Query:    3 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFS 659
            TEH+HILRVPFR+EKGI+R+WISRF+VWPY+ETF EDVG EITAELQ  PD IIGNYS+GNL ASLLA+K+G+TQCTIAHALEKTKYPDSDIY  KFDEKYHFS QFTADLIAMN+ DFIITST+QEIAG+K+TVGQYESH AFT+PGLYRVVHGIDVFDPKFNIVSPGAD+++YFPYSEK+KRLT  H  IE LLF   +N+EH+  L DR+KPI+F+
Sbjct:  357 TEHSHILRVPFRTEKGIVRKWISRFEVWPYMETFIEDVGKEITAELQAKPDLIIGNYSEGNLAASLLAHKLGVTQCTIAHALEKTKYPDSDIYLNKFDEKYHFSAQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADVNLYFPYSEKEKRLTTFHPEIEDLLFSDVENEEHLCVLKDRNKPIIFT 575          
BLAST of FC931465 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 2.161e-101
Identity = 168/219 (76.71%), Postives = 196/219 (89.50%), Query Frame = 3
Query:    3 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFS 659
            TEH HILRVPFR +KGI+R+WISRF+VWPYLET+TEDV  E+  ELQG PD I+GNYSDGN+VASLLA+K+G+TQCTIAHALEKTKYP+SDIYWKKF+EKYHFSCQFTADL AMN+ DFIITST+QEIAG+K+TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGAD  IYFPY+E  +RLT+ +  IE+LL+   +N+EH+  L DRSKPI+F+
Sbjct:  357 TEHCHILRVPFRDQKGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKFEEKYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPYTETSRRLTSFYPEIEELLYSTVENEEHICVLKDRSKPIIFT 575          
BLAST of FC931465 vs. ExPASy Swiss-Prot
Match: SUSY_SOYBN (Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2)

HSP 1 Score: 367.466 bits (942), Expect = 3.685e-101
Identity = 167/219 (76.26%), Postives = 197/219 (89.95%), Query Frame = 3
Query:    3 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFS 659
            TEH+HILRVPFR+EKGI+R+WISRF+VWPYLET+TEDV  E+  ELQG PD I+GNYSDGN+VASLLA+K+G+TQCTIAHALEKTKYP+SDIYWKK +E+YHFSCQFTADL AMN+ DFIITST+QEIAG+K+TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGAD  IYFP++E  +RLT+ H  IE+LL+   +N+EH+  L DRSKPI+F+
Sbjct:  357 TEHSHILRVPFRTEKGIVRKWISRFEVWPYLETYTEDVAHELAKELQGKPDLIVGNYSDGNIVASLLAHKLGVTQCTIAHALEKTKYPESDIYWKKLEERYHFSCQFTADLFAMNHTDFIITSTFQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADQTIYFPHTETSRRLTSFHPEIEELLYSSVENEEHICVLKDRSKPIIFT 575          
BLAST of FC931465 vs. ExPASy Swiss-Prot
Match: SUS2_TULGE (Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 6.287e-101
Identity = 169/219 (77.17%), Postives = 198/219 (90.41%), Query Frame = 3
Query:    3 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFS 659
            TEHTHILRVPFR+E GILR+WISRF+VWPYLET+ EDV +E+  ELQ  PD IIGNYSDGNLVASL+A+K+G+TQCTIAHALEKTKYP+SD+YWKKF+++YHFSCQFTADLIAMN+ADFIITST+QEIAG+K+TVGQYESHT FTLPGLYRVVHGIDVFDPKFNIVSPGADM IYFPY+E +KRLTALH  IE+LL+   ++ E+   L D++KPI+FS
Sbjct:  358 TEHTHILRVPFRTEHGILRKWISRFEVWPYLETYAEDVANEVAGELQATPDLIIGNYSDGNLVASLMAHKLGVTQCTIAHALEKTKYPNSDLYWKKFEKQYHFSCQFTADLIAMNHADFIITSTFQEIAGSKDTVGQYESHTGFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEAEKRLTALHPEIEELLYSSAESTEYKFGLKDKTKPIIFS 576          
BLAST of FC931465 vs. ExPASy Swiss-Prot
Match: SUS1_ORYSJ (Sucrose synthase 1 OS=Oryza sativa subsp. japonica GN=SUS1 PE=1 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 6.287e-101
Identity = 171/219 (78.08%), Postives = 193/219 (88.13%), Query Frame = 3
Query:    3 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFS 659
