FC931466

Overview
NameFC931466
Unique NameFC931466
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length778
Libraries
Library NameType
PostHarvP1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC931466 vs. ExPASy Swiss-Prot
Match: DUS1_RAT (Dual specificity protein phosphatase 1 OS=Rattus norvegicus GN=Dusp1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.878e-17
Identity = 45/127 (35.43%), Postives = 74/127 (58.27%), Query Frame = 3
Query:  345 IADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQDVKGSRGVTIPTWGLL 725
            I   +YLGS   A  + +L   GIT ++N V   CP +F+G   YK++ ++D+   DI+S   +  D+ + +++ GGRVFVHC  G+SRS ++ +AYLM       ++AF+ VK  R +  P +  +
Sbjct:  177 ILSFLYLGSAYHASRKDMLDALGITALIN-VSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKDAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFM 302          
BLAST of FC931466 vs. ExPASy Swiss-Prot
Match: DUS1_MOUSE (Dual specificity protein phosphatase 1 OS=Mus musculus GN=Dusp1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.878e-17
Identity = 45/127 (35.43%), Postives = 74/127 (58.27%), Query Frame = 3
Query:  345 IADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQDVKGSRGVTIPTWGLL 725
            I   +YLGS   A  + +L   GIT ++N V   CP +F+G   YK++ ++D+   DI+S   +  D+ + +++ GGRVFVHC  G+SRS ++ +AYLM       ++AF+ VK  R +  P +  +
Sbjct:  177 ILSFLYLGSAYHASRKDMLDALGITALIN-VSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKDAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFM 302          
BLAST of FC931466 vs. ExPASy Swiss-Prot
Match: DUS1_HUMAN (Dual specificity protein phosphatase 1 OS=Homo sapiens GN=DUSP1 PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 4.184e-17
Identity = 45/127 (35.43%), Postives = 73/127 (57.48%), Query Frame = 3
Query:  345 IADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQDVKGSRGVTIPTWGLL 725
            I   +YLGS   A  + +L   GIT ++N V   CP +F+G   YK++ ++D+   DI+S   +  D+ + ++  GGRVFVHC  G+SRS ++ +AYLM       ++AF+ VK  R +  P +  +
Sbjct:  177 ILPFLYLGSAYHASRKDMLDALGITALIN-VSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFM 302          
BLAST of FC931466 vs. ExPASy Swiss-Prot
Match: DUS4_CHICK (Dual specificity protein phosphatase 4 OS=Gallus gallus GN=DUSP4 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.136e-17
Identity = 48/127 (37.80%), Postives = 72/127 (56.69%), Query Frame = 3
Query:  345 IADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQDVKGSRGVTIPTWGLL 725
            I   +YLGS   A  R +L   GIT +LN V   CP +F+G   YK + ++D+   DI+S   +  +Y + V+E  GRV VHC  G+SRS ++ +AYLM ++    E AF+ VK  R +  P +  +
Sbjct:  180 ILPFLYLGSAYHAARRDMLDALGITALLN-VSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDSVKECCGRVLVHCQAGISRSATICLAYLMMKKRVKLEKAFEFVKQRRSIISPNFSFM 305          
BLAST of FC931466 vs. ExPASy Swiss-Prot
Match: DUS4_RAT (Dual specificity protein phosphatase 4 OS=Rattus norvegicus GN=Dusp4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.217e-16
Identity = 47/127 (37.01%), Postives = 73/127 (57.48%), Query Frame = 3
