FC931467
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931467 vs. ExPASy Swiss-Prot
Match: SEC13_RAT (Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.534e-52 Identity = 99/182 (54.40%), Postives = 124/182 (68.13%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGGCD 633 ++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGGCD Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT-WEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCD 188
BLAST of FC931467 vs. ExPASy Swiss-Prot
Match: SEC13_MOUSE (Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=2 SV=3) HSP 1 Score: 206.068 bits (523), Expect = 1.534e-52 Identity = 99/182 (54.40%), Postives = 124/182 (68.13%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGGCD 633 ++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGGCD Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT-WEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCD 188
BLAST of FC931467 vs. ExPASy Swiss-Prot
Match: SEC13_HUMAN (Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3) HSP 1 Score: 203.756 bits (517), Expect = 7.614e-52 Identity = 97/182 (53.30%), Postives = 124/182 (68.13%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGGCD 633 ++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIW+E N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T +G W+ +I+ AH +G +VSWAP+ PG+L+ SG + +++ SGGCD Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT-WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCD 188
BLAST of FC931467 vs. ExPASy Swiss-Prot
Match: SEC13_BOVIN (Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.299e-51 Identity = 99/182 (54.40%), Postives = 123/182 (67.58%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVG--SGFL-DPVQKLCSGGCD 633 ++T HED +HD MDYYG RLAT SSD S+KI V N +A L GH+G VW+VAWAHP +G+ILASCS+D VIIWKE N W K H H SSVNS+ WAPH+ GL LACGSSDG IS+ T G W+ +I+ AH +G +VSWAP+ PG+L+ SG + ++K SGGCD Sbjct: 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT-WEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCD 188
BLAST of FC931467 vs. ExPASy Swiss-Prot
Match: SEC13_DICDI (Protein transport protein SEC13 OS=Dictyostelium discoideum GN=sec13 PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 5.457e-50 Identity = 94/187 (50.27%), Postives = 120/187 (64.17%), Query Frame = 1 Query: 82 MPPQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSG---FLDPVQKLCSGGCD 633 M Q +++GHED VHD DYYGK LAT SSD IKI VG QHL L GH+G VW+VAWAHPKFG ILAS S+D VI+WKE +N W H + H+ SVNSI WAPHE GL LAC SSDG++++ + W+ + Q +GV SVSW+P+ P +LV S P++++ +G CD Sbjct: 1 MATQNVDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIFDVGGENPQHLVDLRGHEGPVWQVAWAHPKFGKILASASYDRKVIVWKEVGNNSWSIIHQYAGHELSVNSISWAPHEFGLSLACASSDGSVTIHNYN-NNVWEAPQKIQVSQIGVNSVSWSPAAIPTSLVNSANTIIPAPIKRIVTGSCD 186
BLAST of FC931467 vs. ExPASy Swiss-Prot
Match: SEC13_USTMA (Protein transport protein SEC13 OS=Ustilago maydis GN=SEC13 PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.941e-47 Identity = 101/220 (45.91%), Postives = 127/220 (57.73%), Query Frame = 1 Query: 88 PQKIETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAK-LSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-----------------------GNSNEW--IKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV------------GSGFLDPVQKLCSGGCD 633 P+ IET HED VHD +D+YGKRLAT SSD ++K+ + N T A+ L GH+G VW+VAWAHP FG ILASCS+DG V+IWK+ ++ W IK+H H +SVNSI WAPHELG LAC SSDGN+SV T DG W + AHPVG +VSWAP+ PG+L+ +G V++ S GCD Sbjct: 18 PKNIETQHEDMVHDAQLDFYGKRLATCSSDRTVKVFDIVNGTPSTTAETLHGHQGPVWQVAWAHPTFGDILASCSYDGKVVIWKDNGAGASIGASAPYGSQSAYGAPTSSAGGWTKIKEHTL--HTASVNSISWAPHELGSILACASSDGNVSVLTFNNDGTWAVDLV-AAHPVGCNAVSWAPAVVPGSLISAQSVGANAGAASNGEAKLVKRFASAGCD 234