            TEHTHILRVPFR+E GI+R+WISRF+VWPYLETFT+DV  EI  ELQ  PD IIGNYSDGNLVA LLA+KMG+T CTIAHALEKTKYP+SD+YWKKF++ YHFSCQFT DLIAMN+ADFIITST+QEIAG K+TVGQYESH AFT+PGLYRVVHGIDVFDPKFNIVSPGADM IYFPYSE +KRLT+LH  IE+LL+    N+EH   L DR+KPI+FS
Sbjct:  362 TEHTHILRVPFRTENGIVRKWISRFEVWPYLETFTDDVAHEIAGELQANPDLIIGNYSDGNLVACLLAHKMGVTHCTIAHALEKTKYPNSDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQEIAGNKDTVGQYESHMAFTMPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYSESRKRLTSLHPEIEELLYSEVDNNEHKFMLKDRNKPIIFS 580          
BLAST of FC931465 vs. ExPASy Swiss-Prot
Match: SUSY_SOLLC (Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.072e-100
Identity = 169/219 (77.17%), Postives = 198/219 (90.41%), Query Frame = 3
Query:    3 TEHTHILRVPFRSEKGILRQWISRFDVWPYLETFTEDVGSEITAELQGFPDFIIGNYSDGNLVASLLAYKMGITQCTIAHALEKTKYPDSDIYWKKFDEKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMDIYFPYSEKQKRLTALHGSIEQLLFDPEQNDEHVGTLSDRSKPIVFS 659
            TEH+HILRVPF +EKGI+R+WISRF+VWPY+ETF EDV  EI+AELQ  PD IIGNYS+GNL ASLLA+K+G+TQCTIAHALEKTKYPDSDIYWKKFDEKYHFS QFTADLIAMN+ DFIITST+QEIAG+K+TVGQYESH AFT+PGLYRVVHGI+VFDPKFNIVSPGAD+++YFPYSE +KRLTA H  I++LL+   +NDEH+  L DR+KPI+F+
Sbjct:  357 TEHSHILRVPFGTEKGIVRKWISRFEVWPYMETFIEDVAKEISAELQAKPDLIIGNYSEGNLAASLLAHKLGVTQCTIAHALEKTKYPDSDIYWKKFDEKYHFSSQFTADLIAMNHTDFIITSTFQEIAGSKDTVGQYESHMAFTMPGLYRVVHGINVFDPKFNIVSPGADINLYFPYSESEKRLTAFHPEIDELLYSDVENDEHLCVLKDRTKPILFT 575          
The following BLAST results are available for this feature:
BLAST of FC931465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SUS2_PEA4.958e-11488.13Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 S... [more]
SUS2_ARATH1.001e-10682.65Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g... [more]
SUSY_BETVU7.176e-10582.27Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS... [more]
SUS1_TULGE7.426e-10278.54Sucrose synthase 1 OS=Tulipa gesneriana PE=2 SV=1[more]
SUS2_SOLTU1.267e-10178.54Sucrose synthase OS=Solanum tuberosum PE=3 SV=1[more]
SUSY_VICFA2.161e-10176.71Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]
SUSY_SOYBN3.685e-10176.26Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2[more]
SUS2_TULGE6.287e-10177.17Sucrose synthase 2 OS=Tulipa gesneriana PE=2 SV=1[more]
SUS1_ORYSJ6.287e-10178.08Sucrose synthase 1 OS=Oryza sativa subsp. japonica... [more]
SUSY_SOLLC1.072e-10077.17Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC34105D08EF PostHarvP1 Citrus clementina cDNA clone C34105D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931465 ID=FC931465; Name=FC931465; organism=Citrus clementina; type=EST; length=679bp
GAACAGAACACACCCATATTCTGCGTGTTCCTTTTAGATCAGAGAAAGGC
ATTCTTCGTCAGTGGATCTCGAGATTCGATGTCTGGCCTTACTTGGAGAC
CTTTACTGAGGATGTAGGAAGCGAAATCACTGCTGAATTGCAGGGTTTCC
CTGATTTTATTATTGGCAACTATAGTGATGGAAACCTTGTTGCATCTTTG
TTAGCATATAAAATGGGAATTACCCAGTGCACCATTGCACATGCATTGGA
GAAAACAAAGTACCCAGATTCAGATATATATTGGAAGAAGTTTGATGAAA
AATATCATTTTTCATGCCAATTCACTGCTGACCTGATAGCCATGAACAAT
GCAGATTTTATCATCACCAGTACATACCAAGAGATTGCCGGAACGAAAAA
TACTGTTGGTCAGTATGAGAGCCACACTGCATTCACTCTTCCAGGCTTAT
ATCGAGTTGTTCATGGCATTGATGTTTTTGATCCGAAGTTCAATATTGTG
TCCCCGGGGGCAGACATGGACATTTATTTCCCATACTCTGAAAAGCAGAA
AAGACTCACAGCCCTACATGGTTCTATAGAACAGTTGCTGTTTGATCCTG
AACAGAATGATGAGCATGTTGGTACATTGAGTGATCGGTCGAAGCCCATT
GTCTTTTCATGGCGAGGCTTGACATGTGA
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