Query:  345 IADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQDVKGSRGVTIPTWGLL 725
            I   +YLGS   A  R +L   GIT +LN V   CP +F+G   YK + ++D+   DI+S   +  +Y + V++  GRV VHC  G+SRS ++ +AYLM ++    E+AF+ VK  R +  P +  +
Sbjct:  200 ILPFLYLGSAYHAARRDMLDALGITALLN-VSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHCQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFM 325          
BLAST of FC931466 vs. ExPASy Swiss-Prot
Match: DUS4_MOUSE (Dual specificity protein phosphatase 4 OS=Mus musculus GN=Dusp4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.217e-16
Identity = 47/127 (37.01%), Postives = 73/127 (57.48%), Query Frame = 3
Query:  345 IADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQDVKGSRGVTIPTWGLL 725
            I   +YLGS   A  R +L   GIT +LN V   CP +F+G   YK + ++D+   DI+S   +  +Y + V++  GRV VHC  G+SRS ++ +AYLM ++    E+AF+ VK  R +  P +  +
Sbjct:  203 ILPFLYLGSAYHAARRDMLDALGITALLN-VSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHCQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFM 328          
BLAST of FC931466 vs. ExPASy Swiss-Prot
Match: DUS4_HUMAN (Dual specificity protein phosphatase 4 OS=Homo sapiens GN=DUSP4 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.217e-16
Identity = 47/127 (37.01%), Postives = 73/127 (57.48%), Query Frame = 3
Query:  345 IADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQDVKGSRGVTIPTWGLL 725
            I   +YLGS   A  R +L   GIT +LN V   CP +F+G   YK + ++D+   DI+S   +  +Y + V++  GRV VHC  G+SRS ++ +AYLM ++    E+AF+ VK  R +  P +  +
Sbjct:  199 ILPFLYLGSAYHAARRDMLDALGITALLN-VSSDCPNHFEGHYQYKCIPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHCQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNFSFM 324          
BLAST of FC931466 vs. ExPASy Swiss-Prot
Match: DUS19_HUMAN (Dual specificity protein phosphatase 19 OS=Homo sapiens GN=DUSP19 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.114e-15
Identity = 46/133 (34.59%), Postives = 70/133 (52.63%), Query Frame = 3
Query:  327 DKECSRIADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQDVKGSRGVTIPTWGLL 725
            D +   I   + LGS   A +   L++N +TH+LN V +     F  D  YK++ + D P  +I S   + F++ E+ + + G V VHC  GVSR+ ++VI +LM  E  SF  AF  VK +R    P  G +
Sbjct:   63 DLQVGVIKPWLLLGSQDAAHDLDTLKKNKVTHILN-VAYGVENAFLSDFTYKSISILDLPETNILSYFPECFEFIEEAKRKDGVVLVHCNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSICPNSGFM 194          
BLAST of FC931466 vs. ExPASy Swiss-Prot
Match: DUS2_MOUSE (Dual specificity protein phosphatase 2 OS=Mus musculus GN=Dusp2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.724e-15
Identity = 44/127 (34.65%), Postives = 72/127 (56.69%), Query Frame = 3
Query:  345 IADHIYLGSDAVAKNRGILRQNGITHVLNCVGFVCPEYFKGDLVYKTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQDVKGSRGVTIPTWGLL 725
            I  ++YLGS   + +   L+  GIT VLN V   CP +F+G   YK++ ++D+   +I++   +   + + V+  GGRV VHC  G+SRS ++ +AYL+       ++AF  VK  RGV  P +  +