BLAST of FC931467 vs. ExPASy Swiss-Prot
Match: SEC13_COCIM (Protein transport protein SEC13 OS=Coccidioides immitis GN=SEC13 PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.391e-45 Identity = 91/183 (49.73%), Postives = 124/183 (67.76%), Query Frame = 1 Query: 103 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNS-----NEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALV-GSGFLDPVQKLCSGGCD 633 +GH+D +HD MDYYG+RLAT SSD +IKI + ++ + + L GH+GAVW VAWAHPKFG+ILAS S+DG V+IW+E +S + W + F H +SVN + WAPHELG LAC SSDG++SV R D W T +I AH +GV SVSWAP+ APG+++ + +++ +GG D Sbjct: 8 SGHDDMIHDAGMDYYGRRLATCSSDKTIKIFELEGDSHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQSSAASTGSSWSRVFDFSLHTASVNMVSWAPHELGCVLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSVSWAPAAAPGSVISATPSTGQIRRFVTGGSD 188
BLAST of FC931467 vs. ExPASy Swiss-Prot
Match: SEC13_SCHPO (Protein transport protein sec13 OS=Schizosaccharomyces pombe GN=sec13 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.099e-45 Identity = 88/180 (48.89%), Postives = 116/180 (64.44%), Query Frame = 1 Query: 97 IETGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKE-GNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGSGFLDPVQKLCSGGCD 633 ++T H+D +HD +DYYGKRLAT SSD +IK+ + NN L L GH G VW++ WAHPKFG+ILAS S+DG VI+W+E G + DH H++SVN++ WAPHE G LAC SSDG +SV + DG DT RI AH G +V W+P + G++VG +KL + GCD Sbjct: 4 VDTQHDDMIHDAILDYYGKRLATCSSDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAHPKFGTILASASYDGHVIVWRETGGVWSELMDHT--AHQASVNAVSWAPHEYGALLACASSDGKVSVLEFKDDGSCDT-RIFTAHEPGCNAVCWSPPSLSGSVVGQSPAAGPKKLATAGCD 180
BLAST of FC931467 vs. ExPASy Swiss-Prot
Match: SEC13_ASPNC (Protein transport protein sec13 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sec13 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.903e-45 Identity = 88/170 (51.76%), Postives = 114/170 (67.06%), Query Frame = 1 Query: 103 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSN--------EWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 588 +GH++ +HD +DYYG+RLAT SSD +IKI + T + + L GH+GAVW VAWAHPKFG+ILAS S+DG V+IW+E + N W K F H +SVN + WAPHE G LAC SSDG++SV R D W T +I AH +GV S+SWAP+ APG+L+ S Sbjct: 9 SGHDEMIHDAGLDYYGRRLATCSSDKTIKIFEIEGETHRLIETLKGHEGAVWCVAWAHPKFGTILASSSYDGKVLIWREQHQNATSPVAGGAWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVLEFR-DNSW-THQIFHAHGMGVNSISWAPAAAPGSLISS 176
BLAST of FC931467 vs. ExPASy Swiss-Prot
Match: SEC13_NEUCR (Protein transport protein sec-13 OS=Neurospora crassa GN=sec-13 PE=3 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 2.008e-44 Identity = 84/162 (51.85%), Postives = 111/162 (68.52%), Query Frame = 1 Query: 103 TGHEDTVHDVAMDYYGKRLATASSDYSIKIIGVGNNTSQHLAKLSGHKGAVWEVAWAHPKFGSILASCSFDGTVIIWKEGNSNEWIKDHVFEDHKSSVNSIDWAPHELGLCLACGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPSTAPGALVGS 588 +GH+D +HD +DYYG+RLAT SSD +IKI + + + + L GH GAVW VAWAHPK+G+ILAS +DG V+IW+E + W + F HK+SVN + W+PHE G LAC SSDGN+SV + D W+ I AH +GV SVSWAP+T PG++V S Sbjct: 11 SGHDDMIHDAVLDYYGRRLATCSSDRTIKIFEIEGESQRLVETLKGHDGAVWSVAWAHPKYGNILASAGYDGKVLIWRE-QAGSWQRIFDFALHKASVNIVSWSPHEAGCLLACASSDGNVSVLEFK-DNSWE-HNIFHAHGLGVNSVSWAPATTPGSIVSS 169 The following BLAST results are available for this feature:
BLAST of FC931467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931467 ID=FC931467; Name=FC931467; organism=Citrus clementina; type=EST; length=703bpback to top |