Sbjct:  180 ILPYLYLGSCNHSSDLQGLQACGITAVLN-VSASCPNHFEGLFHYKSIPVEDNQMVEISAWFQEAISFIDSVKNSGGRVLVHCQAGISRSATICLAYLIQSHRVRLDEAFDFVKQRRGVISPNFSFM 305          
BLAST of FC931466 vs. ExPASy Swiss-Prot
Match: DUSPR_DICDI (Probable rhodanese domain-containing dual specificity protein phosphatase OS=Dictyostelium discoideum GN=DDB_G0273199 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.488e-14
Identity = 48/130 (36.92%), Postives = 66/130 (50.77%), Query Frame = 3
Query:  345 IADHIYLGSDAVAKNRGILRQNGITHVLNCVGF---VCPEYFKGDLVYKTLWLQDSPSEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQDVKGSRGVTIPTWGLL 725
            I D +YLG    A NR  L    ITH++N  G    V P  +K    Y    L D P  +I      V  +  D ++QGGRV +HC  G+SRST++V+AYLM  +  ++ DAF   K  R    P +G +
Sbjct:  213 IKDFLYLGGAENAGNRQQLINLKITHLVNMAGELDDVYPHLYK----YYRANLDDRPKANIYEHFEPVIQFINDCKKQGGRVLIHCAMGISRSTTVVLAYLMKEDHMTYSDAFTFCKQKRSCINPNFGFV 338          
The following BLAST results are available for this feature:
BLAST of FC931466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
DUS1_RAT1.878e-1735.43Dual specificity protein phosphatase 1 OS=Rattus n... [more]
DUS1_MOUSE1.878e-1735.43Dual specificity protein phosphatase 1 OS=Mus musc... [more]
DUS1_HUMAN4.184e-1735.43Dual specificity protein phosphatase 1 OS=Homo sap... [more]
DUS4_CHICK7.136e-1737.80Dual specificity protein phosphatase 4 OS=Gallus g... [more]
DUS4_RAT1.217e-1637.01Dual specificity protein phosphatase 4 OS=Rattus n... [more]
DUS4_MOUSE1.217e-1637.01Dual specificity protein phosphatase 4 OS=Mus musc... [more]
DUS4_HUMAN1.217e-1637.01Dual specificity protein phosphatase 4 OS=Homo sap... [more]
DUS19_HUMAN5.114e-1534.59Dual specificity protein phosphatase 19 OS=Homo sa... [more]
DUS2_MOUSE8.724e-1534.65Dual specificity protein phosphatase 2 OS=Mus musc... [more]
DUSPR_DICDI1.488e-1436.92Probable rhodanese domain-containing dual specific... [more]

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Properties
Property NameValue
Genbank descriptionC34105D09EF PostHarvP1 Citrus clementina cDNA clone C34105D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC931466 ID=FC931466; Name=FC931466; organism=Citrus clementina; type=EST; length=778bp
GAGACCGGCTATCCGGTGGCAGTGGCAACAGAAGAGCTTATTTGCGGTCG
GTCTCTTGGACTGACCGGTCACCCAATAAGCCTAATCCAATTCCCAGACC
CCAACCTAATAGTAAAGCTCGGTCTTTATTGCCGCCTCTTCAGCCGCTTT
CAATCAACAGGCGGCCTGTTGAGCAATGGCCAAGGGCTGGTTCTGATGAT
CTTGGTGTGTGGCCTAACCCTCAAACTCCCAGAGGGTCGGTTCAACTGAA
CCCCCTTGAGAGTTCTAGTTCGGAGCTGCAGCCTGTGAAGGAATTTGAGT
TTAAGAAAGATAAGCTTGCATTTTTCGATAAGGAGTGCTCCAGGATCGCT
GATCATATATATTTAGGGAGTGATGCCGTGGCCAAGAATCGTGGGATTTT
GAGGCAAAATGGGATTACTCATGTGCTTAATTGTGTTGGGTTTGTTTGTC
CCGAGTATTTCAAGGGCGATCTTGTTTATAAGACGCTTTGGTTGCAAGAT
AGTCCTTCGGAGGATATTACGAGCATTCTCTATGATGTGTTTGATTACTT
TGAAGACGTTCGAGAACAAGGCGGGCGAGTTTTTGTACACTGTTGCCAGG
GAGTGTCGCGGTCTACCTCTCTGGTTATTGCATACCTCATGTGGAGGGAG
GGCCAGAGTTTTGAGGACGCATTTCAGGACGTCAAAGGCAGCAGAGGAGT
AACTATCCCGACATGGGGTTTGCTTGCCAGCTTTTGCTGTGCCAGAACGA
GTGCATGCTATGCCTGCCGGCCCAATTC
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